mRNA_Ecto-sp13_S_contig1186.1593.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1186.1593.1 vs. uniprot
Match: D8LEJ9_ECTSI (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ9_ECTSI) HSP 1 Score: 839 bits (2167), Expect = 3.520e-296 Identity = 435/470 (92.55%), Postives = 444/470 (94.47%), Query Frame = 3
Query: 213 DFHANEAAAAAGATXXXA-GGTCRPSNVGILAMDMYFPRSYVEQSDLEKTDGCEGKYTVGLGQNKLAFVDDREDINSVLMTVMQSLLEKYDIDAAKIGRLEVGTETLLDKSKSAKTWLMPLLGESNTDVEGVTSYNACYGGSAALFNSVAWVESSEWDGRYALVVCGDIAVYEAGPARPTGGCGAVAMLVGPDAPLVLEPGLRSTHARDAYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYAGFRAKAAARQDRLVAS-GVTQSGGATTPPAAVTVDSFDFVSLHAPYNKLVQKGFARMSFLDFRSDPSAEGFRDLPAAAAEGWRTVELEGTYADREIDAAFRKASAGDFKARCLPASTVSREVGNCYTASVFAGLVSVVADKGSAMEDGGGARVFMFSYGSGFIATAYSFKARRPTTCRGQFSLGGMQKAMGIKDRLAKRLGRTPEDFAQARRIG--THSR--YEPEGA 1604
+FHANEAA XXX GGTCRPSNVGILAMDMYFPRSYVEQSDLEKTDGCEGKYTVGLGQNKLAFVDDREDINSVLMTVMQSLLEKYDID AKIGRLEVGTETLLDKSKSAKTWLMPLLGESNTDVEGVTSYNACYGGSAALFNSVAWVESSEWDGRYALVVCGDIAVYEAGPARPTGGCGAVAMLVGPDAPLVLEPGLRSTH+RDAYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYAGFRAKAAARQ+RL AS GVTQSGGATTPPAAVTVDSFDFVSLHAPYNKLVQKGFARMSFLDFRSDPSAEGFRDLPAAAAEGWRTVEL GTYADREIDAAFRKASAG+FKARCLPASTVSREVGNCYTASVFAGLVSVVADKG+A+EDGGGARVFMFSYGSGFIATAYSFKARR TTCRGQFSLGGMQKAM IKDRLA RLGR PEDFAQA + T+ + Y P GA
Sbjct: 3 EFHANEAAXXXXXXXXXXXGGTCRPSNVGILAMDMYFPRSYVEQSDLEKTDGCEGKYTVGLGQNKLAFVDDREDINSVLMTVMQSLLEKYDIDPAKIGRLEVGTETLLDKSKSAKTWLMPLLGESNTDVEGVTSYNACYGGSAALFNSVAWVESSEWDGRYALVVCGDIAVYEAGPARPTGGCGAVAMLVGPDAPLVLEPGLRSTHSRDAYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYAGFRAKAAARQERLAASSGVTQSGGATTPPAAVTVDSFDFVSLHAPYNKLVQKGFARMSFLDFRSDPSAEGFRDLPAAAAEGWRTVELGGTYADREIDAAFRKASAGEFKARCLPASTVSREVGNCYTASVFAGLVSVVADKGTALEDGGGARVFMFSYGSGFIATAYSFKARRSTTCRGQFSLGGMQKAMAIKDRLANRLGRRPEDFAQAMNLREQTYGKAGYTPSGA 472
BLAST of mRNA_Ecto-sp13_S_contig1186.1593.1 vs. uniprot
Match: A0A6H5JY59_9PHAE (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY59_9PHAE) HSP 1 Score: 787 bits (2033), Expect = 2.970e-276 Identity = 403/440 (91.59%), Postives = 412/440 (93.64%), Query Frame = 3
Query: 339 QSDLEKTDGCEGKYTVGLGQNKLAFVDDREDINSVLMTVMQSLLEKYDIDAAKIGRLEVG-----TETLLDKSKSAKTWLMPLLGESNTDVEGVTSYNACYGGSAALFNSVAWVESSEWDGRYALVVCGDIAVYEAGPARPTGGCGAVAMLVGPDAPLVLEPGLRSTHARDAYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYAGFRAKAAARQDRLVASGVTQSGGATTPPAAVTVDSFDFVSLHAPYNKLVQKGFARMSFLDFRSDPSAEGFRDLPAAAAEGWRTVELEGTYADREIDAAFRKASAGDFKARCLPASTVSREVGNCYTASVFAGLVSVVADKGSAMEDGGGARVFMFSYGSGFIATAYSFKARRPTTCRGQFSLGGMQKAMGIKDRLAKRLGRTPEDFAQARR-IGTHSRYEPEGADVREGWVYPKRG 1640
QSDLEKTDGCEGKYT+GLGQNKLAFVDDREDINSVLMTVMQSLLEKYDID AKIGRLEVG TETLLDKSKSAKTWLMPLLG SNTDVEGVTSYNACYGGSAALFNSVAWVESSEWDGRYALVVCGDIAVYEAGPARPTGGCGAVAMLVGPDAPLVLEPGLRSTH+RDAYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYAGF+AKAAARQDRL ASGVTQSGG TTPPA VTVDSFDFVSLHAPYNKLVQKGFARMSFLDFRSDPSAEGFRDLPAAAAEGWRTVEL GTYADREI+AAFRKASAGDFKARCLPASTVSREVGNCYTASVFAGLVSVVADKG+A+EDGGGARVFMFSYGSGFIATAYSFKARRPTTCRGQFSLGGMQ+AMGIKDRLA+RLGRTPEDFAQA R G HS Y+ A Y K G
Sbjct: 8 QSDLEKTDGCEGKYTIGLGQNKLAFVDDREDINSVLMTVMQSLLEKYDIDPAKIGRLEVGKEWVGTETLLDKSKSAKTWLMPLLGASNTDVEGVTSYNACYGGSAALFNSVAWVESSEWDGRYALVVCGDIAVYEAGPARPTGGCGAVAMLVGPDAPLVLEPGLRSTHSRDAYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYAGFKAKAAARQDRLAASGVTQSGGVTTPPATVTVDSFDFVSLHAPYNKLVQKGFARMSFLDFRSDPSAEGFRDLPAAAAEGWRTVELGGTYADREIEAAFRKASAGDFKARCLPASTVSREVGNCYTASVFAGLVSVVADKGTALEDGGGARVFMFSYGSGFIATAYSFKARRPTTCRGQFSLGGMQEAMGIKDRLARRLGRTPEDFAQASRPFGGHSFYDVTTAMNLREQTYGKAG 447
BLAST of mRNA_Ecto-sp13_S_contig1186.1593.1 vs. uniprot
Match: A0A7S2WPZ4_9STRA (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPZ4_9STRA) HSP 1 Score: 480 bits (1235), Expect = 1.020e-156 Identity = 250/428 (58.41%), Postives = 313/428 (73.13%), Query Frame = 3
Query: 279 RPSNVGILAMDMYFPRSYVEQSDLEKTDGCEGKYTVGLGQNKLAFVDDREDINSVLMTVMQSLLEKYDIDAAKIGRLEVGTETLLDKSKSAKTWLMPLLGESNTDVEGVTSYNACYGGSAALFNSVAWVESSEWDGRYALVVCGDIAVYEAGPARPTGGCGAVAMLVGPDAPLVLEPGLRSTHARDAYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYAGFRAKAAARQDRLVASGVTQSGGATTPPAAVTVDSFDFVSLHAPYNKLVQKGFARMSFLDFRSDPSAEGFRDLPAAAAEGWRTVELEGTYADREIDAAFRKASAGDFKARCLPASTVSREVGNCYTASVFAGLVSVVADKGSAMEDGGGARVFMFSYGSGFIATAYSFKARRPTTCRGQFSLGGMQKAMGIKDRLAKRLGRTPEDFAQA 1562
RPSNVGILAM+ YFP +V+Q+ LE DGC GKYT GLGQN+LAFV DREDI SVLMT +Q LLE++ +D A +GRLEVGTE+L+DKSKS KT LM L GE N D+EGVTS NACYGG+AAL NSVAWV+S +WDGR A+ V GDIAVYEAGPARPT GCGAVAML+GPDAPL LEPGLR++H D YDFYKP HSEY VDG+LSQ+ YL VD CY G++AKAA R ++ VTVDSFD+V +H+PY+KLVQKGFAR ++DF DP+ EGF ++ + + V+ + RE+DAAFR+ SA ++ + LP+S VS+EVGNCYT +VF L+S+++D G M G RV MFSYGSG +++ YSF+ R P T +F+L +Q A+G++ RLA+R T E+FAQA
Sbjct: 7 RPSNVGILAMEAYFPTCFVDQTALEAQDGCAGKYTKGLGQNRLAFVTDREDIASVLMTAVQRLLERFGVDPAHVGRLEVGTESLIDKSKSVKTSLMRLFGE-NKDIEGVTSTNACYGGTAALLNSVAWVQSEDWDGRLAICVAGDIAVYEAGPARPTSGCGAVAMLIGPDAPLALEPGLRASHVIDCYDFYKPHHSEYPMVDGKLSQAAYLGCVDACYRGYKAKAARRGEK------------------VTVDSFDYVCMHSPYHKLVQKGFARFLYMDFLDDPTQEGFSEVQHLSGD---KVDYNASLESREVDAAFREVSASSYREKILPSSFVSKEVGNCYTGAVFMNLLSLISDVGPGMV---GKRVGMFSYGSGSVSSLYSFRGRIPDT-PSEFTLERIQ-AIGVRGRLAERKSCTSEEFAQA 407
BLAST of mRNA_Ecto-sp13_S_contig1186.1593.1 vs. uniprot
Match: F0XWE9_AURAN (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWE9_AURAN) HSP 1 Score: 439 bits (1130), Expect = 4.590e-141 Identity = 246/454 (54.19%), Postives = 304/454 (66.96%), Query Frame = 3
Query: 273 TCRPSNVGILAMDMYFPRSYVEQSDLEKTDGCEGKYTVGLGQNKLAFVDDREDINSVLMTVMQSLLEKYDIDAAKIGRLEVGTETLLDKSKSAKTWLMPLLGESNTDVEGVTSYNACYGGSAALFNSVAWVESSEWDGRYALVVCGDIAVYEAGPARPTGGCGAVAMLVGPDAPLVLEPGLRSTHARDAYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYAGFRAKAAARQDRLVASGVTQSGGATTPPAAVTVDSFDFVSLHAPYNKLVQKGFARMSFLDFRSDPSAEGFRDLPAAAAEGWRTVELEGTYADREIDAAFRKASAGDFKARCLPASTVSREVGNCYTASVFAGLVSVVADKGSAMEDGGGARVFMFSYGSGFIATAYSFKARRPTTCRGQFSLGGMQKAMGIKDRLAKRLGRTPEDFAQA-----RRIGTHSRYEPEGADVREG 1619
T RP+NVGILAM+ Y P++YV Q+ LE+ DGC GKY VGLGQ +AFVDDREDI SVL+T + LL + + A +GRLEVGTETL+DKSKS KT L+ L G+ + DVEGV+S NACYGG+AAL N+ AWVESS WDG+YA+VVCGDIAVYE GPARP+GGCGAVA+LVGP APL LEP R+THA D +DFYKP HSE+A VDG+LSQ+ YL SVD C+AG + KA PAA T+D+FD HAPYNKLVQKGFAR++ D D A D PAA E + ADR +DAA RKASAG + A+ PA+ + +++GN YTASVFAGL+S+VAD+G A+ G RV +FSYGSG +AT Y+FK R + F+LG ++ + RLA R + FA+A R G Y P GA +G
Sbjct: 4 TERPANVGILAMEWYAPQTYVAQTSLEEQDGCGGKYVVGLGQEAMAFVDDREDIGSVLLTACRRLLTGFGVAPADVGRLEVGTETLVDKSKSVKTTLLQLFGD-HRDVEGVSSVNACYGGTAALLNACAWVESSAWDGKYAVVVCGDIAVYEPGPARPSGGCGAVALLVGPGAPLALEPA-RATHAMDVWDFYKPHHSEFAAVDGKLSQACYLRSVDGCWAGLKRKA---------------------PAATTLDAFDHCVFHAPYNKLVQKGFARLALGD---DVLAGRVADPPAADWCAAGAAPYEASLADRGLDAALRKASAGAYDAKVAPATLIPKQIGNTYTASVFAGLLSLVADRGDALA---GKRVLLFSYGSGSVATMYAFKGREADDAK--FALGETRRVADVPARLAARAPCSAAHFARACDVRVERYGKPG-YAPTGAAETDG 425
BLAST of mRNA_Ecto-sp13_S_contig1186.1593.1 vs. uniprot
Match: A0A7S2AZ79_9STRA (Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZ79_9STRA) HSP 1 Score: 429 bits (1104), Expect = 7.680e-137 Identity = 241/463 (52.05%), Postives = 309/463 (66.74%), Query Frame = 3
Query: 279 RPSNVGILAMDMYFPRSYVEQSDLEKTDGCEGKYTVGLGQNKLAFVDDREDINSVLMTVMQSLLEKYDIDAAKIGRLEVGTETLLDKSKSAKTWLMPLLGESNTDVEGVTSYNACYGGSAALFNSVAWVESSEWDGRYALVVCGDIAVYEAGPARPTGGCGAVAMLVGPDAPLVLEPGLRSTHARDAYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYAGFRAKAAARQDRLVASGVTQSGGATTPPAAVTVDSFDFVSLHAPYNKLVQKGFARMSFLDFRSDPSAEGFRDLPAAAAEGWRTVELEGTYADREIDAAFRKASAGDFKARCLPASTVSREVGNCYTASVFAGLVSVVADKGSAMEDGG--GARVFMFSYGSGFIATAYSFKARRPTTCRGQFSLGGMQKAMGIKDRLAKRLGRTPEDFAQARRIGTHSRYE----PEG--ADVREGWVYPKRGD 1643
RPSNVGILAM++Y P S+V Q+ LE D C GKYT GLGQ +LAFV DREDI SV++T + LLE+Y I ++GRLEVGTETL+DKSKS KT LM LLG+ N DVEGV+S NACYGG+AALFNSVAWV+S +WDGRYA+V+ GDIAVYEAGPARPT GCG VAMLVG DAPL +EP +R++HA D YDFYKP HSEYA VDG LSQ YL VD CY F+AKA ++V +V ++ FDF+ H+PY+KLVQKGFAR+ + DF S P + FR+ ++ + + E + RE+DA FR + DF + P+S S++VGNCYT +VF L S+V SA+E G G R+ MFSYGSG +A+ Y+ KAR TT FSL +++ + +++RL R T E+F A + + + P G A ++EG Y +R D
Sbjct: 14 RPSNVGILAMELYIPDSFVPQTLLEVQDDCAGKYTKGLGQERLAFVTDREDITSVMLTALSRLLERYSITPEQVGRLEVGTETLIDKSKSVKTALMQLLGD-NGDVEGVSSTNACYGGTAALFNSVAWVQSEDWDGRYAVVLAGDIAVYEAGPARPTSGCGVVAMLVGSDAPLAMEPKVRASHAMDCYDFYKPNHSEYALVDGGLSQKAYLRCVDLCYNRFKAKA-----KVVLK-----------LESVEMNVFDFMCFHSPYHKLVQKGFARLGYQDFLSAPDSLRFREAADQLSQ-FSDLTDEDSLVSRELDAVFRGITKNDFARKVTPSSFTSQQVGNCYTGAVFMNLASLV----SAVESDGLVGKRIGMFSYGSGSVASLYALKARETTTGN-NFSLQRIRETLALEERLNSRTQMTAEEFGAAMDLRAEAYGKAPLVPSGSTASLKEGTFYLERID 453
BLAST of mRNA_Ecto-sp13_S_contig1186.1593.1 vs. uniprot
Match: A0A7S0NXG5_9EUKA (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NXG5_9EUKA) HSP 1 Score: 421 bits (1082), Expect = 8.610e-134 Identity = 231/431 (53.60%), Postives = 290/431 (67.29%), Query Frame = 3
Query: 273 TCRPSNVGILAMDMYFPRSYVEQSDLEKTDGCEGKYTVGLGQNKLAFVDDREDINSVLMTVMQSLLEKYDIDAAKIGRLEVGTETLLDKSKSAKTWLMPLLGESNTDVEGVTSYNACYGGSAALFNSVAWVESSEWDGRYALVVCGDIAVYEAGPARPTGGCGAVAMLVGPDAPLVLEPGLRSTHARDAYDFYKPK-HSEYAEVDGRLSQSVYLESVDKCYAGFRAKAAARQDRLVASGVTQSGGATTPPAA-VTVDSFDFVSLHAPYNKLVQKGFARMSFLDFRSDPSAEGFRDLPAAAAEGWRTVELEGTYADREIDAAFRKASAGDFKARCLPASTVSREVGNCYTASVFAGLVSVVADKGSAMEDGGGARVFMFSYGSGFIATAYSFKARRPTTCRG-------QFSLGGMQKAMGIKDRLAKRLGR 1538
T RP NVGILA + Y+P+++V Q++LEK DGCEGKYTVGLGQ LAF DDRED+ S+L+ + +LLEK+D+ +GRLEVGTETL+DKSKS KT L+ L + TD+EGV+S NACYGG+AAL NSVAWVESS WDGRYA+VVCGDIAVY GPARPTGG GAVAML+G DAPL L G R+THA + YDFYKP+ +EYA VDG+LSQ+ YL +VD C+AG + K +SGGA VT+DSFDFV LH+PYNKLVQKGFAR+ + DF + F + A+ WR + T DR+ + F + F A+C P+ T+SR VGNCYTA+V+ L+S+VA KGS ++ G RV +FSYGSG +ATA R G F+LG + + + I RLA R R
Sbjct: 3 THRPQNVGILAAECYWPKNFVPQTELEKADGCEGKYTVGLGQTALAFFDDREDVGSILLNAVANLLEKFDVSPHDVGRLEVGTETLIDKSKSIKTLLLSCLFDGCTDIEGVSSTNACYGGTAALLNSVAWVESSAWDGRYAIVVCGDIAVYAPGPARPTGGGGAVAMLIGADAPLALV-GPRATHAVEVYDFYKPRGDTEYATVDGKLSQAAYLTAVDMCWAGLKLK-------------LRSGGALYEREPDVTLDSFDFVCLHSPYNKLVQKGFARLLYGDFTEAADRDEF----SGDAQRWRELPAAETVNDRDAEKCFAALAKPRFAAKCAPSETISRHVGNCYTAAVYMNLLSLVAAKGSELQ---GKRVLVFSYGSGAVATALMVVGRGVEAPNGVGKAAGSTFTLGRLAETLDIDTRLAARTCR 412
BLAST of mRNA_Ecto-sp13_S_contig1186.1593.1 vs. uniprot
Match: A0A7S4B600_CHRCT (Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B600_CHRCT) HSP 1 Score: 414 bits (1065), Expect = 1.690e-131 Identity = 220/393 (55.98%), Postives = 277/393 (70.48%), Query Frame = 3
Query: 279 RPSNVGILAMDMYFPRSYVEQSDLEKTDGCEGKYTVGLGQNKLAFVDDREDINSVLMTVMQSLLEKYDIDAAKIGRLEVGTETLLDKSKSAKTWLMPLLGESNTDVEGVTSYNACYGGSAALFNSVAWVESSEWDGRYALVVCGDIAVYEAGPARPTGGCGAVAMLVGPDAPLVLEPGLRSTHARDAYDFYKPK-HSEYAEVDGRLSQSVYLESVDKCYAGFRAKAAARQDRLVASGVTQSGGATTPPAAVTVDSFDFVSLHAPYNKLVQKGFARMSFLDFRSDPSAEGFRDLPAAAAEGWRTVELEGTYADREIDAAFRKASAGDFKARCLPASTVSREVGNCYTASVFAGLVSVVADKGSAMEDGGGARVFMFSYGSGFIATAYSFKARRP 1454
RP +VGILA + Y P +YV Q+ LE DGCEGKYTVGLGQN +AF DDRED+ S+++ + +LL Y I+ +GRLEVGTETL+DK+KS KT L+ L E N+DVEGVTS NACYGG+AAL NSVAWVESS WDGRYALVV GDIAVY GPARPTGG GAVAML+GP+APL L G R+THA + YDFYKP+ +EYA VDG+LSQ+ YL +VD+C+AG + K + +G+ T P A VT+DSF+FV +H+PYNKLVQKGFAR+ + DF P + F A A+ W+ V + T +DRE + F S F A+C P+ +SREVGNCYTA+V+ L+++V+ GS +E G RV +FSYGSG +ATA R P
Sbjct: 15 RPPHVGILAAEWYSPATYVPQTLLETADGCEGKYTVGLGQNAMAFCDDREDVGSLMLNALANLLTNYSINPRDVGRLEVGTETLIDKAKSIKTTLIEHLFEGNSDVEGVTSINACYGGTAALLNSVAWVESSAWDGRYALVVMGDIAVYAPGPARPTGGAGAVAMLIGPNAPLALA-GPRATHATEVYDFYKPRGDTEYATVDGKLSQAAYLTAVDQCWAGLKTK--------MKAGLAM----TAPEANVTLDSFNFVCMHSPYNKLVQKGFARLVYGDFCDAPDDDKF----AGDAQRWKGVPPKDTVSDREAEKCFAALSKAHFGAKCSPSDGISREVGNCYTAAVYMNLLALVSTTGSKLE---GKRVLLFSYGSGAVATALCLVGRDP 387
BLAST of mRNA_Ecto-sp13_S_contig1186.1593.1 vs. uniprot
Match: A0A0M0J637_9EUKA (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J637_9EUKA) HSP 1 Score: 408 bits (1049), Expect = 9.110e-129 Identity = 237/470 (50.43%), Postives = 301/470 (64.04%), Query Frame = 3
Query: 279 RPSNVGILAMDMYFPRSYVEQSDLEKTDGCEGKYTVGLGQNKLAFVDDREDINSVLMTVMQSLLEKYDIDAAKIGRLEVGTETLLDKSKSAKTWLMPLLGESNTDVEGVTSYNACYGGSAALFNSVAWVESSEWDGRYALVVCGDIAVYEAGPARPTGGCGAVAMLVGPDAPLVLEPGLRSTHARDAYDFYKPK-HSEYAEVDGRLSQSVYLESVDKCYAGFRAKAAARQDRLVASGVTQSGGATTPPAAVTVDSFDFVSLHAPYNKLVQKGFARMSFLDFRSDPSAEGFRDLPAAAAEGWRTVELEGTYA--DREIDAAFRKASAGDFKARCLPASTVSREVGNCYTASVFAGLVSVVADKGSAMEDGGGARVFMFSYGSGFIATAYSFKARRPTTCRG----------QFSLGGMQKAMGIKDRLAKRLGRTPEDFA-----QARRIGTHSRYEPEG--ADVREGWVY 1628
RP NVGILAM+ YFP++ ++Q+ LE+ DGC+GKYT+GLGQ L + DDRED+ S+L+T + L+E Y I+ +IGRLEVGTETL+DKSKS KT L+ L N DVEGVTS NACYGG+AAL NSVAWVESS WDGRYA+VVCGDIAVY GPARPTGG GAVAML+G DAPL L G R THA + YDFYKPK +EYA VDG+LSQ YL +VD+CYAG +AK AA GG A T+D+F F +H+PY KLVQKGFARM D + P+ RD AA A+ + + ++ DR+ + RK SA + A CLPA +S VGNCYTA+V+ L+++V+ + + + D V FSYGSG +ATA+ KAR+P+ F++ + + + RLA R RT DFA +A R G S Y P G A++ G Y
Sbjct: 14 RPQNVGILAMEAYFPQNCLQQTALEEADGCKGKYTIGLGQESLGYFDDREDVASILLTALARLMENYGIEPQQIGRLEVGTETLIDKSKSVKTTLLAHLFGPNADVEGVTSTNACYGGTAALLNSVAWVESSAWDGRYAVVVCGDIAVYAPGPARPTGGGGAVAMLIGADAPLALS-GPRCTHAAEVYDFYKPKGDTEYATVDGKLSQEAYLTAVDRCYAGLQAKRAAAV-----------GG-----APCTLDAFGFACMHSPYAKLVQKGFARMLLADVIAQPT----RDEWAADADAQKVAAVPPAHSVNDRDTETVLRKLSATRYDAMCLPAGGISTRVGNCYTAAVYMNLLALVSSRAAELVDKE-PDVLCFSYGSGAVATAFVIKARKPSGTNALSGASGLPPVPFTIERIAQTADVFARLASRTERTTADFAAAMDLRATRYGQAS-YSPTGPIAELFPGTYY 460
BLAST of mRNA_Ecto-sp13_S_contig1186.1593.1 vs. uniprot
Match: A0A7S3W2F9_EMIHU (Hydroxymethylglutaryl-CoA synthase (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3W2F9_EMIHU) HSP 1 Score: 414 bits (1063), Expect = 1.520e-128 Identity = 226/395 (57.22%), Postives = 279/395 (70.63%), Query Frame = 3
Query: 279 RPSNVGILAMDMYFPRSYVEQSDLEKTDGCEGKYTVGLGQNKLAFVDDREDINSVLMTVMQSLLEKYDIDAAKIGRLEVGTETLLDKSKSAKTWLMP-LLGESNTDVEGVTSYNACYGGSAALFNSVAWVESSEWDGRYALVVCGDIAVYEAGPARPTGGCGAVAMLVGPDAPLVLEPGLRSTHARDAYDFYKPK-HSEYAEVDGRLSQSVYLESVDKCYAGFRAKAAARQDRLVASGVTQSGGATTPPAAVTVDSFDFVSLHAPYNKLVQKGFARMSFLDFRSDPSAEGFRDLPAAAAEGWRTVELEGTYADREIDAAFRKASAGDFKARCLPASTVSREVGNCYTASVFAGLVSVVADKGSAMEDGGGARVFMFSYGSGFIATAYSFKARRPT 1457
R ++ GILAM+ YFP+ YV Q+ LE+ DGC GKYTVGLGQ LAF DDREDI SVL+T LLE+Y + A+ IGRLEVGTETLLDKSKS KT LM L G ++DVEGV+S NACYGG+AAL NSVAWVESS WDGRYALVVCGDIAVY GPARPTGG GAVAMLVGPDAPLV+ G R+THA + YDFYKP+ +EYA VDG+LSQ YL SVD C++ +AK L A + G PA + +FD+V +H+PYNKLVQKGFAR+ + DF D +A F A A+ W V T DRE + F + DF+A+C P+ T SR+VGNCYTA+++ L+S+V+ K S++ GAR+ +FSYGSG +ATA++ R P+
Sbjct: 12 RATDAGILAMECYFPQRYVPQTALEEADGCAGKYTVGLGQTALAFFDDREDIASVLLTACARLLERYGVPASAIGRLEVGTETLLDKSKSVKTTLMAQLFGAEHSDVEGVSSTNACYGGTAALLNSVAWVESSAWDGRYALVVCGDIAVYAPGPARPTGGGGAVAMLVGPDAPLVMA-GPRATHAFEVYDFYKPRGDTEYATVDGKLSQDAYLASVDTCWSRLKAK-------LGAPAAAEQLGLNGSPADLR--AFDYVCMHSPYNKLVQKGFARLLYGDFADDATAPRF----AGDAQRWAGVPPAKTVGDREAEKCFVGLAKPDFEAKCAPSDTASRQVGNCYTAALYMNLLSLVSAKASSLI---GARLLLFSYGSGAVATAFTLIGREPS 389
BLAST of mRNA_Ecto-sp13_S_contig1186.1593.1 vs. uniprot
Match: A0A8J2WE60_9STRA (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WE60_9STRA) HSP 1 Score: 403 bits (1035), Expect = 2.390e-127 Identity = 223/428 (52.10%), Postives = 276/428 (64.49%), Query Frame = 3
Query: 279 RPSNVGILAMDMYFPRSYVEQSDLEKTDGCEGKYTVGLGQNKLAFVDDREDINSVLMTVMQSLLEKYDIDAAKIGRLEVGTETLLDKSKSAKTWLMPLLGESNTDVEGVTSYNACYGGSAALFNSVAWVESSEWDGRYALVVCGDIAVYEAGPARPTGGCGAVAMLVGPDAPLVLEPGLRSTHARDAYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYAGFRAKAAARQDRLVASGVTQSGGATTPPAAVTVDSFDFVSLHAPYNKLVQKGFARMSFLDFRSDPSAEGFRDLPAAAAEGWRTVELEGTYADREIDAAFRKASAGDFKARCLPASTVSREVGNCYTASVFAGLVSVVADKGSAMEDGGGARVFMFSYGSGFIATAYSFKARRPTTCRGQFSLGGMQKAMGIKDRLAKRLGRTPEDFAQA 1562
RP NVGI+AM+ Y P++YV Q+ LEK DGC+GKYTVGLGQ ++AF D RED+ S+L+T LLE Y ID +GRLEVGTETL+DKSKS KT L+ L E N ++EGVTS NACYGG+AALFNSVAWVESS WDGRYA+VVCGDIAVYE GPARP+GGCGAVA+L+GPDA LVLEP R+THA D +DFYKPK EY VDG LSQ+ YL VD CY + P + + S D+ HAPYNKLV+K AR++ D P R+ A V E + D+ +DA+ RKASA D+ R P++ R +GNCYTASVF GLVS+VA D G R+ MFSYGSG +A+ Y K R G+ +L ++ + + RL+KR+ R+ DFA A
Sbjct: 9 RPENVGIVAMEWYSPQTYVAQTSLEKQDGCDGKYTVGLGQQQMAFADSREDVGSLLLTACARLLENYKIDPKSVGRLEVGTETLIDKSKSVKTSLLRLF-EGNPNMEGVTSVNACYGGTAALFNSVAWVESSAWDGRYAIVVCGDIAVYEKGPARPSGGCGAVALLIGPDASLVLEPQ-RTTHALDCWDFYKPKGGEYPLVDGALSQACYLRCVDACY-------------------------SNPGSYGNLASVDYCVFHAPYNKLVRKAHARLALRDSNDRP-----RNWCVAG-----DVAYEQSLVDKGLDASLRKASADDYDKRVAPSTEAPRHIGNCYTASVFFGLVSLVAS-----SDLEGKRILMFSYGSGAVASMYVLKGRS-----GKIALSSIRSTVDLSARLSKRVERSAADFAGA 389 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1186.1593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1186.1593.1 >prot_Ecto-sp13_S_contig1186.1593.1 ID=prot_Ecto-sp13_S_contig1186.1593.1|Name=mRNA_Ecto-sp13_S_contig1186.1593.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=486bp MDMYFPRSYVEQSDLEKTDGCEGKYTVGLGQNKLAFVDDREDINSVLMTVback to top mRNA from alignment at Ecto-sp13_S_contig1186:2840..13330- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1186.1593.1 ID=mRNA_Ecto-sp13_S_contig1186.1593.1|Name=mRNA_Ecto-sp13_S_contig1186.1593.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10491bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1186:2840..13330- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1186:2840..13330- >mRNA_Ecto-sp13_S_contig1186.1593.1 ID=mRNA_Ecto-sp13_S_contig1186.1593.1|Name=mRNA_Ecto-sp13_S_contig1186.1593.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1458bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1186:2840..13330- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |