prot_Ecto-sp13_S_contig56349.15974.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig56349.15974.1
Unique Nameprot_Ecto-sp13_S_contig56349.15974.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length133
Homology
BLAST of mRNA_Ecto-sp13_S_contig56349.15974.1 vs. uniprot
Match: A0A6H5L214_9PHAE (Plug_translocon domain-containing protein n=3 Tax=PX clade TaxID=569578 RepID=A0A6H5L214_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 9.140e-81
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0
Query:    1 DLSTLGAGNAILIICQLFFAGLIVIILDELLQKGYGLGSGISLFIATNICETIIWKAFSPTTINTGRGTEFEGAIIALFHLMITRPDKMRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVR 130
            DLSTLGAGNAILIICQLFFAGLIVIILDELLQKGYGLGSGISLFIATNICETIIWKAFSPTTINTGRGTEFEGAIIALFHLMITRPDKMRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPV+
Sbjct:  138 DLSTLGAGNAILIICQLFFAGLIVIILDELLQKGYGLGSGISLFIATNICETIIWKAFSPTTINTGRGTEFEGAIIALFHLMITRPDKMRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVK 267          
BLAST of mRNA_Ecto-sp13_S_contig56349.15974.1 vs. uniprot
Match: A0A7S2XXJ1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXJ1_9STRA)

HSP 1 Score: 237 bits (605), Expect = 2.610e-74
Identity = 117/130 (90.00%), Postives = 126/130 (96.92%), Query Frame = 0
Query:    1 DLSTLGAGNAILIICQLFFAGLIVIILDELLQKGYGLGSGISLFIATNICETIIWKAFSPTTINTGRGTEFEGAIIALFHLMITRPDKMRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVR 130
            DL TLGAGNAILII QLFFAGLIVIILDELLQKGYGLGSGISLFIATNICETI+WKAFSPTTINTGRGTEFEGAIIALFHL+ITR DK+RAL+EAFYRQNLPN+TNL+AT LVF++VIYFQGWRVDLPV+
Sbjct:  138 DLGTLGAGNAILIIAQLFFAGLIVIILDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTINTGRGTEFEGAIIALFHLLITRSDKVRALKEAFYRQNLPNLTNLMATVLVFVIVIYFQGWRVDLPVK 267          
BLAST of mRNA_Ecto-sp13_S_contig56349.15974.1 vs. uniprot
Match: A0A4D9D8Z0_9STRA (Plug_translocon domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8Z0_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.300e-71
Identity = 115/131 (87.79%), Postives = 123/131 (93.89%), Query Frame = 0
Query:    1 DLSTLGAGNAILIICQLFFAGLIVIILDELLQKGYGLGSGISLFIATNICETIIWKAFSPTTINTGRGTEFEGAIIALFHLMITRPDKMRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVRG 131
            DL++LG GNAILII QLF AG+IVI LDELLQKGYGLGSGISLFIATNICE IIWKAFSPTTINTGRGTEFEGAIIALFHL+ITR DKMRAL+EAFYRQNLPN+TNLLAT LVFI+VIYFQGWRVDLPV+ 
Sbjct:  140 DLNSLGWGNAILIIAQLFIAGMIVITLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINTGRGTEFEGAIIALFHLLITRSDKMRALKEAFYRQNLPNVTNLLATVLVFIIVIYFQGWRVDLPVKS 270          
BLAST of mRNA_Ecto-sp13_S_contig56349.15974.1 vs. uniprot
Match: A0A6V2TM26_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2TM26_HETAK)

HSP 1 Score: 229 bits (585), Expect = 2.590e-71
Identity = 110/130 (84.62%), Postives = 125/130 (96.15%), Query Frame = 0
Query:    1 DLSTLGAGNAILIICQLFFAGLIVIILDELLQKGYGLGSGISLFIATNICETIIWKAFSPTTINTGRGTEFEGAIIALFHLMITRPDKMRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVR 130
            DL+TLGAGNA+LII QLFFAGL+V++LDELLQKGYGLGSGISLFIATNICETI+WKAFSPTTINTGRGTEFEGA+IALFHL++TR DK RA++EAFYRQNLPN+TNL+AT  VFI+VIYFQGWRVDLPV+
Sbjct:  138 DLATLGAGNALLIITQLFFAGLVVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLVLTRGDKARAVKEAFYRQNLPNLTNLMATVFVFIIVIYFQGWRVDLPVK 267          
BLAST of mRNA_Ecto-sp13_S_contig56349.15974.1 vs. uniprot
Match: A0A7S4MCE0_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S4MCE0_9STRA)

HSP 1 Score: 228 bits (582), Expect = 7.290e-71
Identity = 111/130 (85.38%), Postives = 124/130 (95.38%), Query Frame = 0
Query:    1 DLSTLGAGNAILIICQLFFAGLIVIILDELLQKGYGLGSGISLFIATNICETIIWKAFSPTTINTGRGTEFEGAIIALFHLMITRPDKMRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVR 130
            DL+T+GAGNA+LII QLFFAGLIV+ LDELLQKGYGLGSGISLFIATNICE I+WKAFSPTT+NTGRGTEFEGAIIALFHL+ITR DK+RAL+EA YRQNLPN+TNL+AT LVF+VVIYFQGWRVDLPV+
Sbjct:  138 DLATIGAGNALLIISQLFFAGLIVLTLDELLQKGYGLGSGISLFIATNICENIVWKAFSPTTLNTGRGTEFEGAIIALFHLLITRTDKVRALKEALYRQNLPNLTNLMATVLVFVVVIYFQGWRVDLPVK 267          
BLAST of mRNA_Ecto-sp13_S_contig56349.15974.1 vs. uniprot
Match: A0A7S1D8Y6_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D8Y6_CYCTE)

HSP 1 Score: 224 bits (572), Expect = 1.180e-70
Identity = 109/130 (83.85%), Postives = 122/130 (93.85%), Query Frame = 0
Query:    1 DLSTLGAGNAILIICQLFFAGLIVIILDELLQKGYGLGSGISLFIATNICETIIWKAFSPTTINTGRGTEFEGAIIALFHLMITRPDKMRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVR 130
            DL ++GAGNAILII QLF AGLIV+ LDELLQKGYGLGSGISLFIATNICE I+WKAFSPTTINTGRGTEFEGAIIALFHL+ITR DK+RAL+EA YRQNLPN+TNL+AT L+F++VIYFQGWRVDLPV+
Sbjct:  144 DLGSIGAGNAILIIAQLFCAGLIVLTLDELLQKGYGLGSGISLFIATNICENIVWKAFSPTTINTGRGTEFEGAIIALFHLLITRKDKVRALREALYRQNLPNLTNLMATVLIFVIVIYFQGWRVDLPVK 273          
BLAST of mRNA_Ecto-sp13_S_contig56349.15974.1 vs. uniprot
Match: A0A6G0WJK2_9STRA (Plug_translocon domain-containing protein n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A6G0WJK2_9STRA)

HSP 1 Score: 224 bits (572), Expect = 2.460e-69
Identity = 110/130 (84.62%), Postives = 124/130 (95.38%), Query Frame = 0
Query:    1 DLSTLGAGNAILIICQLFFAGLIVIILDELLQKGYGLGSGISLFIATNICETIIWKAFSPTTINTGRGTEFEGAIIALFHLMITRPDKMRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVR 130
            D+  +GAGNAILII QLFFAG+++IILDE+LQKGYGLGSGISLFIATNICE+I+WKAFSPTTINTGRGTEFEGAIIA+FHL+ITR DK RAL+EAFYRQNLPN+TNLLAT LVFIVVIYFQG+RVDLPV+
Sbjct:  138 DIGEIGAGNAILIIIQLFFAGILIIILDEMLQKGYGLGSGISLFIATNICESIVWKAFSPTTINTGRGTEFEGAIIAVFHLLITRSDKARALKEAFYRQNLPNLTNLLATVLVFIVVIYFQGFRVDLPVK 267          
BLAST of mRNA_Ecto-sp13_S_contig56349.15974.1 vs. uniprot
Match: A0A8J5XI08_DIALT (Plug_translocon domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XI08_DIALT)

HSP 1 Score: 224 bits (570), Expect = 5.400e-69
Identity = 110/130 (84.62%), Postives = 123/130 (94.62%), Query Frame = 0
Query:    1 DLSTLGAGNAILIICQLFFAGLIVIILDELLQKGYGLGSGISLFIATNICETIIWKAFSPTTINTGRGTEFEGAIIALFHLMITRPDKMRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVR 130
            D+  LGAGNA+LII QLF AGLIVIILDELLQKGYGLGSGISLFIATNICETI+WK+FSPTTINTGRGTEFEGA+IALFHL+ITR DK+RAL+EAFYRQNLPN+TNL+AT LVF+ VIYFQG+RVDLPV+
Sbjct:  143 DVRELGAGNAVLIIIQLFIAGLIVIILDELLQKGYGLGSGISLFIATNICETIVWKSFSPTTINTGRGTEFEGAVIALFHLLITRTDKVRALKEAFYRQNLPNVTNLMATVLVFVFVIYFQGFRVDLPVK 272          
BLAST of mRNA_Ecto-sp13_S_contig56349.15974.1 vs. uniprot
Match: A0A482RU87_9ARCH (Preprotein translocase subunit SecY n=2 Tax=cellular organisms TaxID=131567 RepID=A0A482RU87_9ARCH)

HSP 1 Score: 221 bits (564), Expect = 5.410e-69
Identity = 109/130 (83.85%), Postives = 123/130 (94.62%), Query Frame = 0
Query:    1 DLSTLGAGNAILIICQLFFAGLIVIILDELLQKGYGLGSGISLFIATNICETIIWKAFSPTTINTGRGTEFEGAIIALFHLMITRPDKMRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVR 130
            DL+TLGAGNAILII QLF AG++VIILDELLQKGYGLGSGISLFIATNICE+IIWKAFSPTTINTGRGTEFEGAIIAL HLMITR +K+RAL+EAF R NLPN+TNL++T L+F++VIYFQGWRVDLPV+
Sbjct:   65 DLATLGAGNAILIILQLFAAGMVVIILDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINTGRGTEFEGAIIALIHLMITRQNKVRALKEAFNRSNLPNLTNLISTVLIFLIVIYFQGWRVDLPVK 194          
BLAST of mRNA_Ecto-sp13_S_contig56349.15974.1 vs. uniprot
Match: A0A176VKS7_MARPO (Plug_translocon domain-containing protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176VKS7_MARPO)

HSP 1 Score: 219 bits (557), Expect = 7.260e-69
Identity = 110/133 (82.71%), Postives = 121/133 (90.98%), Query Frame = 0
Query:    1 DLSTLGAGNAILIICQLFFAGLIVIILDELLQKGYGLGSGISLFIATNICETIIWKAFSPTTINTGRGTEFEGAIIALFHLMITRPDKMRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVRGLS 133
            D+  LGAGNAILII QLFFAG+IVI LDELLQKGYGLGSGISLFIATNICE IIWKAFSPTTIN+GRG EFEGA+IALFHL+ITR DK+RAL+EAFYR NLPN+TNLLAT LVF++VIYFQG+RV LPVR  S
Sbjct:  143 DVRNLGAGNAILIIVQLFFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALKEAFYRTNLPNVTNLLATVLVFLIVIYFQGFRVVLPVRSRS 275          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56349.15974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L214_9PHAE9.140e-8199.23Plug_translocon domain-containing protein n=3 Tax=... [more]
A0A7S2XXJ1_9STRA2.610e-7490.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D8Z0_9STRA1.300e-7187.79Plug_translocon domain-containing protein n=2 Tax=... [more]
A0A6V2TM26_HETAK2.590e-7184.62Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S4MCE0_9STRA7.290e-7185.38Hypothetical protein n=2 Tax=Bacillariophyta TaxID... [more]
A0A7S1D8Y6_CYCTE1.180e-7083.85Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A6G0WJK2_9STRA2.460e-6984.62Plug_translocon domain-containing protein n=10 Tax... [more]
A0A8J5XI08_DIALT5.400e-6984.62Plug_translocon domain-containing protein n=1 Tax=... [more]
A0A482RU87_9ARCH5.410e-6983.85Preprotein translocase subunit SecY n=2 Tax=cellul... [more]
A0A176VKS7_MARPO7.260e-6982.71Plug_translocon domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002208SecY/SEC61-alpha familyPFAMPF00344SecYcoord: 8..130
e-value: 2.2E-19
score: 69.9
IPR002208SecY/SEC61-alpha familyPANTHERPTHR10906SECY/SEC61-ALPHA FAMILY MEMBERcoord: 3..131
IPR023201SecY domain superfamilyGENE3D1.10.3370.10coord: 1..132
e-value: 3.5E-44
score: 153.2
IPR023201SecY domain superfamilySUPERFAMILY103491Preprotein translocase SecY subunitcoord: 5..130
NoneNo IPR availablePANTHERPTHR10906:SF28coord: 3..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 56..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..83
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 124..133
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..55
NoneNo IPR availableTMHMMTMhelixcoord: 101..123
NoneNo IPR availableTMHMMTMhelixcoord: 37..59
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR030659SecY conserved sitePROSITEPS00756SECY_2coord: 26..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig56349contigEcto-sp13_S_contig56349:1..835 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig56349.15974.1mRNA_Ecto-sp13_S_contig56349.15974.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig56349 1..835 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig56349.15974.1 ID=prot_Ecto-sp13_S_contig56349.15974.1|Name=mRNA_Ecto-sp13_S_contig56349.15974.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=133bp
DLSTLGAGNAILIICQLFFAGLIVIILDELLQKGYGLGSGISLFIATNIC
ETIIWKAFSPTTINTGRGTEFEGAIIALFHLMITRPDKMRALQEAFYRQN
LPNITNLLATALVFIVVIYFQGWRVDLPVRGLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002208SecY/SEC61-alpha
IPR023201SecY_dom_sf
IPR030659SecY_CS