prot_Ecto-sp13_S_contig11746.1502.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11746.1502.1
Unique Nameprot_Ecto-sp13_S_contig11746.1502.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length160
Homology
BLAST of mRNA_Ecto-sp13_S_contig11746.1502.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 6.070e-45
Identity = 104/114 (91.23%), Postives = 106/114 (92.98%), Query Frame = 0
Query:    1 MAQTDRDALVALYRATGGENWRESLNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQLRLSWNKLSGEWFQXXXXXXXXXXXXXXXXXXXXXQLSGPI 114
            MAQTDRDALV LYRATGGENWRE  NWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLG+L NLQQL LS NKLSG WF XXXXXXXXXXXXXXXXXXXXXQL+GPI
Sbjct:    1 MAQTDRDALVVLYRATGGENWRERQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGNLQQLHLSSNKLSGRWFXXXXXXXXXXXXXXXXXXXXXXQLTGPI 114          
BLAST of mRNA_Ecto-sp13_S_contig11746.1502.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 2.510e-44
Identity = 72/73 (98.63%), Postives = 72/73 (98.63%), Query Frame = 0
Query:    1 MAQTDRDALVALYRATGGENWRESLNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQ 73
            MAQTDRDALVALYRATGGENWRES NWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQ
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQ 73          
BLAST of mRNA_Ecto-sp13_S_contig11746.1502.1 vs. uniprot
Match: A0A6H5K3C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C2_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 6.910e-28
Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 MAQTDRDALVALYRATGGENWRESLNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEG 59
            MAQTDRDALVA+YRATGGE W  S NWDTD+DLKTWHGV+VNDQGRVVKL+L  NNLEG
Sbjct:    1 MAQTDRDALVAMYRATGGEKWSTSQNWDTDSDLKTWHGVNVNDQGRVVKLELGFNNLEG 59          
BLAST of mRNA_Ecto-sp13_S_contig11746.1502.1 vs. uniprot
Match: A0A6H5K3D6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D6_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 1.140e-25
Identity = 49/80 (61.25%), Postives = 57/80 (71.25%), Query Frame = 0
Query:    4 TDRDALVALYRATGGENWRESLNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQLRLSWNKLSG 83
            TDR ALVAL+ ATGG NW+++  W+TDA L  W+GV+VND GRVVKL LR NNL+G IP  LG L  L  L L  NKL G
Sbjct:   11 TDRAALVALFNATGGANWKKNTKWNTDAPLGQWYGVEVNDAGRVVKLSLRYNNLKGHIPRQLGDLGALMTLNLGVNKLEG 90          
BLAST of mRNA_Ecto-sp13_S_contig11746.1502.1 vs. uniprot
Match: D8LL09_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL09_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 5.030e-24
Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 0
Query:    1 MAQTDRDALVALYRATGGENWRESLNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQLRLS 77
            M QTDRDALVALY A GG NW+ + NW+ DADL  WHG+++NDQGRVV++ L  NNL+G IP  LG L+ L++L LS
Sbjct:   51 MPQTDRDALVALYDAAGGFNWKNNGNWNADADLSKWHGININDQGRVVEVHLAANNLQGSIPEALGALSKLERLWLS 127          
BLAST of mRNA_Ecto-sp13_S_contig11746.1502.1 vs. uniprot
Match: A0A6H5K8T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T5_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 9.770e-24
Identity = 49/81 (60.49%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    4 TDRDALVALYRATGGENWRESLNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQLRLSWNKLSGE 84
            TDRDALVALY AT G NW+   NW+TD  L  W GV+ NDQGRVV L L DN L G IP+ LG L+ LQ+L L  N+L GE
Sbjct:  111 TDRDALVALYDATDGANWKSKQNWNTDLPLGRWRGVEANDQGRVVGLDLPDNKLHGHIPSDLGHLSALQKLNLLSNQLIGE 191          
BLAST of mRNA_Ecto-sp13_S_contig11746.1502.1 vs. uniprot
Match: D8LF65_ECTSI (Hypothetical leucine-rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF65_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 3.220e-23
Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    1 MAQTDRDALVALYRATGGENWRESLNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQLRLS 77
            M+  DR AL+AL+R+T G NW+ + NWDTDA+L TW GV+VND+GRVV+L L DNNL G IP  LG L  L  L +S
Sbjct:    1 MSTMDRAALIALFRSTDGANWKTNSNWDTDAELATWAGVEVNDEGRVVQLILPDNNLHGPIPEALGTLNELTHLSMS 77          
BLAST of mRNA_Ecto-sp13_S_contig11746.1502.1 vs. uniprot
Match: A0A6H5KQP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQP2_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.230e-22
Identity = 46/74 (62.16%), Postives = 56/74 (75.68%), Query Frame = 0
Query:    1 MAQTDRDALVALYRATGGENWRESLNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQL 74
            M  TDR+ALV+L+R+TGG  W    NWDTDADL TW+GV+VN QGRVV L L+ NNL+G IP  LG+LA L+ L
Sbjct:    1 MVSTDREALVSLFRSTGGAGWIRRDNWDTDADLATWNGVNVNVQGRVVNLDLQYNNLQGSIPPELGKLAALRAL 74          
BLAST of mRNA_Ecto-sp13_S_contig11746.1502.1 vs. uniprot
Match: D8LFJ9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ9_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 2.040e-22
Identity = 47/74 (63.51%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    1 MAQTDRDALVALYRATGGENWRESLNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQL 74
            MAQTDR+ALVALY A GG  WR + NW+T A L  WHGV+VN QGRVV L L DNNL+G IP  LG L  L  L
Sbjct:   25 MAQTDREALVALYTAIGGAKWRNNRNWNTSAALSQWHGVEVNSQGRVVNLFLWDNNLQGRIPTELGNLHMLDTL 98          
BLAST of mRNA_Ecto-sp13_S_contig11746.1502.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 2.090e-22
Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 0
Query:    1 MAQTDRDALVALYRATGGENWRESLNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQL 74
            MA TDR+ALVAL+R+TGG  WR+  NWDTDA + TWHGV+VN QGRVV L L  N+L G IP  LG L+ LQ+L
Sbjct:    1 MASTDREALVALFRSTGGAGWRQRGNWDTDAAIATWHGVEVNAQGRVVNLSLGGNSLRGHIPPELGALSELQEL 74          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11746.1502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBY3_ECTSI6.070e-4591.23Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JK91_9PHAE2.510e-4498.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3C2_9PHAE6.910e-2883.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3D6_9PHAE1.140e-2561.25Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LL09_ECTSI5.030e-2461.04Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5K8T5_9PHAE9.770e-2460.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF65_ECTSI3.220e-2358.44Hypothetical leucine-rich repeat protein n=1 Tax=E... [more]
A0A6H5KQP2_9PHAE1.230e-2262.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFJ9_ECTSI2.040e-2263.51Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FX56_ECTSI2.090e-2263.51LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..160
e-value: 5.7E-45
score: 155.6
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 98..158
e-value: 4.7E-8
score: 32.7
NoneNo IPR availablePANTHERPTHR45974:SF42coord: 40..124
NoneNo IPR availablePANTHERPTHR45974FAMILY NOT NAMEDcoord: 40..124
NoneNo IPR availablePANTHERPTHR45974:SF42coord: 85..160
NoneNo IPR availablePANTHERPTHR45974FAMILY NOT NAMEDcoord: 85..160
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 26..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11746contigEcto-sp13_S_contig11746:242..5233 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11746.1502.1mRNA_Ecto-sp13_S_contig11746.1502.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11746 242..5233 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11746.1502.1 ID=prot_Ecto-sp13_S_contig11746.1502.1|Name=mRNA_Ecto-sp13_S_contig11746.1502.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=160bp
MAQTDRDALVALYRATGGENWRESLNWDTDADLKTWHGVDVNDQGRVVKL
KLRDNNLEGEIPATLGQLANLQQLRLSWNKLSGEWFQGCIPKELGDLSQL
QVLELYRNQLSGPIPEVLGALSNLLWLSLYSNELTDEIPATLGQLGNLEE
LNLSRNELSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt