prot_Ecto-sp13_S_contig562.15959.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig562.15959.1
Unique Nameprot_Ecto-sp13_S_contig562.15959.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length606
Homology
BLAST of mRNA_Ecto-sp13_S_contig562.15959.1 vs. uniprot
Match: D8LFG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG8_ECTSI)

HSP 1 Score: 775 bits (2002), Expect = 1.030e-273
Identity = 479/613 (78.14%), Postives = 508/613 (82.87%), Query Frame = 0
Query:    1 MLSLQQTPPSATSTAAEPSSLRPTSKTTTSPFRVKVPAAAPSWGFKVSLPTMPTFGTSSGDNVFSFYGPASP---GTITDGQSEAADEPRSRAKKRTKSRRADPAVSGATATTVAVDLKAELRAESEKAAMLPSPPQRAKXXXXXXXAISGDVAAAPKYVAPAPLYEPAEEGVTSSTTPAKGVAAVVPGIGAGGEEKSGAGLEGVTAAARASLEKLDMRHVSQQVKPFTDKLGSASEAGVAAVLEQGRARLENLQAEADRVSAQVASPVADKLSTVSRLSEAFGRGRDGVLEAVGGAGRAVDQGLSSVSSRSAVVVDGLPALKGST-----QILETSGRALSRATGTAGEIFEKMSGGLADLAGRGPDILARVRSISAQLFSSDDQEGGLVGGITAXXXXXXXXXXXXXXXXXXXXXXRSXXXXDGGGVAEKGADGIGASSSAGRRGDTVVEKGEERRLQPIGGXXXXXXXXXXXXXXXXXXXXWDXXXXXXXXXXXGEGEVLQPVGVRLETGATNEGERYGEEAMSASSTLWDMIRGSGTGAGDAVREVSEEDLLERAAQLGRELRETAEGLEVLKHEVSSLRESIRESDLEGRARAIGERLASTLEGKTTS 605
            MLSLQQTPPSAT  AAEPSS+RPTSKTT+SPFRV+VPAAAPSWGFKVSLP MPTFGT+  DNV +  GPAS    G ITDGQ EAADEPRSRAKK                      LKAELRAESEKAA+LPSPPQRAK       AISGDVAAAPKYVAPAPLYEPAEEGVTSST+PAKGVA  VPG+GAGGEEKSG GLEGVTAAARASLEKLD+R VSQQVKPFT+K+GSASEAGVAAVLEQGRA LENLQAEADR+SAQVASPVADKLS  SRLSEAFGRGRDGVL+AVG AGRAVDQG+S+VSSRSAVVVDGLPALKG T     ++LETSGRALSRATGTAGEI +KMSGGLADLAGRGPDILARVRSISA+LFSSDDQ+GGLVGG+TA    XXXXXXXXXXXXXXX         DGGGVAE GA+GI AS +AGRRGD VVE+GEERRLQPIGG                    W        XXXX  GEVLQPVGV+LETGATN+GERYGEEAMSASSTLWDMIRGSGTGAGDAVREVSEEDLLERAA+LG+ELRETAEGLEVLKHEVSSLRESIRESDLEGRARA+GERLASTLEGKTTS
Sbjct:  152 MLSLQQTPPSATRAAAEPSSVRPTSKTTSSPFRVEVPAAAPSWGFKVSLPAMPTFGTTGRDNVVALTGPASQKGQGPITDGQPEAADEPRSRAKKXXXXXXXXXXXXXXXXXXXXXXLKAELRAESEKAALLPSPPQRAKQQRQQPPAISGDVAAAPKYVAPAPLYEPAEEGVTSSTSPAKGVAEGVPGVGAGGEEKSGGGLEGVTAAARASLEKLDLRDVSQQVKPFTEKVGSASEAGVAAVLEQGRASLENLQAEADRISAQVASPVADKLSAGSRLSEAFGRGRDGVLKAVGEAGRAVDQGVSAVSSRSAVVVDGLPALKGQTSGLSARLLETSGRALSRATGTAGEISKKMSGGLADLAGRGPDILARVRSISARLFSSDDQDGGLVGGVTAEGAAXXXXXXXXXXXXXXXTAIGRSGSGDGGGVAETGAEGIAASGNAGRRGDAVVEQGEERRLQPIGGGEGGNGVAPGEG--------WRDGEEAEEXXXXXXGEVLQPVGVKLETGATNDGERYGEEAMSASSTLWDMIRGSGTGAGDAVREVSEEDLLERAAELGKELRETAEGLEVLKHEVSSLRESIRESDLEGRARAVGERLASTLEGKTTS 756          
BLAST of mRNA_Ecto-sp13_S_contig562.15959.1 vs. uniprot
Match: A0A6H5KCP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP9_9PHAE)

HSP 1 Score: 693 bits (1788), Expect = 8.630e-239
Identity = 477/618 (77.18%), Postives = 509/618 (82.36%), Query Frame = 0
Query:    1 MLSLQQTPPSATSTAAEPSSLRPTSKTTTSPFRVKVPAAAPSWGFKVSLPTMPTFGTSSGDNVFSFYGPASPGTITDGQSEAADEPRSRAKKRTKSRRADPAVSGATATTVAVDLKAELRAESEKAAMLPSPPQRAKXXXXXXX-----AISGDVAAAPKYVAPAPLYEPAEEGVTSSTTPAKGVAAVVPGIGAGGEEKSGAGLEGVTAAARASLEKLDMRHVSQQVKPFTDKLGSASEAGVAAVLEQGRARLENLQAEADRVSAQVASPVADKLSTVSRLSEAFGRGRDGVLEAVGGAGRAVDQGLSSVSSRSAVVVDGLPALKGST--------QILETSGRALSRATGTAGEIFEKMSGGLADLAGRGPDILARVRSISAQLFSSDDQEGGLVGGITAXXXXXXXXXXXXXXXXXXXXXXRSXXXXDGGGVAEKGADGIGASSSAGRRGDTVVEKGEERRLQPIGGXXXXXXXXXXXXXXXXXXXXWDXXXXXXXXXXXGEGEVLQPVGVRLETGATNEGERYGEEAMSASSTLWDMIRGSGTGAGDAVREVSEEDLLERAAQLGRELRETAEGLEVLKHEVSSLRESIRESDLEGRARAIGERLASTLEGKTTS 605
            MLSLQQTPPSATSTAAEPSSLRPTSK T+SPFRVK PAAAPSWGFKVSLP  PTFGT++G                DGQ EAADEPRS+AKKRTKSRRAD AVSGA+A+T AVDLKAELRAESEKAA+LPSP     XXXXXXX      +SGDVA APKYVAPAPLYEPAEE +TS+T+PAKG+AA VPGIGAGGEEKS AGLEGVT AARASLEKLD+R VSQQV+PFT+K+GSASEAGVAAVLEQ RA   NLQAE DR+SAQVA PVADKLS   RLSEAFGRGRD VL+AVG  GRAVDQG+S+VSSRSAVVVDGLPALKG          Q+LET GRALS   GTAGEI++K+SGGLADLAGR PDILARV SISAQLFSSDD+ GG+       XXXXXXXXXXXXXXXXXX   RS    DGGGVAE GA+GIGAS +AGRRG   VE+GEERRLQPIGG  XXXXXXXXXXXXXXXXXX  XXXXX       EGEVLQPVGV+LETGATNEGERYGE+AMSASSTLWDMIRGSGTGAGDAVREVSEEDLLERAAQLGR+LRETAEGLEVLKHEVS LRESIRESDLEG         ASTLEGKTTS
Sbjct:  342 MLSLQQTPPSATSTAAEPSSLRPTSKATSSPFRVKAPAAAPSWGFKVSLPATPTFGTAAGQ---------------DGQPEAADEPRSKAKKRTKSRRADAAVSGASASTAAVDLKAELRAESEKAALLPSPXXXXXXXXXXXXXXXXXVVSGDVAGAPKYVAPAPLYEPAEERITSTTSPAKGLAAGVPGIGAGGEEKSDAGLEGVTVAARASLEKLDLRDVSQQVEPFTEKVGSASEAGVAAVLEQARASXXNLQAEVDRISAQVAPPVADKLSAGGRLSEAFGRGRDVVLKAVGETGRAVDQGVSAVSSRSAVVVDGLPALKGQASGLSARCPQLLETWGRALS---GTAGEIYDKISGGLADLAGREPDILARVGSISAQLFSSDDRFGGVS---AEAXXXXXXXXXXXXXXXXXXTIGRSRSSGDGGGVAETGAEGIGASGNAGRRGGATVEQGEERRLQPIGGAGXXXXXXXXXXXXXXXXXXXXXXXXX-------EGEVLQPVGVKLETGATNEGERYGEDAMSASSTLWDMIRGSGTGAGDAVREVSEEDLLERAAQLGRKLRETAEGLEVLKHEVSLLRESIRESDLEGXXXXXXXXXASTLEGKTTS 931          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig562.15959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFG8_ECTSI1.030e-27378.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCP9_9PHAE8.630e-23977.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 565..585
NoneNo IPR availableCOILSCoilCoilcoord: 241..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig562contigEcto-sp13_S_contig562:17955..24191 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig562.15959.1mRNA_Ecto-sp13_S_contig562.15959.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig562 16611..24209 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig562.15959.1 ID=prot_Ecto-sp13_S_contig562.15959.1|Name=mRNA_Ecto-sp13_S_contig562.15959.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=606bp
MLSLQQTPPSATSTAAEPSSLRPTSKTTTSPFRVKVPAAAPSWGFKVSLP
TMPTFGTSSGDNVFSFYGPASPGTITDGQSEAADEPRSRAKKRTKSRRAD
PAVSGATATTVAVDLKAELRAESEKAAMLPSPPQRAKQQQQPPPAISGDV
AAAPKYVAPAPLYEPAEEGVTSSTTPAKGVAAVVPGIGAGGEEKSGAGLE
GVTAAARASLEKLDMRHVSQQVKPFTDKLGSASEAGVAAVLEQGRARLEN
LQAEADRVSAQVASPVADKLSTVSRLSEAFGRGRDGVLEAVGGAGRAVDQ
GLSSVSSRSAVVVDGLPALKGSTQILETSGRALSRATGTAGEIFEKMSGG
LADLAGRGPDILARVRSISAQLFSSDDQEGGLVGGITAEAAAAAAVAVAV
VGGGAAAAIGRSGSSGDGGGVAEKGADGIGASSSAGRRGDTVVEKGEERR
LQPIGGGGGGGGGGGGGNGVAAGEGGWDGEEAEEEEEEEGEGEVLQPVGV
RLETGATNEGERYGEEAMSASSTLWDMIRGSGTGAGDAVREVSEEDLLER
AAQLGRELRETAEGLEVLKHEVSSLRESIRESDLEGRARAIGERLASTLE
GKTTS*
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