mRNA_Ecto-sp13_S_contig11756.1510.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig11756.1510.1
Unique Name	mRNA_Ecto-sp13_S_contig11756.1510.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: D7FPC2_ECTSI (Tudor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC2_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 1.190e-103
Identity = 155/158 (98.10%), Postives = 158/158 (100.00%), Query Frame = 1

Query:    1 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHEELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 474
            VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHEELWGWLEPYMDDE++FKPSPTEGSMTMGKWVRKIIS+MQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE
Sbjct:  121 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHEELWGWLEPYMDDEKKFKPSPTEGSMTMGKWVRKIISDMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 278

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BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: A0A6H5KEK1_9PHAE (Tudor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK1_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 9.930e-99
Identity = 154/178 (86.52%), Postives = 156/178 (87.64%), Query Frame = 1

Query:    1 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHE--------------------ELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 474
            VVDEIY YCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHE                    ELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKIIS+M YYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADE+NDPSWYDAVINSVE
Sbjct:   89 VVDEIYRYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHEDSPFIRAIGFLYLRYTCPPKELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKIISDMHYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEDNDPSWYDAVINSVE 266

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BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: A0A7S2UU23_9STRA (Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU23_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.150e-54
Identity = 93/169 (55.03%), Postives = 115/169 (68.05%), Query Frame = 1

Query:   31 HVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHEE--------------------LWGWLEPYMDDEEEFKPSPTEGS-MTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 474
            HVAPW  GT+R PS+AFCLLMK   ++LT  QM  +L H++                    LW W+EP++DDEEE  PSP   S MTMG++V+KI+S+MQYYGTMLPRIPV IERKMKV +LLHEE KKR   N    + LKPG K+RAIY+D +NDP+WY+A I  VE
Sbjct:    3 HVAPWQTGTTRTPSTAFCLLMKFLCMRLTEKQMLGLLHHQDSPYIRAIGFLYLRYTHPPKLLWDWIEPFLDDEEEITPSPDPSSKMTMGQYVQKIVSDMQYYGTMLPRIPVPIERKMKVLMLLHEEKKKRAALNRSQRHRLKPGAKIRAIYSDADNDPAWYEAEILQVE 171

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BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: A0A7S3YJF6_HETAK (Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJF6_HETAK)

HSP 1 Score: 173 bits (439), Expect = 3.570e-52
Identity = 96/173 (55.49%), Postives = 114/173 (65.90%), Query Frame = 1

Query:   16 YSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHEE--------------------LWGWLEPYMDDEEEFKP-SPTEGSMTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSV 471
            Y+    V PW+ GTSRVPSSAFCLL KL + +LT  QM+ IL H +                    L  W EP++DDEEEF P +    +MT+G++V KII++MQYYGTMLPRIPV IERKMKV LLLHEE  KR  AN RIV  L+ G +VRAIY DEENDP+WYDA I  V
Sbjct:    1 YNKVGTVEPWSTGTSRVPSSAFCLLFKLCMFQLTERQMHSILNHPDSPYIRALGFLYLRYTMAPRNLMRWFEPFLDDEEEFAPGADPNATMTVGQFVHKIITDMQYYGTMLPRIPVPIERKMKVLLLLHEEKNKRAVANQRIVRQLQAGARVRAIYGDEENDPAWYDAEILEV 173

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BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: A0A6A3QKY3_9STRA (Pre-mRNA-splicing factor 38 n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6A3QKY3_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.120e-49
Identity = 92/179 (51.40%), Postives = 115/179 (64.25%), Query Frame = 1

Query:    1 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVH--------------------EELWGWLEPYMDDEEEFKPSPTEG-SMTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 474
            VVDEIY   DH  PW+PGT+R+PSS FCLL K F+++LTR QM  +L H                    EELW W EPY++D EEF  S       T+G+W+  ++ E  Y+GT+LPRIP  IE  +KV+LLL    K+R K N  IV+ LKPGTKVRA+YADEEN+P+ YDAVI SVE
Sbjct:   74 VVDEIYYRVDHAEPWSPGTARIPSSCFCLLHKFFLMRLTRKQMQGLLRHTDSPYIRVVGFLYLRFTCDPEELWTWFEPYLEDPEEFNASANPSLKTTIGEWLVSLLEENNYFGTILPRIPKKIEDGIKVKLLLLSRKKERAKENLAIVDRLKPGTKVRAMYADEENEPAMYDAVITSVE 252

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BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: K3WW49_GLOUD (Pre-mRNA-splicing factor 38 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WW49_GLOUD)

HSP 1 Score: 173 bits (439), Expect = 4.860e-49
Identity = 88/179 (49.16%), Postives = 119/179 (66.48%), Query Frame = 1

Query:    1 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVH--------------------EELWGWLEPYMDDEEEFKPSPTEG-SMTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 474
            VVDEIY   DH  P +PGT+R+PS+ FCLL K F+++LT  QM  +L H                    E+LWGW EPY+DD+EEF  +       T+G+W+  ++ ++ Y+GT+LPRIP  IE  +KV+LLLH   K+RE+AN  IV  LKPGTK+RA+YADE+N+P+ YDAVI+SVE
Sbjct:   76 VVDEIYYRVDHAEPLSPGTARIPSTCFCLLHKFFLMRLTMKQMQGLLKHTDSPYIRAVGFLYLRYTCDPEKLWGWYEPYLDDKEEFNAAANPNVKTTIGEWLVGLLEDINYFGTILPRIPKKIEDSIKVKLLLHGRKKEREQANLSIVEFLKPGTKIRAMYADEDNEPAMYDAVIDSVE 254

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BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: A0A0P1ARE8_PLAHL (Pre-mRNA-splicing factor 38 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ARE8_PLAHL)

HSP 1 Score: 170 bits (431), Expect = 5.950e-48
Identity = 89/179 (49.72%), Postives = 115/179 (64.25%), Query Frame = 1

Query:    1 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVH--------------------EELWGWLEPYMDDEEEFKPSPTEG-SMTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 474
            VVDEIY   DH  PW+PGT+R+PSS FCLL K  +++LTR QM  +L H                    +ELW W EPY++D EEF  S       T+G+W+ +++ E  Y+GT+LPRIP  IE  +KV+LLL    KKR K N  I++ LKPGTKVR++YADEEN+P+ YDAVI SVE
Sbjct:   74 VVDEIYYRVDHAEPWSPGTARIPSSCFCLLHKFCLMRLTRKQMQGLLRHKDSPYIRVVGFLYLRFTCDPDELWTWFEPYLEDSEEFNASANPSIKTTIGEWLIRLLEENNYFGTILPRIPKKIEDGIKVKLLLLSRKKKRAKENLAIISHLKPGTKVRSMYADEENEPAMYDAVIESVE 252

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BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: A0A8K1CAH7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAH7_PYTOL)

HSP 1 Score: 168 bits (425), Expect = 7.200e-48
Identity = 88/179 (49.16%), Postives = 116/179 (64.80%), Query Frame = 1

Query:    1 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVH--------------------EELWGWLEPYMDDEEEFKPSPTEGSMT-MGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 474
            VVDEIY   DH  P+APGT+R+PS+ FCLL K F ++LT  QMN +L H                    EELW W  PY++D EEF  S      T +GKW++ ++ E  Y+GT+LPRIP      +KV+LLLH+  ++RE+AN  IV  LKPGTKVRA+YAD+EN+P+ Y+AVI+SVE
Sbjct:   74 VVDEIYYRVDHAEPFAPGTARMPSTCFCLLFKCFTMRLTVKQMNGLLKHTDSPYIRAIGFLYLRYAGEPEELWKWFAPYLNDTEEFNASANPNDKTTIGKWLKGLLEENNYFGTILPRIPKKHLDNIKVRLLLHDRCQEREQANLSIVKYLKPGTKVRALYADDENEPAMYEAVIDSVE 252

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BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: A0A225VT78_9STRA (Pre-mRNA-splicing factor 38 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VT78_9STRA)

HSP 1 Score: 168 bits (426), Expect = 8.310e-48
Identity = 89/179 (49.72%), Postives = 113/179 (63.13%), Query Frame = 1

Query:    1 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVH--------------------EELWGWLEPYMDDEEEFKPSPTEG-SMTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 474
            VVDEIY   DH  PW+PGT+R+PSS FCLL K F+++LTR QM  +L H                    EELW W EPY+ D EEF  S       T+G+W+  ++    Y+GT+LPRIP  IE  +KV+LLL    K+R K N  IV+ LKPG K+RA+YADEEN+P+ YDAVI+SVE
Sbjct:   74 VVDEIYYRVDHAEPWSPGTARIPSSCFCLLHKFFLMRLTRKQMQGLLRHKDSPFIRVVGFLYLRFTCDPEELWTWFEPYLADPEEFNASANPSLKTTIGEWLVSLLEANNYFGTILPRIPKKIEDLIKVKLLLFNHKKERAKENLAIVDRLKPGIKIRAMYADEENEPAMYDAVIDSVE 252

[Close]

BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: A0A7S2B1R6_9STRA (Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B1R6_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.060e-47
Identity = 85/178 (47.75%), Postives = 111/178 (62.36%), Query Frame = 1

Query:    1 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHEE--------------------LWGWLEPYMDDEEEFKPSPT-EGSMTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSV 471
            VVDEIY  C +V PW+PGT R+PS+AFCLL KL  ++LT   M  +L H +                    +W W E Y+ DEEEF P+   E  MT+GKW  KI+++M YY TMLPRIPV +ERK+K  L+L E+ ++R   N   V+ L  G +VRAIY DE+NDP+WY AV+N V
Sbjct:  108 VVDEIYHKCKNVEPWSPGTQRLPSTAFCLLTKLLTLRLTTKMMQGMLSHRDSPYIRAIGFLYIRVATEPKNIWNWFEEYIADEEEFAPTADPELKMTIGKWCTKILTDMSYYNTMLPRIPVPVERKIKAYLILFEDEQRRAGDNMAFVSELVSGLEVRAIYGDEDNDPAWYPAVVNEV 285

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FPC2_ECTSI	1.190e-103	98.10	Tudor domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KEK1_9PHAE	9.930e-99	86.52	Tudor domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A7S2UU23_9STRA	1.150e-54	55.03	Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Fib...	[more]
A0A7S3YJF6_HETAK	3.570e-52	55.49	Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Het...	[more]
A0A6A3QKY3_9STRA	1.120e-49	51.40	Pre-mRNA-splicing factor 38 n=20 Tax=Phytophthora ...	[more]
K3WW49_GLOUD	4.860e-49	49.16	Pre-mRNA-splicing factor 38 n=1 Tax=Globisporangiu...	[more]
A0A0P1ARE8_PLAHL	5.950e-48	49.72	Pre-mRNA-splicing factor 38 n=1 Tax=Plasmopara hal...	[more]
A0A8K1CAH7_PYTOL	7.200e-48	49.16	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A225VT78_9STRA	8.310e-48	49.72	Pre-mRNA-splicing factor 38 n=1 Tax=Phytophthora m...	[more]
A0A7S2B1R6_9STRA	1.060e-47	47.75	Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Flo...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig11756	contig	Ecto-sp13_S_contig11756:2023..4874 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	0
Start	0
Seed ortholog score	321.6
Seed ortholog evalue	2e-85
Seed eggNOG ortholog	2880.D7FPC2
Preferred name	PRPF38B
Model size	474
KEGG ko	ko:K12850
KEGG Pathway	ko03040,map03040
Hectar predicted targeting category	other localisation
GOs	GO:0000375,GO:0000377,GO:0000398,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0008380,GO:0009628,GO:0009651,GO:0009987,GO:0010035,GO:0010038,GO:0010226,GO:0010467,GO:0016070,GO:0016071,GO:0032991,GO:0034641,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0071011,GO:0071704,GO:0090304,GO:1901360,GO:1990904
Exons	4
EggNOG free text desc.	RNA splicing
EggNOG OGs	KOG2888@1,KOG2888@2759
Cds size	474
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko03041

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462619.1297877-CDS-Ecto-sp13_S_contig11756:2022..2172	1681462619.1297877-CDS-Ecto-sp13_S_contig11756:2022..2172	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig11756 2023..2172 +
1681462619.1413736-CDS-Ecto-sp13_S_contig11756:3458..3565	1681462619.1413736-CDS-Ecto-sp13_S_contig11756:3458..3565	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig11756 3459..3565 +
1681462619.1513104-CDS-Ecto-sp13_S_contig11756:3775..3860	1681462619.1513104-CDS-Ecto-sp13_S_contig11756:3775..3860	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig11756 3776..3860 +
1681462619.1614165-CDS-Ecto-sp13_S_contig11756:4742..4874	1681462619.1614165-CDS-Ecto-sp13_S_contig11756:4742..4874	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig11756 4743..4874 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig11756.1510.1	prot_Ecto-sp13_S_contig11756.1510.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig11756 2023..4874 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig11756:2023..4874+
coding sequence from alignment at Ecto-sp13_S_contig11756:2023..4874+

protein sequence of mRNA_Ecto-sp13_S_contig11756.1510.1

>prot_Ecto-sp13_S_contig11756.1510.1 ID=prot_Ecto-sp13_S_contig11756.1510.1|Name=mRNA_Ecto-sp13_S_contig11756.1510.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=158bp
VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHE
ELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKIISEMQYYGTMLPRIPV
LIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWY
DAVINSVE

mRNA from alignment at Ecto-sp13_S_contig11756:2023..4874+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig11756.1510.1 ID=mRNA_Ecto-sp13_S_contig11756.1510.1|Name=mRNA_Ecto-sp13_S_contig11756.1510.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2852bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11756:2023..4874+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTGGTGGATGAGATCTACTCGTACTGCGACCACGTGGCCCCCTGGGCGCC
CGGCACGAGCAGGGTCCCCTCCTCAGCGTTCTGCCTGCTCATGAAGCTCT
TCGTGATCAAGCTCACCAGGCCGCAGATGAACGAGATCCTGGTGCACGAG
GTGTGTGCAGGTTTGTGACTGACTGAGTGACCTCAAGTGTTGTTGTTAGT
TGTTACAGTGTTCCGGGGATAGGTAGTCGCCGGGCGTGTATGTAGTGGCG
GGACCTATCTTGTGTGTTTCTCCTCGTGCTTTCGGAAGAATTGTTTTCTT
TGATCGGATGGACATCTGTCGTTGGTGTTGTACACCTTTTTCGAACGCGC
CGGTGTTTCTGGTTGTCGCTCCTGTTGGTGCTGTGTTGGTCCTTCCAGTC
ATGGTTGAATGTTTTTTTTTTCTGGCGCTCCGGATTCCCCGCTTCTTTTT
TGTCGTAACATGCCATGAAAGACTGCGTGGCCAATAGTTCTCACGCCTGT
AGCACGACATGCCGCAGCCAGTAGCGGAAGAAACCGAGTGTTTTTTAGCA
TCGTTACAGTATTGCCACTAAACCCTTTTACTATTCTTGCGTGCCCGCCC
CCACCTGTCTCTTCCATGTTAACTCAATCCGATGTGCGTGTCCCCCCCCC
CCCCCCCACGCCCGCCCCCCCCCCCGCCCACCTGCGTCTTTGCAACCCCC
AACACNNNNNNNNNNATATTGCCCCCAAACCCTTTTACTCTTCTTCCCTC
CCCCCCCCCCCCTGTTTCTTCCTTGTTTTCTCAATCCGTTGTGCGTGCCC
CCCCCCCCCCCGAAGGACTCGCCCTTCATCCGAGCAATCGGGTTTCTGTA
CCTCCGCTACACCTGCCCCCCCAAGGTGCGCGAGCGTTTGAATTTGGGTT
CACCCTGCCAACTGCTGTCGGCGAGTGGTCAGTTCCGGCAAGGGTTCCCC
TGTTGTGTCGTAGGCTCTGCTATCCTTCTTCCCTTGCCGAAGGATGTTGT
TGGCTGGTGTAGAGTTCCCGGACTAGGGGCGTCGCCGGGAGTGCATAAAC
GGCAGTCTGTCTCTCCTCTGCTTGTTTATATTCTCGAATATATAAGGGTC
GTTGGTTGTTGGGTTCATTGCAGGAACGGTGGGCCGCGGCTTCGTCAGTC
TCTTGGTGTCGTTGTTCTTGTTGTGCCGTTCTTTTTTGGTCGCTGCATTC
GCCGTAGTGGGCCGAGCGGGAGTGTTGCTGATGTTTTCTTGTCGTCCACT
TTCTCGTTCCTGTCATTATCTGGGGCTCCGTGTCATGTGTTGGAGGTCGT
TACCCCTCCTCCCCACTACCACCAAGTTCTGCTGTTGCTGATTGCAGCAC
TTGTAGGCGTGACGATGGGGGGCAAGTTGTTAGTTGACGTGGGTGCGCTT
TTTCCCTGCCCCGCCGACGCGCTTGGTTGATCGTAGGAGCTTTGGGGGTG
GCTGGAGCCGTACATGGATGACGAAGAAGAGTTCAAGCCGTCCCCCACGG
AAGGGAGTATGACCATGGGCAAGTGGGTCCGCAAGATTATCAGGTGAGAA
CGGCAACGATTTCATTGTTCCCCCGCGCGTCAACGGTCTATCGACTTCGG
CATCACGACTATGAGTACCCCTCCCCCCCCCCGTGTTTTTCTTAGATCTG
TGTCCCAAAACCCGCTGGTGATTGATTCACGTCTCCCCCTCTGCTCCTTG
GCCCAATCGATCTTACGCGCATGCTTCATTTCGTTCCCCCCCGTTGTGCG
CAGTGAGATGCAGTACTACGGGACCATGCTCCCTCGCATCCCGGTGCTGA
TCGAGAGGAAGATGAAGGTTCAGCTGCTACTGCACGAGGTGGGTGGTCAG
TTTCCGCCTGCCGTATTAGTTTACCTTCGCGACGACTTGTTGCCGAGGTT
ATTAGAACGGTTGAGAGCGACTGTGGTCGATGCGTTTGCTTCGAATATCC
GATCGTTGTCGTTAACGATTCGGCGTGTAGAAGAATCGGGAAGGTATGCA
TGTACCGTGGGCGCTTCTCTTGCGAACGCGTGGAAGTTGGAGATCTGCAC
TGCGTGAGTCGCTGAGTGCGTTTGCCATCCGTCGATTACGCACAGAGACC
TTTTCATGGTTTCTGCCATGGTGCAATTGCCATTGCATGGTTTCGCCCCA
CAAACGGTATGCCGACGCTGTCTAATTGCAGCAGCGGAATGGTTTGCATG
TGCGTCTCCGTGAAGGTGTTCGCGTTGTTTCACTACTTCGGTCATCATGT
ATTAGCGGATGTTTCAACTTCCCGGTTCTGCCCCCCCTGCCATGTCCTTG
ATTGAACTTCGTGGGTGTAGTCTGGAGACCTCTGTACCGCCCAGGCCACA
TCTGGTCGTCTTGCATGTTGTTCTTGTTCTTCCCTTCGAGCATCGCGTTC
TCGATTCGATAGCGCGGGATGTTCATTTGCTCGGCTTTTTTGCCAACAGC
CCAAGCACTCTCTCGCTACTACGGCACCCGCCATCGCGGCGTTTTCATTG
GCTTGGCTTACTTGTGCAGCATGAGAAACCAACAACCCAGCACTGTTTCA
CTAGCACCTGCCATTGCGGCGTAGTCATTAGCTTGCCTTACTTGTGCAGC
ATCAAAAACCAACAACCCAGCACTCTTGCACCAACACCCACCATCGCAGC
ATAGTCGCTAACTTGTTGGAATTTTCGCTGCAGTCTAAGCCAACAACACC
TCCGCACCAACGACGAGCAGGAGATGAAGAAGAGGGAGAAGGCCAACTTC
CGAATCGTGAACCTCCTCAAGCCCGGCACGAAGGTCCGAGCCATCTACGC
GGACGAGGAGAACGACCCTTCTTGGTACGACGCCGTCATCAACAGCGTCG
AG

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11756:2023..4874+

>mRNA_Ecto-sp13_S_contig11756.1510.1 ID=mRNA_Ecto-sp13_S_contig11756.1510.1|Name=mRNA_Ecto-sp13_S_contig11756.1510.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=474bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11756:2023..4874+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTGGTGGATGAGATCTACTCGTACTGCGACCACGTGGCCCCCTGGGCGCC
CGGCACGAGCAGGGTCCCCTCCTCAGCGTTCTGCCTGCTCATGAAGCTCT
TCGTGATCAAGCTCACCAGGCCGCAGATGAACGAGATCCTGGTGCACGAG
GAGCTTTGGGGGTGGCTGGAGCCGTACATGGATGACGAAGAAGAGTTCAA
GCCGTCCCCCACGGAAGGGAGTATGACCATGGGCAAGTGGGTCCGCAAGA
TTATCAGTGAGATGCAGTACTACGGGACCATGCTCCCTCGCATCCCGGTG
CTGATCGAGAGGAAGATGAAGGTTCAGCTGCTACTGCACGAGGAGATGAA
GAAGAGGGAGAAGGCCAACTTCCGAATCGTGAACCTCCTCAAGCCCGGCA
CGAAGGTCCGAGCCATCTACGCGGACGAGGAGAACGACCCTTCTTGGTAC
GACGCCGTCATCAACAGCGTCGAG