mRNA_Ecto-sp13_S_contig10132.159.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10132.159.1
Unique NamemRNA_Ecto-sp13_S_contig10132.159.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10132.159.1 vs. uniprot
Match: D8LD39_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD39_ECTSI)

HSP 1 Score: 783 bits (2023), Expect = 1.170e-284
Identity = 399/411 (97.08%), Postives = 405/411 (98.54%), Query Frame = 1
Query:    1 QVRSEGVAVSHLQSGGFVGSMAFNRFIKKTTANPHADREGHYVYKDGGMFRKAWEAILAQLRKQGSVIGEVTQSIVGDQKSKRQEKSALERSTTTVTATSDVVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISVAEHFERLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRNELAKGELKPEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAGKGNNWGDRYDVGGTAVPDLIPYDSEEMADFVEEASTAEKERYRFLLLAALGGGVIQKAEKEKLELYREMHAIPDEEHNRLLFEQGWKPEEYDAGFHKDIASSHFQRYASLVKRELDKGKVTAKAKSNLRQFRTQGSISPQAH 1233
            +VRSEGVAVSHLQSGGFVGSMAFNRFIKKTTANPH+DREGHYVY DGGMFRKAW+AILAQLRKQGSV+GEVTQSIVGDQKSKRQEKSALERSTTTVTA+SDVVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRYREGHGIS+AEHFERLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLR ELAKGEL PEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAGKGNNWGDRYDVGGTAVPDLIPYDSEEMADFVEEAS AEKERYRFLLLAALGGGVIQKAEKEKLELYREMHAIPDEEHNRLLFEQGWKPEEYDAGFHKDIASSHFQRYASLVKRELDKGKVT KAKSNLRQFRTQGSIS QAH
Sbjct:   34 EVRSEGVAVSHLQSGGFVGSMAFNRFIKKTTANPHSDREGHYVYNDGGMFRKAWQAILAQLRKQGSVVGEVTQSIVGDQKSKRQEKSALERSTTTVTASSDVVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISMAEHFERLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRKELAKGELNPEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAGKGNNWGDRYDVGGTAVPDLIPYDSEEMADFVEEASIAEKERYRFLLLAALGGGVIQKAEKEKLELYREMHAIPDEEHNRLLFEQGWKPEEYDAGFHKDIASSHFQRYASLVKRELDKGKVTGKAKSNLRQFRTQGSISSQAH 444          
BLAST of mRNA_Ecto-sp13_S_contig10132.159.1 vs. uniprot
Match: A0A6H5JW21_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW21_9PHAE)

HSP 1 Score: 750 bits (1936), Expect = 1.940e-268
Identity = 400/483 (82.82%), Postives = 408/483 (84.47%), Query Frame = 1
Query:    1 QVRSEGVAVSHLQSGGFVGSMAFNRFIKKTTANPHADREGHYVYKDGGMFRKAWEAILAQLRKQGSVIGEVTQSIVGDQKSKRQEKSALERSTTTVTATSDVVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQR-----------------------YREGHGISVAEHFERLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRNELAKGE-------------------------------------------------LKPEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAGKGNNWGDRYDVGGTAVPDLIPYDSEEMADFVEEASTAEKERYRFLLLAALGGGVIQKAEKEKLELYREMHAIPDEEHNRLLFEQGWKPEEYDAGFHKDIASSHFQRYASLVKRELDKGKVTAKAKSNLRQFRTQGSISPQAH 1233
            +VRSEGVAVSHLQSGGFVGSMAFNRFIKKTT+NPHADREGHYVYKDGGMFRKAWEAILAQLRKQGSV+GEVTQSIVGDQKSKRQEKSALERSTTTVTATSD+VVYVWDQHALREFIKRRPMIGA LQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQR                       YREGHGIS+AEHF+RLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRNELAKGE                                                 L PEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAGKGNNWGDRYDVGGTAVPDLIPYDSEEMADFVEEAS AEKERYRFLLLAALGGGVIQKAEKEKLELYREMHAIPDEEHNRLLFEQGWKPEEYDAGFHKDIASSHFQRYASLVKRELDKGKVT+KAKSNLR+FRTQGSISPQAH
Sbjct:  106 EVRSEGVAVSHLQSGGFVGSMAFNRFIKKTTSNPHADREGHYVYKDGGMFRKAWEAILAQLRKQGSVVGEVTQSIVGDQKSKRQEKSALERSTTTVTATSDMVVYVWDQHALREFIKRRPMIGASLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRWVKGRKDGGKVSLLGGCTCDGRWYREGHGISMAEHFQRLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRNELAKGEYHFCAFFFCCVFVIASSCCNEPPRSPSYRQFASCLVLVSFSPNGFDDDQLNPEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAGKGNNWGDRYDVGGTAVPDLIPYDSEEMADFVEEASIAEKERYRFLLLAALGGGVIQKAEKEKLELYREMHAIPDEEHNRLLFEQGWKPEEYDAGFHKDIASSHFQRYASLVKRELDKGKVTSKAKSNLRKFRTQGSISPQAH 588          
BLAST of mRNA_Ecto-sp13_S_contig10132.159.1 vs. uniprot
Match: A0A6H5K3S2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S2_9PHAE)

HSP 1 Score: 517 bits (1332), Expect = 4.970e-181
Identity = 271/324 (83.64%), Postives = 279/324 (86.11%), Query Frame = 1
Query:  262 ALERSTTTVTATSDVVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISVAEHFERLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRNELAKGELKPEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAGKGNNWGDRYDVGGTAVPDLIPYDSEEMADFVEEASTAEKERYRFLLLAALGGGVIQKAEKEKLELYREMHAIPDEEHNRLLFEQGWKPEEYDAGFHKDIASSHFQRYASLVKRELDKGKVTAKAKSNLRQFRTQGSISPQAH 1233
            +LE    T+T    +VVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKV QSRDH EHYRQLLAETLDGGRVTSTERKNLQRYRE HGIS+AEHFERLKE NWTHKEFQAGFREGVAPKDL ENFLKYEALLRNELAKGE                              GWTAD+YEAGKGNNWGDRYDV GTAVPDLIPYDSEEMADFVEEAS AEKERYRFLLLAALGGGVIQKAEKEKLELYREMHAIPDEEHNRLLFEQGWKPEEYDAGFHKDIASSHFQRYASLVKRELDKGKVT+KAKSNLR+FRTQGSISP+AH
Sbjct:   10 SLEIFRRTLTVHHPMVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVDQSRDHNEHYRQLLAETLDGGRVTSTERKNLQRYREDHGISMAEHFERLKETNWTHKEFQAGFREGVAPKDLLENFLKYEALLRNELAKGE------------------------------GWTADKYEAGKGNNWGDRYDVDGTAVPDLIPYDSEEMADFVEEASIAEKERYRFLLLAALGGGVIQKAEKEKLELYREMHAIPDEEHNRLLFEQGWKPEEYDAGFHKDIASSHFQRYASLVKRELDKGKVTSKAKSNLRKFRTQGSISPRAH 303          
BLAST of mRNA_Ecto-sp13_S_contig10132.159.1 vs. uniprot
Match: D8LD36_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD36_ECTSI)

HSP 1 Score: 488 bits (1257), Expect = 1.440e-164
Identity = 267/427 (62.53%), Postives = 319/427 (74.71%), Query Frame = 1
Query:    1 QVRSEGVAVSHLQSGGFVGSMAFNRFIKKTTANPHADR---EGHYVYKDGGMFRKAWEAILAQLRKQGSVIGEVTQSIVGDQKSKRQEKSALERSTTTVTATSDVVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISVAEHFERLKENNWTHKEFQAGFREGVAPKDLS-ENFLKYEALLRNELAKGELKPEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAGKGNNWGDRYDVGGTAVPDLIPYDSEEMADF------------VEEASTAEKERYRFLLLAALGGGVIQKAEKEKLELYREMHAIPDEEHNRLLFEQGWKPEEYDAGFHKDIASSHFQRYASLVKRELDKGKVTAKAKSNLRQFRTQGSISPQAH 1233
            +V+SEGV V HL SGGFVGSMAFNRFIK  T +P + +   EG   Y++GG+F +AWE  L QLRKQGS++GEV Q+ VGD  S+RQ+KS +ERS+ T+TATSDVV YVWD H LREF+KRRPMIGA LQKAISVDL NKV QSRDHKEHYRQLLAE LDGGRVTSTER+NLQRYR GH ISVAEH ERLKE+ WT ++F+AGF+E  APKD+S ENFLKYEALL++EL  GE+KPEA+SNLRKFRSQ GIDAQEHL+A+EKQGWTADEYE G G                   Y  EE +D              E A + EKERYRFLL+ ALGGG+++  +K +L+ YRE+H I  +EH  LL E GW  EE++AGFHK++AS+ FQ+Y +LV+REL KG+V  KAKSNLR FRT  +I  Q H
Sbjct:  250 EVKSEGVVVCHLASGGFVGSMAFNRFIK--TPSPTSTKKAGEGGSSYREGGIFTQAWEVFLYQLRKQGSIVGEVGQTFVGDNTSRRQDKSGMERSSNTITATSDVVAYVWDMHVLREFVKRRPMIGASLQKAISVDLANKVNQSRDHKEHYRQLLAEALDGGRVTSTERRNLQRYRGGHRISVAEHRERLKEHGWTEEDFEAGFQELAAPKDMSKENFLKYEALLKSELDTGEVKPEARSNLRKFRSQAGIDAQEHLLAIEKQGWTADEYEIG-GRAXXXXXXXXXXXXXXXXNY-LEESSDNGNGNERTAQEFGFEPAGSTEKERYRFLLVEALGGGMVEPGKKRELKRYRELHTISAKEHKELLAEHGWNEEEFEAGFHKELASTFFQQYVALVQRELQKGEVKPKAKSNLRNFRTSLNIDAQDH 672          
BLAST of mRNA_Ecto-sp13_S_contig10132.159.1 vs. uniprot
Match: D8LD37_ECTSI (Cyclic nucleotide-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD37_ECTSI)

HSP 1 Score: 401 bits (1030), Expect = 5.230e-133
Identity = 204/269 (75.84%), Postives = 234/269 (86.99%), Query Frame = 1
Query:    1 QVRSEGVAVSHLQSGGFVGSMAFNRFIKKTTANPHADREGHYVYKDGGMFRKAWEAILAQLRKQGSVIGEVTQSIVGDQKSKRQEKSALERSTTTVTATSDVVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISVAEHFERLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRNELAKGELKPEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAG 807
            +V+SEGVAVSH++ GGF+GSMAF R  KK +    A  +GHYVYKDGGMFRKAWEA+L QLR+ GSV+GEV Q++VGD+  KRQ+   LERS +TVTATSDVVVYVWDQHALREFIKRRPMIGA LQKAI+VDLVNKV QSRDH EHYRQLLAETLDGGRVTSTERKNLQRYREGHGIS  EH +RL++N WT +EF+AGF+ GVA    ++NFL+YEALLR ELAKG++KP+A+SNLRKFRSQ GIDAQEHLIAVEKQGWTAD+YEAG
Sbjct:  261 EVKSEGVAVSHMEKGGFIGSMAFMRLSKKLSVAKLASDDGHYVYKDGGMFRKAWEAVLGQLRRDGSVVGEVAQAVVGDKTLKRQDTMGLERSMSTVTATSDVVVYVWDQHALREFIKRRPMIGAFLQKAITVDLVNKVDQSRDHHEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISFDEHLDRLRDNKWTEEEFEAGFQMGVA----TQNFLEYEALLRKELAKGKVKPDARSNLRKFRSQVGIDAQEHLIAVEKQGWTADDYEAG 525          
BLAST of mRNA_Ecto-sp13_S_contig10132.159.1 vs. uniprot
Match: A0A6H5K0X4_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0X4_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 1.970e-112
Identity = 173/230 (75.22%), Postives = 197/230 (85.65%), Query Frame = 1
Query:    1 QVRSEGVAVSHLQSGGFVGSMAFNRFIKKTTANPHADREGHYVYKDGGMFRKAWEAILAQLRKQGSVIGEVTQSIVGDQKSKRQEKSALERSTTTVTATSDVVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISVAEHFERLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRNELAKGEL 690
            +V+SEGVAVSH++ GGF+GSMAF R  KK +A   A  +GHYVYKDGGMFRKAWEAIL QLR+ GSV+GEV Q++VGD+  KRQ+   LERS +TVTATSDVVVYVWDQH LREFI RRPMIGACLQKAI+VDLVNKV QSRDH EHYRQLLAETLDGGRVTSTERKNLQRYREGHGIS  EH +RLKENNWT +EF+AGF+ GVA    ++NFL+YEALLR ELAKG++
Sbjct:   34 EVKSEGVAVSHMEKGGFIGSMAFMRLSKKLSAAKLAADDGHYVYKDGGMFRKAWEAILGQLRRDGSVVGEVAQTVVGDKTLKRQDTMGLERSMSTVTATSDVVVYVWDQHELREFINRRPMIGACLQKAITVDLVNKVDQSRDHHEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISFEEHLDRLKENNWTEEEFEAGFQTGVA----TQNFLEYEALLRKELAKGKV 259          
BLAST of mRNA_Ecto-sp13_S_contig10132.159.1 vs. uniprot
Match: D8LD27_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD27_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 3.950e-77
Identity = 151/300 (50.33%), Postives = 186/300 (62.00%), Query Frame = 1
Query:    4 VRSEGVAVSHLQSGGFVGSMAFNRFIKK-------TTANPHADR-------------------------EGHYVYKDGGMFRKAWEAILAQLRKQGSVIGEVTQSIVGDQKSKRQEKSALERSTTTVTATSDVVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISVAEHFERLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRNELAKGELKPEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAG 807
            VRSEG  V  L+ GGFVGSMAFN FI++       T A   AD                          +G Y Y   G+     + I   LR   SV+G V  S+V D     ++   +E +  TVTATSDVVVYVWDQHALR FIKRRP+IGA LQKAIS D  NKV QSR HK  YR LL ETL+GG +  TE++ LQRYRE HGI++ EH   L E  WT +EF+ GF+ GVAP+  S++F+KYEAL++ ELA+GE+KPE+K  L  FR   GIDAQEH++A+ KQGWT D+YE G
Sbjct:   73 VRSEGEDVCRLEPGGFVGSMAFNAFIQEAPVASSHTAARGTADAWPAGGGRSDGKDQADSVFIEGLVVGDGGYKYGGKGVLDLVKDVIFNMLRGD-SVVGNVALSLVPDVVDGPKDLGKMECTKNTVTATSDVVVYVWDQHALRAFIKRRPLIGAGLQKAISEDFSNKVNQSRGHKTKYRMLLEETLEGGEINQTEKRKLQRYRETHGIALEEHKFMLSERGWTEEEFEVGFQPGVAPRQGSQHFVKYEALVQRELAQGEVKPESKLYLLNFRKHAGIDAQEHILALGKQGWTVDDYEVG 371          
BLAST of mRNA_Ecto-sp13_S_contig10132.159.1 vs. uniprot
Match: D7FN16_ECTSI (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN16_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 1.480e-76
Identity = 146/294 (49.66%), Postives = 185/294 (62.93%), Query Frame = 1
Query:    1 QVRSEGVAVSHLQSGGFVGSMAFNRFIKKTTA----NPHADRE------------------GHYVYK--DGGMFRKAWEAILAQLRKQGSVIGEVTQSIVGDQKSKRQEKSALERSTTTVTATSDVVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISVAEHFERLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRNELAKGELKPEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAGK 810
            +V+SEG  VSHL+ GGF+GSMAF RF ++  A     P   R                   G  VY   DG   RK  +       +Q  +IG+V +S+V D    R  +  +ERS TTVTATSDVV Y WD H L  F+KRRP+IGA LQKA++ D +NKV QSR H+E YR LL E+LD G +    R+ L+RYRE H IS   H   LKE  WT +E+  GF++  AP+D S  FL+YEAL+  EL+ GE+ PEA+SNLRKFRSQ  IDAQEHL+A++KQGWTAD+YEAG+
Sbjct:  243 EVKSEGETVSHLEPGGFIGSMAFQRFTQEAEAPVDVTPEVVRRNTINSSDFVYIDSIILENGSSVYGGGDGRSTRKIVKEAFLHFMRQDHIIGKVARSLVSDVMGMRVHEDDMERSKTTVTATSDVVTYAWDMHELHAFLKRRPLIGASLQKAMAEDFINKVYQSRGHEERYRLLLVESLDPGSINPIGREKLRRYRETHHISEEVHKGFLKEQGWTEEEYYMGFQQNKAPRDGSARFLEYEALVSRELSGGEVTPEARSNLRKFRSQAHIDAQEHLLAIQKQGWTADDYEAGE 536          
BLAST of mRNA_Ecto-sp13_S_contig10132.159.1 vs. uniprot
Match: A0A6H5KTM1_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTM1_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 8.470e-76
Identity = 152/300 (50.67%), Postives = 187/300 (62.33%), Query Frame = 1
Query:    4 VRSEGVAVSHLQSGGFVGSMAFNRFIKK-------TTANPHAD-------------------------REGHYVYKDGGMFRKAWEAILAQLRKQGSVIGEVTQSIVGDQKSKRQEKSALERSTTTVTATSDVVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISVAEHFERLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRNELAKGELKPEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAG 807
            VRSEG  V  L+ GGFVGSMAFN FI++       T A   AD                         R+G Y Y   G+       I   LR   SV+G V  S+V D   + ++   +E +  TVTATSDVVVYVWDQHALR F+KRRP+IGA LQKAIS D  NKV QSR HK  YR LL ETL+GG++  TE++ LQRYRE HGI++ EH   L E  WT +EF  GF+ GVAP+  S++F+KYEAL++ ELAKGE+KPE+K  L  FR   GIDAQEH++A+ KQGWT D+YE G
Sbjct:  268 VRSEGEDVCRLEPGGFVGSMAFNAFIQESPLASYHTVARGAADALPAGGGAGDGKDQADSVFIEGLVVRDGGYKYGGKGVLDLVKGVIFHMLRGD-SVVGNVALSLVPDVVDRSKDLGEMECAKNTVTATSDVVVYVWDQHALRAFLKRRPLIGAGLQKAISEDFSNKVNQSRGHKTKYRMLLEETLEGGKINQTEKRKLQRYRETHGIALEEHNFILAERGWTEEEFDVGFQPGVAPRQGSQHFVKYEALVQRELAKGEVKPESKLFLLNFRRHAGIDAQEHILALGKQGWTVDDYEVG 566          
BLAST of mRNA_Ecto-sp13_S_contig10132.159.1 vs. uniprot
Match: D8LD28_ECTSI (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD28_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 9.830e-76
Identity = 152/320 (47.50%), Postives = 194/320 (60.62%), Query Frame = 1
Query:    1 QVRSEGVAVSHLQSGGFVGSMAFNRFIKK----TTANPHADRE----------------------------------------------GHYVYKDGGMFRKAWEAILAQLRKQGSVIGEVTQSIVGDQKSKRQEKSA-LERSTTTVTATSDVVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISVAEHFERLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRNELAKGELKPEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAG 807
            +V +E  AV HL+   FVGSMAFNRF++     TT +P    +                                                 V   GG+F++A E  L  LR+  S++G + QS V D +  R+     +ERS TTVTAT+DVV YVWD H LR FIKRRP+ GA LQ AIS DL  KV QSR  +E YR LLAE LDGG +T  E+K L RYR+ HGIS  EH E LKE+ WT +EF+AGF++GV P+D S++FL YEALLR ELAKG+++ + + +LR+FR++ GIDAQEHLIA+EKQGWTAD+YE G
Sbjct:  181 EVEAESAAVGHLEQKQFVGSMAFNRFMQASASPTTTSPTVPTDISSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNVPGGGGVFKEAKEVALNVLRRD-SIVGSMAQSFVADAEGDRRHGGGQMERSATTVTATTDVVAYVWDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSRGPEERYRLLLAEALDGGVITPIEKKKLTRYRDMHGISSEEHRELLKEHEWTKEEFEAGFQKGVTPRDGSKHFLNYEALLRRELAKGKVEDDGRQSLREFRTRAGIDAQEHLIALEKQGWTADDYEVG 499          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10132.159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LD39_ECTSI1.170e-28497.08Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5JW21_9PHAE1.940e-26882.82Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5K3S2_9PHAE4.970e-18183.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD36_ECTSI1.440e-16462.53Cyclic nucleotide-binding domain-containing protei... [more]
D8LD37_ECTSI5.230e-13375.84Cyclic nucleotide-binding protein n=1 Tax=Ectocarp... [more]
A0A6H5K0X4_9PHAE1.970e-11275.22Cyclic nucleotide-binding domain-containing protei... [more]
D8LD27_ECTSI3.950e-7750.33Cyclic nucleotide-binding domain-containing protei... [more]
D7FN16_ECTSI1.480e-7649.66Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5KTM1_9PHAE8.470e-7650.67Cyclic nucleotide-binding domain-containing protei... [more]
D8LD28_ECTSI9.830e-7647.50Cyclic nucleotide-binding domain-containing protei... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10132contigEcto-sp13_S_contig10132:3..5514 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score500.7
Seed ortholog evalue6.3e-139
Seed eggNOG ortholog2880.D8LD36
Model size1233
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Cyclic nucleotide-monophosphate binding domain
EggNOG OGs2DQI1@1,2SD0D@2759
Cds size1233
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10132.159.1prot_Ecto-sp13_S_contig10132.159.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10132 3..5514 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462509.7358544-CDS-Ecto-sp13_S_contig10132:2..711681462509.7358544-CDS-Ecto-sp13_S_contig10132:2..71Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10132 3..71 -
1681462509.7473958-CDS-Ecto-sp13_S_contig10132:606..9931681462509.7473958-CDS-Ecto-sp13_S_contig10132:606..993Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10132 607..993 -
1681462509.7590396-CDS-Ecto-sp13_S_contig10132:2264..23541681462509.7590396-CDS-Ecto-sp13_S_contig10132:2264..2354Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10132 2265..2354 -
1681462509.7754388-CDS-Ecto-sp13_S_contig10132:3255..34301681462509.7754388-CDS-Ecto-sp13_S_contig10132:3255..3430Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10132 3256..3430 -
1681462509.786248-CDS-Ecto-sp13_S_contig10132:4644..48531681462509.786248-CDS-Ecto-sp13_S_contig10132:4644..4853Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10132 4645..4853 -
1681462509.7964349-CDS-Ecto-sp13_S_contig10132:5211..55141681462509.7964349-CDS-Ecto-sp13_S_contig10132:5211..5514Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10132 5212..5514 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10132.159.1

>prot_Ecto-sp13_S_contig10132.159.1 ID=prot_Ecto-sp13_S_contig10132.159.1|Name=mRNA_Ecto-sp13_S_contig10132.159.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=411bp
QVRSEGVAVSHLQSGGFVGSMAFNRFIKKTTANPHADREGHYVYKDGGMF
RKAWEAILAQLRKQGSVIGEVTQSIVGDQKSKRQEKSALERSTTTVTATS
DVVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVVQSRDHKEHYRQ
LLAETLDGGRVTSTERKNLQRYREGHGISVAEHFERLKENNWTHKEFQAG
FREGVAPKDLSENFLKYEALLRNELAKGELKPEAKSNLRKFRSQKGIDAQ
EHLIAVEKQGWTADEYEAGKGNNWGDRYDVGGTAVPDLIPYDSEEMADFV
EEASTAEKERYRFLLLAALGGGVIQKAEKEKLELYREMHAIPDEEHNRLL
FEQGWKPEEYDAGFHKDIASSHFQRYASLVKRELDKGKVTAKAKSNLRQF
RTQGSISPQAH
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mRNA from alignment at Ecto-sp13_S_contig10132:3..5514-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10132.159.1 ID=mRNA_Ecto-sp13_S_contig10132.159.1|Name=mRNA_Ecto-sp13_S_contig10132.159.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5512bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10132:3..5514- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTAAGGTCGGAAGGCGTAGCGGTGTCCCACTTGCAGTCGGGGGGATT CGTTGGGTCGATGGCCTTCAACCGCTTCATCAAGAAGACGACCGCCAACC CTCACGCGGACCGCGAGGGCCACTATGTCTACAAGGACGGAGGCATGTTC CGGAAGGCGTGGGAGGCCATCCTGGCGCAGCTGCGGAAGCAGGGCTCCGT TATCGGCGAGGTGACGCAGTCGATCGTGGGAGACCAGAAGAGCAAGCGGC AGGAGAAGTCGGCGCTGGAACGGTCCACCACTACCGTAACCGCTACTTCC GACGTGAGTATTTCACACGAGATAACCCCCCCACACCTCCTGAATGTGTC TCGTCTGGCCGTGGGTGGTATTCTGTGGGAGTTGGTGTGGTAACTTTCGT CACGGTATTTCTTGGCCTGATACTTTTGGGGGGGGGCTTATGACGAGCCG CAAAATGATCGCGACCTTTAGTGTGGTGTTTTAGAAGGGGTACTATCGTG ATGGAGGATGGTGTTATCTTGCGTGGAGACGGTACCGCTCTACCCTGCTG GTGCCGCCACATGGCCTGGTCTTGCCCTCACGCCCGTCGATGTACGATGA TATGTACCGTTACGGTTCCCTCCCTTGAAATGTTTTGGCGCACTCTCGTG TGGGTCCTCAGGTAGTGGTGTACGTCTGGGACCAGCACGCTCTGCGAGAG TTCATCAAGCGTCGGCCCATGATCGGTGCGTGTCTGCAGAAGGCGATATC GGTTGACCTGGTGAACAAGGTCGTGCAGTCTCGGGATCACAAGGAGCACT ACCGGCAGCTGCTCGCCGAGACGTTGGACGGAGGACGGGTCACCTCCACC GAGAGGAAGAACTTGCAGAGGTGGGTGAAGGGACGAAAGGACGGAGGGAT AGTTTCGCTTCTCGGTTCTTGTACCTGCGATAGGCGGTGGTGGTGAAGCA ACGAGGAAGCTGTTGCGATACTTCAAGAATGCTGTTGGGGAACGAAAAGG GCAGCGCAGGGCTTTGGCAGCAAGACTCGGAGGTTCTCGGATACCATTGT GTATACGGGGAGTACCAATCATGGCATTCACAATACAAAGGTGAAGGACG AAGACCGTTGATTCGATGTACCCATGTGGGAAGTTGTTGTTCGCCATGAT GCAATGGGAGGCGTTACAGAAAGAGAGAGCTTTGTCGTCGTTGACGCGTT AATTTTTTCTCTTGACGCCCCGTGGAGCGGGCTCGTCATTTCCTTCCATG TATTGCGTCCCCACAACCGAAATGTTCAGAAATCAAAAGCACACGTCACC TACACTCAATGTCACATTTTTTGTTCTTTTTCAGAGTTTCGTCCCCAAAA CTGAAAACTAAAAAAACAAGGAAACAGAACGAAACACACCAACCCTCAGT ATGACATGATAATAGTTTTTTTTGTTGCGATGGTGTGTTTCAACGGTGAA GTATTTTTATTTTTGGACGTTCGTCGCGGCGAATTTTTTCGTATGTTGAC ACCACCGTGCACAACTGAGCCGACCGCGCTGTTGCCAGGGCCTCACTCAC AAAGTGCGTTTCGCGAGTTGGCGAGAGCCTCGACGCTACTTCTGTGCCCC TTGCCAACGACAGCCCATCCGGAGTTCGGCCCTCTCTAGTCCATGCCTCG TCTGTTTATTTGTTCTGTCTTTGGTTTTGGTTGGTGTCGGAGTTACGGTC GGCCACCGCTTGGGGTTCTCGTTTTTCTTCGACAGCAGTTGATGGACAAA CTCTTGGTTGTTTCGATTGGCGGCCTAGAGCTCCAAGCGTGAAAGAACGG TCAGGGTTGTGGCCGGGCTATCTGTCGATGGTTTTCTATGATTTTCTCTT CTGTCCAGGTCGTTGTTGGTGTCGAGCTTGTGCAACGATAAAGCGTCCGG CCGTGGGAAAAGAGGCTCCATTTTGAGATGCGATGTCACTGCTCCTCGTC TCTCTCCCTCTCTCTCCCTCTCTCTCCCTCTCTTGTTCTCCTCTCTCTCC ATCTACTCTGTACTTGCCTTCTCGCTCTCTCCCTCTCCCTCCCTCTTGGT ACTCCTGCATGCGATGACCACCGCGCTTTCCCAGGTACCGCGAGGGTCAC GGCATCTCGGTGGCGGAGCACTTTGAGAGGCTCAAGGAAAACAACTGGAC TCACAAGGAGTTCCAAGCAGGATTTAGAGAAGGCGTCGCCCCCAAGGACC TGTCGGAGAACTTCCTCAAGTACGAGGCGTTGCTGCGGAACGAGCTGGCA AAGGGAGAGGTGTGTATGTGCACGACAAAATGACTTACCCGAAAATAAGA CATGATGCACGGGTTACGGATTGGTTTGGGGTTGGCGCTTCCGGTCCTAA CTGGCAAAGGATATAGTGCTACTTGGAGGTATAATTTTGAGCGGATCACA AGAATGTGGCCAGATGGATTAACGCTCAAGACGAAGCTCCGGGCAAGTGT TTGGTGTTATGTTTCCCCTCTCGGTCGGAGTTGTCACGGGGAGAGGTGCA TGCATGTAATGTAAATATACAAGGTGAAGCTCGGCTAGGGTCTGGTCTTG TATTTGTTGGCCAGGCTGATGGGGTCAATATGTACCGACTGGCGCCAGAA TAGACTGGACGAAACACACACGAACCTACGCCGTCGATGCTACAAAACAG CAGTATCTACGACACCACGCACACGCATACCTTCCCTCGTCGCTCACTCG TGATACCCCATGGGTCATTCCATTCTGCGGGGCCTCCGCTCTAGACTCGT CGCTGAGGACGTTTCTCGGTTCGTGATGCCGACGACGATCGGTGAATCGT CTGACTGATTTAATTCTTTTGCACGGGTGTCGGTGTTCCGCCAGACTGGC GAGGACTCTGGCCGTCCATTTTTCAGTCTTCTATCTTGTTTTGGCCCTGA TTCGTTTGTCCTGAATGATTTTTGATGATGAGCTCATGAGGTGCGGTGGT CAGTCTCGAAATATTTCTCACCGAACGTTTTCGCCTCCTGTTGTTGCGAT GGACCTTCTCGAAGTATCGTTTCAGAGCGTTCTTTTCTCTTCTTGTTTCT TGATTGCTTCTTCTTGTTGCAATGAACCGTCTCGAAGCAACTCTCACCGC CCTTTCGCTTCTTGTTTGGTCCTGGTTTGCTTTTCTGCGAATGGGTTTGA TGATGATCAGCTCAAACCCGAGGCGAAGTCGAACCTGAGAAAGTTCCGAT CGCAGAAGGGTATCGATGCCCAAGAGCACCTCATCGCCGTCGAAAAGCAG GTATGATCGAGTTTCCAACCACAAGCAATTATCACAAGGTTTTGTCGATG ATGTGATCGTTATACTTCACGATGAGGTTGGAAATATATGAGGTTGATCG AGAAGTTTGAGAAAATATGGGTATGGTACTTACTTACAGGGCTCCCGGGG GCGACGCAAGAGGACATGGCCGATGTCATCGCGGTCGCATCGTTGTTGCA TCTCAACGTCGTGACGTGCCGGTTTTGCGCAGGGACAACCTGCATCATGC GCGGGGTTTCTTGTGTTTGGCCGTTACTTTCTCGTGTGTGTGAGTGTGCT TTTTTGGGTAGTGGCGTCGCTTAAATCTCTGCGTTTCATCAGTCTTCTGT AGTGGTGTTACTGTTGCTCATGGTCTGTGGGACTTGTGTGCGTTACGCAC GAATCACACGTTTTCCTGTTAAAGTAAGATTTTTTTGTGTTTCTTGCGAA GGCTTTCTTGGCGCAGAACACGTCCACGGGGTCCACAGCCAGTTTTGTCA ACTTTGGGCGTTGAGAACACGCGCCGCGGGTGGCTGGCTGTCCTCAGGAG TGCGCGGTAATGTACCGACGAGTCCCCTGCGGCTCCTGAGAAGGAAGCGT TCGAAAATACTCGCTTCCCCGAGCTAACGACGATGTCTACCACTTTTGCT GAGAATGTTCGTGGTTTCTGAGATTTCAGCACTGAATGTGTTTCCAGTGT ACCTCCCTTCAAGCTTCAACTACCCACACCTGCTGTATGAGCGTGGACAC AACTTCATTTTCAGTAAGAAGTCCAACAAGAATACCTTCATGTTGTTCAA CCGTGTCATGGACGAATGGATGTCAGCGAACCTCTGGCTGGAGAGTCCAG TCCTGTTGGATACAAACCACACGAGCGGGAGAGAAGAAGGCACTGTAGAC GAGAAATTATCATCGTGCACGATGGTTTCTCGTGTCCCGCCCGTGTGCTT TGTATTCAGCAAAAGTGGACGCTTCAACCGTCGCTGGCATGGAATCGTTA ATCGCACATGATGCGGTTGAACAACTTTTGCAGGGGAGGCGTATGCCACA TTCCCGTTTTCCAGCCTAGTTTACAACAGCTGCAACCCCACTTAGCTACC CCCTCCCATTGCCATTGTTACTCTCAAGCGAACGCCCCTTTAGGCGGTAG GAAACCCTTAACAACCGTTCTCTCGTCGGCAAGCACGCCGTGTGATTAAT CAATCTTCCCTTTCGCACCCCCGCCGTTCCTCGATGATTCCACGGTGCCC CCCCCCTCCCCCGCCTTGAAGGGTTGGACGGCGGACGAGTACGAGGCCGG GAAGGGCAACAACTGGGGCGACCGTTACGACGTGGGCGGCACCGCCGTGC CTGACCTTATCCCGTACGACTCGGAAGAGATGGCGGACTTTGTGGAGGAG GCCAGCACCGCCGAGAAAGAGCGGTATCGCTTCCTCCTCCTGGCCGCCCT CGGGGGAGGGGTGATCCAGAAGGCGGAGAAGGAGAAGCTGGAGCTATACC GCGAGATGCACGCCATCCCGGACGAGGAGCACAACCGGCTGCTATTCGAG CAGGGCTGGAAGCCGGAGGAGTACGACGCGGGCTTCCACAAGGACATCGC GTCCTCGCACTTCCAGCGGTACGCCTCGCTCGTCAAGCGCGAGCTTGACA AGGGGAAGGTGAGCAGCGAGGGGAGGGGGGGCTCCGCGGGGGATATCATG CTTGGCTTTGGTTGGGGGAAGGGTTAGGGTTAGGGACAGGGGTACGAACC CCCCCTCTCTAGTTCATGGAATCCTCGCGAAGACGGTCCTTCCCAGCGGT ACAGTATAATACTAGGTTTTGGTGTTGGCTCGAGAAGGACGTCGCTACAC ACTCACCAACCCACATGTGATCCAGCCGGATGCTAATGAGCTCTGAGCCT ATCTTTTATTCGATGAAATTAGACCATCTGATAAGTCAGCGCTGACTGGT CAGGTGGTCTAATCTTATCGAATATGTCACGCCTGTTTTTTTGTATCACC TTGATTTGTTTCGTCGAGTGAAGTTGTCGGAAATCTATCTTCACACACAC ACACACCCTCGTTTCTTTTGCTGTACGTTTCTTGTCGTGCCTGTTTAAAA CTGTGGGTTGAAAATCACACAACATGACAGAAGTACGCGTTCGAGAAAAT ACGTCTGATTTTCGCTGCCGGTGGGTGTGTTGTGATCGGTCAGGTTACTG CCAAGGCAAAGTCTAACCTCAGGCAATTCCGGACCCAGGGCAGCATCTCC CCCCAGGCTCAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10132:3..5514-

>mRNA_Ecto-sp13_S_contig10132.159.1 ID=mRNA_Ecto-sp13_S_contig10132.159.1|Name=mRNA_Ecto-sp13_S_contig10132.159.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1233bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10132:3..5514- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTAAGGTCGGAAGGCGTAGCGGTGTCCCACTTGCAGTCGGGGGGATT
CGTTGGGTCGATGGCCTTCAACCGCTTCATCAAGAAGACGACCGCCAACC
CTCACGCGGACCGCGAGGGCCACTATGTCTACAAGGACGGAGGCATGTTC
CGGAAGGCGTGGGAGGCCATCCTGGCGCAGCTGCGGAAGCAGGGCTCCGT
TATCGGCGAGGTGACGCAGTCGATCGTGGGAGACCAGAAGAGCAAGCGGC
AGGAGAAGTCGGCGCTGGAACGGTCCACCACTACCGTAACCGCTACTTCC
GACGTAGTGGTGTACGTCTGGGACCAGCACGCTCTGCGAGAGTTCATCAA
GCGTCGGCCCATGATCGGTGCGTGTCTGCAGAAGGCGATATCGGTTGACC
TGGTGAACAAGGTCGTGCAGTCTCGGGATCACAAGGAGCACTACCGGCAG
CTGCTCGCCGAGACGTTGGACGGAGGACGGGTCACCTCCACCGAGAGGAA
GAACTTGCAGAGGTACCGCGAGGGTCACGGCATCTCGGTGGCGGAGCACT
TTGAGAGGCTCAAGGAAAACAACTGGACTCACAAGGAGTTCCAAGCAGGA
TTTAGAGAAGGCGTCGCCCCCAAGGACCTGTCGGAGAACTTCCTCAAGTA
CGAGGCGTTGCTGCGGAACGAGCTGGCAAAGGGAGAGCTCAAACCCGAGG
CGAAGTCGAACCTGAGAAAGTTCCGATCGCAGAAGGGTATCGATGCCCAA
GAGCACCTCATCGCCGTCGAAAAGCAGGGTTGGACGGCGGACGAGTACGA
GGCCGGGAAGGGCAACAACTGGGGCGACCGTTACGACGTGGGCGGCACCG
CCGTGCCTGACCTTATCCCGTACGACTCGGAAGAGATGGCGGACTTTGTG
GAGGAGGCCAGCACCGCCGAGAAAGAGCGGTATCGCTTCCTCCTCCTGGC
CGCCCTCGGGGGAGGGGTGATCCAGAAGGCGGAGAAGGAGAAGCTGGAGC
TATACCGCGAGATGCACGCCATCCCGGACGAGGAGCACAACCGGCTGCTA
TTCGAGCAGGGCTGGAAGCCGGAGGAGTACGACGCGGGCTTCCACAAGGA
CATCGCGTCCTCGCACTTCCAGCGGTACGCCTCGCTCGTCAAGCGCGAGC
TTGACAAGGGGAAGGTTACTGCCAAGGCAAAGTCTAACCTCAGGCAATTC
CGGACCCAGGGCAGCATCTCCCCCCAGGCTCAC
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