prot_Ecto-sp13_S_contig55880.15901.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig55880.15901.1
Unique Nameprot_Ecto-sp13_S_contig55880.15901.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length77
Homology
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BLAST of mRNA_Ecto-sp13_S_contig55880.15901.1 vs. uniprot
Match: D7FJ23_ECTSI (HEAT repeat-containing protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ23_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 6.530e-24
Identity = 62/79 (78.48%), Postives = 68/79 (86.08%), Query Frame = 0 
Query:    1 ECCLPLLRYCLDWEQARNHPYNERLLKILLGVTLNLSVDDATVAAVAAA--ERKESSRDTKSPKKTTRGSKGKDKANAA 77
            ECCLPLLR CLD EQA+N+  NERLL ILLGVTLNL+V DATVAAVA A  ER+ESSR+TKSPKKTTRGSK  DKA+AA
Sbjct: 1333 ECCLPLLRCCLDSEQAQNNQNNERLLNILLGVTLNLAVGDATVAAVAVAVAEREESSRNTKSPKKTTRGSK--DKASAA 1409
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BLAST of mRNA_Ecto-sp13_S_contig55880.15901.1 vs. uniprot
Match: A0A6H5KF89_9PHAE (HEAT repeat-containing protein 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF89_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 4.510e-21
Identity = 59/79 (74.68%), Postives = 64/79 (81.01%), Query Frame = 0 
Query:    1 ECCLPLLRYCLDWEQARNHPYNERLLKILLGVTLNLSVDDATVAAVAAAERKESSRDTKSPKKTTRGSKGK--DKANAA 77
            ECCLPLLR  LD EQARNHP NE LLKILL VTLN SV DA V AVAA++R+ SSR+TKSP KT RGSKGK  DKA+AA
Sbjct: 1293 ECCLPLLRCLLDSEQARNHPNNEHLLKILLTVTLNPSVGDAAVVAVAASDREGSSRNTKSPNKT-RGSKGKSEDKASAA 1370
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig55880.15901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJ23_ECTSI6.530e-2478.48HEAT repeat-containing protein 1 n=1 Tax=Ectocarpu... [more]
A0A6H5KF89_9PHAE4.510e-2174.68HEAT repeat-containing protein 1 n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig55880contigEcto-sp13_S_contig55880:558..788 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig55880.15901.1mRNA_Ecto-sp13_S_contig55880.15901.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig55880 558..790 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig55880.15901.1 ID=prot_Ecto-sp13_S_contig55880.15901.1|Name=mRNA_Ecto-sp13_S_contig55880.15901.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=77bp
ECCLPLLRYCLDWEQARNHPYNERLLKILLGVTLNLSVDDATVAAVAAAE
RKESSRDTKSPKKTTRGSKGKDKANAA
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