mRNA_Ecto-sp13_S_contig1176.1511.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1176.1511.1 vs. uniprot
Match: D7FPP0_ECTSI (Cryptochrome 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP0_ECTSI) HSP 1 Score: 1022 bits (2642), Expect = 0.000e+0 Identity = 515/562 (91.64%), Postives = 524/562 (93.24%), Query Frame = 2
Query: 260 MSSSKAPSSIHWFRKGLRLHDNRALLEACNGTGSLYPLFVLDSDPASPESRAGPLRTTFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPQLFEEWNVKKLTFEADSEPRSRARDKEVGSLAKEAGVQVLIRGTSTLRNLQNYHMLMGKKQGTYLKSYGAFIKLHDNAGPVPDCAPDISEDLPAPGASPDDAEYDRFSIPSLTDLGVEPPEKALKFRGGEREALARLERVMAREDWISKFEKPKTSPNSIEPSTTVLSMYISHGCLSTRRFWHALCKVYTKKGGSKPPVSLKGQLLWKEFNYFSGYSIPNFDKMVGNPVARQIPWDKDEEKLMAWKEARTGFPWIDAAMTQLKEEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQASLFALFMPITCTLACFDGGYFRCYSPIAFGKKTDKNGDYIKKYLPVLRKFPSKYIYEPWTAPLQVQRGCGCIIGKDYPKPIVDHTDTSKANMAKMHDAYDAHQEAQAAESHDDAGSGXXXXXXXXX----ARSNARGSAPASRKRVKR 1933
MSSSK PSSIHWFRKGLRLHDNRALLEACNGT SLYPLFVLDSDPASPESRAGPLRT FLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPQLFEEWNVKKLTFEADSEPRSRARD+EVGSLAKEAGVQVLIRGTSTLRNLQNYHMLMGKKQGTYLK+YGAF+KLHDNAGPVPDCAPDIS DLPAPGASPDDAEYDRFSIPSL+DLGVEP KALKFRGGEREALARLERVMAREDWISKFEKPKTSPNSIEPSTTVLSMYISHGCLSTRRFWHALCKVYTKKGGSKPPVSLKGQLLWKEFNYFSGYSIP+FDKMVGNPV RQIPWDKDEEKLMAWKEARTGFPWIDAAMTQLK+EGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQ YFRCYSPIAFGKKTD+NGDYIKKYLP LRKFPSKYIYEPWTAPLQVQRGCGCIIGKDYPKPIVDH DTSKANMAKM+DAYDAHQEAQAAESHDD GS XXXXXXXXX ARS ARG+ PAS KRVKR
Sbjct: 1 MSSSKEPSSIHWFRKGLRLHDNRALLEACNGTASLYPLFVLDSDPASPESRAGPLRTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPQLFEEWNVKKLTFEADSEPRSRARDREVGSLAKEAGVQVLIRGTSTLRNLQNYHMLMGKKQGTYLKTYGAFLKLHDNAGPVPDCAPDISGDLPAPGASPDDAEYDRFSIPSLSDLGVEPLAKALKFRGGEREALARLERVMAREDWISKFEKPKTSPNSIEPSTTVLSMYISHGCLSTRRFWHALCKVYTKKGGSKPPVSLKGQLLWKEFNYFSGYSIPSFDKMVGNPVIRQIPWDKDEEKLMAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQ--------------------YFRCYSPIAFGKKTDQNGDYIKKYLPALRKFPSKYIYEPWTAPLQVQRGCGCIIGKDYPKPIVDHADTSKANMAKMNDAYDAHQEAQAAESHDDGGSXXXXXXXXXXXXXXARSRARGAQPASSKRVKR 542
BLAST of mRNA_Ecto-sp13_S_contig1176.1511.1 vs. uniprot
Match: A0A835Z8B1_9STRA (DNA photolyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B1_9STRA) HSP 1 Score: 570 bits (1468), Expect = 2.270e-194 Identity = 288/521 (55.28%), Postives = 356/521 (68.33%), Query Frame = 2
Query: 287 IHWFRKGLRLHDNRALLEACNGTGSLYPLFVLDSDPASPESRAGPLRTTFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPQLFEEWNVKKLTFEADSEPRSRARDKEVGSLAKEAGVQVLIRGTSTLRNLQNYHMLMGKKQGTYLKSYGAFIKLHDNAGPVPDCAPDISEDL-PAPGASPDDAEYDRFSIPSLTDLGVEPPEKALKFRGGEREALARLERVMAREDWISKFEKPKTSPNSIEPSTTVLSMYISHGCLSTRRFWHALCKVY-TKKGGSKPPVSLKGQLLWKEFNYFSGYSIPNFDKMVGNPVARQIPWDKDEEKLMAWKEARTGFPWIDAAMTQLKEEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQASLFALFMPITCTLACFDGGYFRCYSPIAFGKKTDKNGDYIKKYLPVLRKFPSKYIYEPWTAPLQVQRGCGCIIGKDYPKPIVDHTDTSKANMAKMHDAYDAHQEAQAAESHDDA 1843
IHWFRKGLRLHDN ALL+A +YP+F+LD A+P ++ G LR FLLE+L DLD QL+ GSRL+VV+G P E P+LF EW+V LTFE D+EP ++ RD+EV +A+ GV V + TL NL Y G KSYG F+KL D+ G VP C ++ D+ P G++ E+ ++PSL P L + GGE ALAR++ +AR+ WI+KFEKPKTSPNS+EPSTTVLS Y+ GCLS+R F+H L ++Y G +KPPVSL GQLLW+EF Y G+++P+FD+M GNP+ RQ+PWD + + L AW+E+RTG+P+IDA MTQL+ EGWIHHLARHAVACFLTRGDLWQSWE GA VFD+ LLDADWS+N NW WLSCS+FFYQ YFRCYSP+AFGKKTD G YI+KYLP L+ +P KYIYEPW AP VQ GC++G DYPKPIVDH SK NM +M AY AQAA S DDA
Sbjct: 5 IHWFRKGLRLHDNPALLQAAKEAQQVYPVFMLDPHFANP-AKVGQLRYAFLLETLSDLDTQLKGIGSRLYVVQGNPAERFPELFREWSVSLLTFETDTEPYAKKRDQEVCKIAETCGVTVAQHASHTLHNLDRYEAKAGASP--LPKSYGPFLKLFDSLGAVPQCVETVTVDIMPQDGSAVPAGEH---TVPSLDTTPYPPLANPLLYPGGETAALARMQLHLARKQWIAKFEKPKTSPNSLEPSTTVLSPYLKFGCLSSRLFYHKLAEIYKASPGHAKPPVSLHGQLLWREFFYMCGHTVPHFDRMEGNPICRQVPWDSNAQLLAAWEESRTGYPFIDAIMTQLRTEGWIHHLARHAVACFLTRGDLWQSWEAGAVVFDKYLLDADWSVNTANWMWLSCSSFFYQ--------------------YFRCYSPVAFGKKTDPTGAYIRKYLPQLKNYPDKYIYEPWLAPKAVQEKAGCVVGCDYPKPIVDHKQVSKDNMDRMKAAY----AAQAAGSDDDA 495
BLAST of mRNA_Ecto-sp13_S_contig1176.1511.1 vs. uniprot
Match: A0A3B1IHH9_ASTMX (Cryptochrome-1-like n=6 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1IHH9_ASTMX) HSP 1 Score: 541 bits (1395), Expect = 2.000e-183 Identity = 277/509 (54.42%), Postives = 347/509 (68.17%), Query Frame = 2
Query: 281 SSIHWFRKGLRLHDNRALLEACNGTGSLYPLFVLDSDPASPES-RAGPLRTTFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPQLFEEWNVKKLTFEADSEPRSRARDKEVGSLAKEAGVQVLIRGTSTLRNLQNY-HMLMGKKQGTYLKSYGAFIKLHDNAGPVPDCAPDISEDLPAPGASPDDAEYDRFSIPSLTDLGVEPPEKA-LKFRGGEREALARLERVMAREDWISKFEKPKTSPNSIEPSTTVLSMYISHGCLSTRRFWHALCKVYTKKGGSKPPVSLKGQLLWKEFNYFSGYSIPNFDKMVGNPVARQIPWDKDEEKLMAWKEARTGFPWIDAAMTQLKEEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQASLFALFMPITCTLACFDGGYFRCYSPIAFGKKTDKNGDYIKKYLPVLRKFPSKYIYEPWTAPLQVQRGCGCIIGKDYPKPIVDHTDTSKANMAKMHDAY 1798
S IHWFRKGLR+HDN AL A + +YP+F+LD P P++ + G R FL+E+L+DLD LR SRLFV+RG P EV P+LFEEW V +LTFE DSEP S+ RDKEV LAK+ GV+++ + + TL NL+ GK TY++ K+ PVP AP ED+ + + + + +P+L +LG + + + GGE+EAL RL+ M R +W+ FEKP+TSPN+++PSTTVLS Y+ GCLS R FW L +VY K S PPVSL GQLLW+EF Y + Y IPNF+KM GN + Q+ WD + E L AW+EARTGFP+IDA MTQL++EGWIHHLARHAVACFLTRGDLW SWE+G VF+ELLLDADW++N NWQWLS SAFF+Q YFR YSPIAFGKKTDKNGDYIKKYLP+L+KFP++YIYEPW AP +Q GCI+GKDYP+PIVDH SK N+ +M AY
Sbjct: 4 SCIHWFRKGLRVHDNPALKYALHDCKHMYPVFILD--PWFPKNAQVGINRWRFLIEALKDLDSSLRKLNSRLFVIRGVPREVFPRLFEEWKVTRLTFEVDSEPYSQKRDKEVMDLAKQHGVEIITKISHTLYNLERVIEENNGKAPLTYVRFQTVLNKIGPPKRPVP--AP-TREDMKGVSTPSSETDKENYGVPTLDELGQDSTTLGPVLYPGGEQEALRRLDEYMQRTNWVCSFEKPQTSPNALKPSTTVLSPYVKFGCLSARTFWWRLAEVYHGKKHSAPPVSLHGQLLWREFFYTAAYGIPNFNKMEGNTICVQVDWDSNPEHLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDADWALNAGNWQWLSASAFFHQ--------------------YFRVYSPIAFGKKTDKNGDYIKKYLPILKKFPAQYIYEPWKAPKSIQEQAGCIVGKDYPRPIVDHDTISKKNIQRMKAAY 487
BLAST of mRNA_Ecto-sp13_S_contig1176.1511.1 vs. uniprot
Match: F2U6L6_SALR5 (DNA photolyase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U6L6_SALR5) HSP 1 Score: 541 bits (1393), Expect = 7.690e-183 Identity = 280/521 (53.74%), Postives = 350/521 (67.18%), Query Frame = 2
Query: 284 SIHWFRKGLRLHDNRALLEACNGTGSLYPLFVLDSDPASPESRAGPLRTTFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPQLFEEWNVKKLTFEADSEPRSRARDKEVGSLAKEAGVQVLIRGTSTLRNLQNYHMLMGKKQGTYLKSYGAFIKLHDNAGPVPDC--APDISEDLPAPGA--SPDDAEYDRFSIPSLTDLGVE--PPEKALKFRGGEREALARLERVMAREDWISKFEKPKTSPNSIEPSTTVLSMYISHGCLSTRRFWHALCKVYTK-KGGSKPPVSLKGQLLWKEFNYFSGYSIPNFDKMVGNPVARQIPWDKDEEKLMAWKEARTGFPWIDAAMTQLKEEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQASLFALFMPITCTLACFDGGYFRCYSPIAFGKKTDKNGDYIKKYLPVLRKFPSKYIYEPWTAPLQVQRGCGCIIGKDYPKPIVDHTDTSKANMAKMHDAYDAHQEAQAA 1825
SIHWFRKGLRLHDN ALL A G +YP+FVLD A PE G +R FLLESL+DLD+ LR GSRL+V++GKP + L + F+EW V +LTFE D+EP ++ RD + LA++ G++V+ TL + + Y G L +Y +F L G VP AP ED P D + RF +PSL D+G E E ++F GGE EAL R+ R + R+ WI+ FEKPKTSPN++EPSTT LS Y+ GCLS R F+H L +VY + + +KPPVSL GQLLW+EF + GY++ NFD+M GN + RQI WD ++ L AW+ ARTG+PWIDA MTQL+ EGW+HHLARHAVACFLTRGDL+QSWE GA VFD LL+DADW +N+ NW WLSCS+FFYQ YFR YSP+AFGKKTD +G YI+KYLP L+ FP KYIYEPW AP VQR CGCIIGKDYP+PIVDH + S AN A++ YDA ++A+ A
Sbjct: 7 SIHWFRKGLRLHDNAALLAALKGAKQVYPVFVLDPHFAKPEF-VGVVRYNFLLESLRDLDKSLRTLGSRLYVLKGKPLQALEEKFKEWEVTRLTFERDTEPYAKLRDTQARELAEKHGIEVITTVGHTLHDPEQYIAKAGGADKIPL-TYSSFGTLFRRLGKVPAALSAP-TKEDFPQSSTLVRTDALDDHRFDVPSLKDMGYEWNDDEHEVRFPGGETEALERMRRHLQRKAWIAHFEKPKTSPNTLEPSTTGLSPYLKFGCLSPRLFYHELARVYAEYRDHAKPPVSLHGQLLWREFFHMCGYAVKNFDRMEGNRICRQIDWDTNDALLAAWENARTGYPWIDACMTQLRREGWLHHLARHAVACFLTRGDLYQSWEKGAQVFDRLLVDADWHLNSANWMWLSCSSFFYQ--------------------YFRVYSPVAFGKKTDPSGAYIRKYLPQLKAFPDKYIYEPWKAPPGVQRSCGCIIGKDYPEPIVDHAEVSAANKARIRACYDALKQAEKA 504
BLAST of mRNA_Ecto-sp13_S_contig1176.1511.1 vs. uniprot
Match: UPI001955C6E5 (cryptochrome circadian regulator 5 n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI001955C6E5) HSP 1 Score: 538 bits (1385), Expect = 5.810e-182 Identity = 279/507 (55.03%), Postives = 340/507 (67.06%), Query Frame = 2
Query: 284 SIHWFRKGLRLHDNRALLEACNGTGSLYPLFVLDSDPASPESRAGPLRTTFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPQLFEEWNVKKLTFEADSEPRSRARDKEVGSLAKEAGVQVLIRGTSTLRNLQNY-HMLMGKKQGTYLKSYGAFIKLHDNAGPVPDCAPDISEDLPAPGASPDDAEYDRFSIPSLTDLGVEPPEKALK-FRGGEREALARLERVMAREDWISKFEKPKTSPNSIEPSTTVLSMYISHGCLSTRRFWHALCKVYTKKGGSKPPVSLKGQLLWKEFNYFSGYSIPNFDKMVGNPVARQIPWDKDEEKLMAWKEARTGFPWIDAAMTQLKEEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQASLFALFMPITCTLACFDGGYFRCYSPIAFGKKTDKNGDYIKKYLPVLRKFPSKYIYEPWTAPLQVQRGCGCIIGKDYPKPIVDHTDTSKANMAKMHDAY 1798
S+HWFRKGLRLHDN AL+ A +YPLF+LD S +R G R FL+E+L+DLD L+ SRLFVV G P EVLP+LFE+W + +LTFE D+EP SR+RD+EV LAKE GV+V+ + + TL N+ GK TY++ + PVP AP ED+ + ++F IP+L DLG++ F GGE+EAL RL+ M R W+ KFEKP+TSPN++ PSTTVLS Y+ GCLS R FW L VY K S+PPVSL GQLLW+EF Y + IPNFD+M GNP Q+ WD E L AW+EARTGFP+IDA MTQL++EGWIHHLARHAVACFLTRGDLW SWE+G VF+ELLLDADWS+N NWQWLS SAFF+Q YFR YSP+AFGKKTDKNGDYIKKYLP+L+KFP++YIYEPW AP +Q GCI+GKDYP+PIVDH K N+ +M AY
Sbjct: 5 SVHWFRKGLRLHDNPALIAALKDCRHIYPLFLLDPW-YSTNTRIGINRWRFLMEALKDLDSSLKKLNSRLFVVSGPPTEVLPKLFEKWEITRLTFEVDTEPYSRSRDEEVMKLAKEYGVEVIPKISHTLYNIDRIIDENNGKTPLTYVRFQSVLKAIGPPKKPVP--AP-TKEDMSGVSTPISEDHEEKFGIPTLEDLGLDASSLGPDLFPGGEQEALRRLDEHMQRPGWVCKFEKPQTSPNALTPSTTVLSPYVRSGCLSARTFWWRLSDVYRAKKHSEPPVSLHGQLLWREFFYTTAVGIPNFDRMEGNPHCVQVDWDNHPEHLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDADWSLNAGNWQWLSASAFFHQ--------------------YFRVYSPVAFGKKTDKNGDYIKKYLPLLKKFPAEYIYEPWKAPRSIQERAGCIVGKDYPRPIVDHEVVHKKNIQRMKAAY 487
BLAST of mRNA_Ecto-sp13_S_contig1176.1511.1 vs. uniprot
Match: H2MAP7_ORYLA (Cryptochrome-1 n=10 Tax=Oryzias TaxID=8089 RepID=H2MAP7_ORYLA) HSP 1 Score: 536 bits (1380), Expect = 3.660e-181 Identity = 282/508 (55.51%), Postives = 343/508 (67.52%), Query Frame = 2
Query: 287 IHWFRKGLRLHDNRALLEACNGTGSLYPLFVLDSDPASPESRAGPLRTTFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPQLFEEWNVKKLTFEADSEPRSRARDKEVGSLAKEAGVQVLIRGTSTLRNLQNY-HMLMGKKQGTYLKSYGAFIKLHDNAGPVPDCAPDISEDLP--APGASPDDAEYDRFSIPSLTDLGVEPPEKALK-FRGGEREALARLERVMAREDWISKFEKPKTSPNSIEPSTTVLSMYISHGCLSTRRFWHALCKVYTKKGGSKPPVSLKGQLLWKEFNYFSGYSIPNFDKMVGNPVARQIPWDKDEEKLMAWKEARTGFPWIDAAMTQLKEEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQASLFALFMPITCTLACFDGGYFRCYSPIAFGKKTDKNGDYIKKYLPVLRKFPSKYIYEPWTAPLQVQRGCGCIIGKDYPKPIVDHTDTSKANMAKMHDAY 1798
IHWFRKGLRLHDN AL+ A LYPLF+LD ++ AG R FL+ SLQDLD LR SRLFVVRGKPEEVLP+LF +WNV KLT+E D+EP SR+RDK V LA+E +QV+ + + TL ++ GK TY + L P+P AP + ED+ AP + EY IPSL +LG++ A + F GGE+EAL RL+ M R W+ FEKP TSPNS+ PSTTVLS Y++ GCLS R FW L +VY K S PPVSL GQLLW+EF Y + IPNF+KM GNP Q+ WD+++E L AW+EARTGFP+IDA MTQL++EGWIHHLARHAVACFLTRGDLW SWE+G VF++LLLD DW++N NWQWLS S FF+Q +FR YSP+AFGKKTDKNGDYIKKYLP+L+KFP +YIYEPW AP VQ+ GCI+GKDYPKPI++H SK N+ +M AY
Sbjct: 6 IHWFRKGLRLHDNPALMAALRDCKELYPLFILDPY-LYDQNLAGINRLRFLISSLQDLDCSLRKLNSRLFVVRGKPEEVLPKLFTKWNVTKLTYEYDTEPYSRSRDKNVTMLAEEQRIQVIYKISHTLYDIDRIIEENNGKPPLTYNRLRDIVKALGSPKKPIP--APTV-EDMKNIAPFSEKHKPEY---GIPSLEELGLDTSSLAEEIFPGGEQEALRRLDTYMQRPGWVCSFEKPNTSPNSLSPSTTVLSPYVTFGCLSARTFWWRLAEVYQGKKHSDPPVSLHGQLLWREFFYTASVGIPNFNKMTGNPACTQVDWDENQEYLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEKLLLDGDWALNAGNWQWLSASTFFHQ--------------------FFRVYSPVAFGKKTDKNGDYIKKYLPILKKFPPQYIYEPWKAPRSVQQAAGCIVGKDYPKPIIEHEVISKKNIQRMKQAY 486
BLAST of mRNA_Ecto-sp13_S_contig1176.1511.1 vs. uniprot
Match: W7TK49_9STRA (6-4 photolyase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TK49_9STRA) HSP 1 Score: 538 bits (1386), Expect = 4.900e-181 Identity = 282/537 (52.51%), Postives = 356/537 (66.29%), Query Frame = 2
Query: 284 SIHWFRKGLRLHDNRALLEACNGTGSLYPLFVLDSDPASPESRAGPLRTTFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPQLFEEWNVKKLTFEADSEPRSRARDKEVGSLAKEAGVQVLIRGTSTLRNLQNY-HMLMGKKQGTYLKSYGAFIKLHDNAGPVPDCAPDI-SEDLPAPG------------------ASPDDAEYDR-----FSIPSLTDLGVEPPEKALKFRGGEREALARLERVMAREDWISKFEKPKTSPNSIEPSTTVLSMYISHGCLSTRRFWHALCKVYTKKGG--SKPPVSLKGQLLWKEFNYFSGYSIPNFDKMVGNPVARQIPWDKDEEKLMAWKEARTGFPWIDAAMTQLKEEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQASLFALFMPITCTLACFDGGYFRCYSPIAFGKKTDKNGDYIKKYLPVLRKFPSKYIYEPWTAPLQVQRGCGCIIGKDYPKPIVDHTDTSKANMAKMHDAYDAHQE 1813
S+HWFRKGLRLHDN ALLEAC G +YP+F+LD A P+ G LR F+L+++++LD+ LR GSRLFVV+G+P E LP+LF EW V KLTFE+D+EP ++ RD+ V LA E V V + TL + + Y L GK T Y +F+KL + GPV A + ++ LP P A ++ E DR FS+P L+ +G + + GGE ALAR++ +A +I FEKPKTSPN++ PSTTVLS Y+ HG LS+R F+H+L + + G ++PPVSL GQLLW+EF Y G++ PNFDKMVGNP+ RQIPW K+ E L AW+EARTG+P+IDA MTQL+EEGWIHHLARHA+ACFLTRGDLWQSWE+GA VF++ LLDADWS+N NW WLS SAFF+Q YFR YSP+AFG KTDK G+YI+KYLPVLRK P KYIYEPW AP VQ GC++G+DYP P+VDH SK M KM AYDA++E
Sbjct: 50 SLHWFRKGLRLHDNPALLEACEGATHVYPVFILDPHFAKPDV-IGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGVTKLTFESDTEPYAKVRDRHVCELAAEHQVHVQTFPSHTLHDPEAYVARLQGKDVPTV---YQSFVKLFASMGPVAPVASTVDAKRLPPPALEYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVPGLSGIGYPETDAPTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQ--------------------YFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKE 562
BLAST of mRNA_Ecto-sp13_S_contig1176.1511.1 vs. uniprot
Match: Q9I911_DANRE (6-4 photolyase n=4 Tax=Danio rerio TaxID=7955 RepID=Q9I911_DANRE) HSP 1 Score: 535 bits (1378), Expect = 6.840e-181 Identity = 280/507 (55.23%), Postives = 340/507 (67.06%), Query Frame = 2
Query: 287 IHWFRKGLRLHDNRALLEACNGTGSLYPLFVLDSDPASPES-RAGPLRTTFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPQLFEEWNVKKLTFEADSEPRSRARDKEVGSLAKEAGVQVLIRGTSTLRNLQNY-HMLMGKKQGTYLKSYGAFIKLHDNAGPVPDCAPDISEDLPAPGASPDDAEYDRFSIPSLTDLGVEPPEKALK-FRGGEREALARLERVMAREDWISKFEKPKTSPNSIEPSTTVLSMYISHGCLSTRRFWHALCKVYTKKGGSKPPVSLKGQLLWKEFNYFSGYSIPNFDKMVGNPVARQIPWDKDEEKLMAWKEARTGFPWIDAAMTQLKEEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQASLFALFMPITCTLACFDGGYFRCYSPIAFGKKTDKNGDYIKKYLPVLRKFPSKYIYEPWTAPLQVQRGCGCIIGKDYPKPIVDHTDTSKANMAKMHDAY 1798
IHWFRKGLRLHDN AL+ A +YPLF+LD P P++ R G R FL+E+L+DLD L+ SRLFVVRG P EVLP+LF++W + +LTFE D+EP S++RDKEV LAKE GV+V + + TL N+ GK TY++ + P+P AP +ED+ D ++F IP+L DLG++ F GGE+EAL RL+ M R +W+ KFEKPKTSPNS+ PSTTVLS Y+ GCLS R FW L VY K S PPVSL GQLLW+EF Y + IPNF+KM GN Q+ WD + E L AW+EARTGFP+ID MTQL++EGWIHHLARHAVACFLTRGDLW SWE+G VF+ELLLD+DWS+N NWQWLS S FF+Q YFR YSPIAFGKKTDK+GDYIKKYLPVL+KFP++YIYEPW AP VQ GCI+GKDYP+PIVDH K N+ +M AY
Sbjct: 6 IHWFRKGLRLHDNPALIAALKDCRHIYPLFLLD--PWFPKNTRIGINRWRFLIEALKDLDSSLKKLNSRLFVVRGSPTEVLPKLFKQWKITRLTFEVDTEPYSQSRDKEVMKLAKEYGVEVTPKISHTLYNIDRIIDENNGKTPMTYIRLQSVVKAMGHPKKPIP--AP-TNEDMRGVSTPLSDDHEEKFGIPTLEDLGLDTSSLGPHLFPGGEQEALRRLDEHMERTNWVCKFEKPKTSPNSLIPSTTVLSPYVRFGCLSARTFWWRLADVYRGKTHSDPPVSLHGQLLWREFFYTTAVGIPNFNKMEGNSACVQVDWDNNPEHLAAWREARTGFPFIDTIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDSDWSLNAGNWQWLSASTFFHQ--------------------YFRVYSPIAFGKKTDKHGDYIKKYLPVLKKFPTEYIYEPWKAPRSVQERAGCIVGKDYPRPIVDHEVVHKKNILRMKAAY 487
BLAST of mRNA_Ecto-sp13_S_contig1176.1511.1 vs. uniprot
Match: A0A668AA89_9TELE (Cryptochrome-1-like n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A668AA89_9TELE) HSP 1 Score: 535 bits (1378), Expect = 6.840e-181 Identity = 286/507 (56.41%), Postives = 341/507 (67.26%), Query Frame = 2
Query: 287 IHWFRKGLRLHDNRALLEACNGTGSLYPLFVLDSDPASPES-RAGPLRTTFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPQLFEEWNVKKLTFEADSEPRSRARDKEVGSLAKEAGVQVLIRGTSTLRNLQNY-HMLMGKKQGTYLKSYGAFIKLHDNAGPVPDCAPDISEDLPAPGASPDDAEYDRFSIPSLTDLGVEPPEKAL-KFRGGEREALARLERVMAREDWISKFEKPKTSPNSIEPSTTVLSMYISHGCLSTRRFWHALCKVYTKKGGSKPPVSLKGQLLWKEFNYFSGYSIPNFDKMVGNPVARQIPWDKDEEKLMAWKEARTGFPWIDAAMTQLKEEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQASLFALFMPITCTLACFDGGYFRCYSPIAFGKKTDKNGDYIKKYLPVLRKFPSKYIYEPWTAPLQVQRGCGCIIGKDYPKPIVDHTDTSKANMAKMHDAY 1798
IHWFRKGLRLHDN AL+ A LYP+FVLD P S S G R FL+ +L+DLD LR SRLFVVRGKPEEV P+LF +WNV KLT+E D+EP S + DK+V +LAKE GV+V+ + + TL N+ GK TY + L PVP AP I +D+ D ++ IP+L +LG + + KF GGE+EAL RL+ M R WI FEKP+TSPNS+ PSTTVLS Y++ GCLS R FW L VY K S PPVSL GQLLW+EF Y + IPNF+KMVGNPV QI WD + E L AW+EARTGFP+IDA MTQL++EGWIHHLARHAVACFLTRGDLW SWE+G VF+ELLLD DW++N NWQWLS SAFF+Q YFR YSPIAFGKKTDKNGDYIKKYLP+L+KFP++YIYEPW AP VQ+ GCI+GKDYP P+V+H SK N+ +M AY
Sbjct: 6 IHWFRKGLRLHDNPALVAALRECKELYPVFVLD--PYSYNSTHVGINRWRFLIGALKDLDCSLRKLNSRLFVVRGKPEEVFPKLFNKWNVTKLTYEYDTEPYSLSTDKKVTTLAKEHGVEVIYKISHTLYNIDRIIEENNGKAPLTYNRLQSVVKTLGPPKRPVP--APTI-DDMKGVKTPYTDKHEKKYGIPTLEELGYDTASLSEEKFPGGEQEALKRLDEHMKRTGWICSFEKPQTSPNSLSPSTTVLSPYVTFGCLSARTFWWRLTDVYQGKKHSDPPVSLHGQLLWREFFYTASVGIPNFNKMVGNPVCTQIDWDTNTEYLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDGDWALNAGNWQWLSASAFFHQ--------------------YFRVYSPIAFGKKTDKNGDYIKKYLPLLKKFPAQYIYEPWKAPRSVQQAAGCIVGKDYPHPVVEHEVISKKNIQRMKIAY 487
BLAST of mRNA_Ecto-sp13_S_contig1176.1511.1 vs. uniprot
Match: A0A3Q2CCJ5_CYPVA (Cryptochrome-1-like n=2 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2CCJ5_CYPVA) HSP 1 Score: 532 bits (1371), Expect = 8.320e-180 Identity = 273/506 (53.95%), Postives = 339/506 (67.00%), Query Frame = 2
Query: 287 IHWFRKGLRLHDNRALLEACNGTGSLYPLFVLDSDPASPESRAGPLRTTFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPQLFEEWNVKKLTFEADSEPRSRARDKEVGSLAKEAGVQVLIRGTSTLRNLQNY-HMLMGKKQGTYLKSYGAFIKLHDNAGPVPDCAPDISEDLPAPGASPDDAEYDRFSIPSLTDLGVEPPEKALK-FRGGEREALARLERVMAREDWISKFEKPKTSPNSIEPSTTVLSMYISHGCLSTRRFWHALCKVYTKKGGSKPPVSLKGQLLWKEFNYFSGYSIPNFDKMVGNPVARQIPWDKDEEKLMAWKEARTGFPWIDAAMTQLKEEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQASLFALFMPITCTLACFDGGYFRCYSPIAFGKKTDKNGDYIKKYLPVLRKFPSKYIYEPWTAPLQVQRGCGCIIGKDYPKPIVDHTDTSKANMAKMHDAY 1798
IHWFRKGLRLHDN AL+ A LYP+F++D + S E G R FL+ +L+DLD LR SRLFV+RGKPEEV P+LF +W V KLT+E D+EP S +RD++V SLAKE G+ V+ + + TL N++ GK TY + KL P+P D +D+ P + D+ +Y IP+L + G++ + F GGE+EAL RL+ M + W+ FEKP+TSPNS+ PSTTVLS Y++ GCLS R FW L +VY K S PPVSL GQLLW+EF Y IPNF+KM GN V Q+ WD +++ L AW+EARTGFP+IDA MTQL++EGWIHHLARHAVACFLTRGDLW SWE+G VF+ELLLD DW++N NWQWLS SAFF+Q +FR YSPIAFGKKTDKNGDYIKKYLP+L KFP +YIYEPW AP VQ+ GCI+GKDYP PIV H SK N+ +M +AY
Sbjct: 6 IHWFRKGLRLHDNPALIAALKDCKELYPVFIMDPNLHSTE--VGINRWRFLIGALKDLDSSLRKLNSRLFVLRGKPEEVFPKLFSKWKVTKLTYEYDTEPYSLSRDEKVTSLAKETGIDVIYKISHTLFNIERIIEENDGKPPLTYKRLQAIVAKLGPPKKPIPAPTLDDMKDVKTPCSEKDEKKY---GIPTLEEFGLDSTSLGEELFPGGEQEALRRLDEHMKKTGWVCSFEKPQTSPNSLSPSTTVLSPYVTFGCLSARTFWWRLTEVYRGKKHSDPPVSLHGQLLWREFFYTCSLGIPNFNKMKGNTVCTQVDWDTNQDYLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDGDWALNAGNWQWLSASAFFHQ--------------------FFRVYSPIAFGKKTDKNGDYIKKYLPLLEKFPPQYIYEPWKAPRSVQQAAGCIVGKDYPHPIVQHEQVSKKNIQRMKEAY 486 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1176.1511.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1176.1511.1 >prot_Ecto-sp13_S_contig1176.1511.1 ID=prot_Ecto-sp13_S_contig1176.1511.1|Name=mRNA_Ecto-sp13_S_contig1176.1511.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=621bp MQTRGALLGFLLIRPNCSVSRVGTAVVRPAPRTGAINLLHRTRASATSAAback to top mRNA from alignment at Ecto-sp13_S_contig1176:936..8150- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1176.1511.1 ID=mRNA_Ecto-sp13_S_contig1176.1511.1|Name=mRNA_Ecto-sp13_S_contig1176.1511.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7215bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1176:936..8150- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1176:936..8150- >mRNA_Ecto-sp13_S_contig1176.1511.1 ID=mRNA_Ecto-sp13_S_contig1176.1511.1|Name=mRNA_Ecto-sp13_S_contig1176.1511.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1863bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1176:936..8150- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |