prot_Ecto-sp13_S_contig1173.1490.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1173.1490.1
Unique Nameprot_Ecto-sp13_S_contig1173.1490.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length961
Homology
BLAST of mRNA_Ecto-sp13_S_contig1173.1490.1 vs. uniprot
Match: D7FH23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH23_ECTSI)

HSP 1 Score: 996 bits (2574), Expect = 0.000e+0
Identity = 770/968 (79.55%), Postives = 787/968 (81.30%), Query Frame = 0
Query:    1 MEARNVWVAWLALETLKAPLCGSFVLRQAPPPGRTKYEAAASPRCSAAAPRARCSCLRSLHDPLLRPLLRSPRASSFARAPLSGTADDDNIGGDGIGKPGDKPPAAASDFDSDETGGVGTATGRAAVSTDVATETRRLMSAPTIDIKLELQMRGVEHRDAFEKADLARRLAEARVFCRGNNPSPCPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TEGRGAASDGGSSSAYARDVARGTRMGKAALARELNGMGIAHSRLSDVSVLARQYAARRQEAREDARRFPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVA--GWGDAREERAASELPWSFDKXXXXXXXXXXXXXXXXXXXXXXXXXXXDAGFPLGXXXXXXVGDDGGSETGWSTRANAGSAATA-GDDGGDKERSRKAVLHARADRLSSRELMKALDGLGARYRIPAPRAELQQAFVSAVLAAEEDERSQADATAAASGTRGEKIIPVSPYDAPLEEGDGGLLGTQGFGTYHSALRWARQLNFDDVLDELRYRGVEHSPRADYSYLTRLLADEVLXXXXXXXXXGGPEAGADAYTAEVEAAMSMSAQEMIRDLRAGGEIADVTLSKEALAERLAEMKLRLRGEPLAHSGSSAAYSYRGSPXXXXXXXXXXXXXXST--EARGPADPLGRRDGDEDVLLELEEAAKSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSASPSAAGRXXXXXXXXXXXXXGEQETERSRQVRAARERAGGVRRAATGYAQSSVNRAGFAVLQSLANGLLRGAEAAADWAGDGALAREFGRVAAQKLVLEGWKMERAKRXXXXXXXXXXXXXXXXXXXXXXXXXXTASRRGTSGYTAAPAGRRXXXXXXXXXXXXXXXXXXDARKKKGKERGSARSRRTKKPARKPLWEESDDDDRGCVVM 960
            MEARNVWVAWLALETLKAPLCGSFVL+QAPPPGRTKYE AA  RCSAA PRARCSC R LHDPLLRPLLRSPRASS A APLSGTADDD +G DG+GK GDKPPAA+S   S ETGGVGTATG AAV TDVATETRRLMS PTIDIKLELQMRGVEHRDAFEKADLARRLAEARV   GNNPSP PDXXXXXXXXXXXXXXX                                        TEGRGAA DGGS+ AYARDVARGTRMGKAALARELNGMGIAHSRLSD+SVLARQYAARRQEAREDARRFP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GWGDAR +RAAS LPW F K  XXXXXXX                  DA FPLG      VG+DG SETGWSTRANAGSAATA G  GGDKERSRKAVLHARADR+SSRELMKALDGLGARYRIPAPRAELQQAFVSAVLAAEEDERSQADATAAA+GTRG+ I+ VSPYD P+EEGDGGL GTQGFGTYHSALRWARQLNFDDVLDELRYRGVE SPRADYSYLTRLLADEVL         GGPE GADAYTAE+EAAMSMSAQEMIRDLRAGGEIADVTLSKEALAERLAEMKLRLRGEPL HSGSSA+       XXXXXXXXXXXXXX    EARGPADPLGR                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXX  QETERSRQVRAAR+RAGGVRRAATGYAQSSVNRAGFAVLQSLANGLLRGAEAAADWAGDGALAREFGR+AAQKLVLEGWKMERAKR XXXXXXXXXXXXXXX          T SRR TSGY AAPAGRRXXXXXXXXXXXXXXXXX  A KKKGKERGSAR  RTKKPARKPLWEESDDDDRGCVVM
Sbjct:    1 MEARNVWVAWLALETLKAPLCGSFVLQQAPPPGRTKYEPAAGSRCSAATPRARCSCSRGLHDPLLRPLLRSPRASSSAIAPLSGTADDDTLGRDGVGKAGDKPPAASSGS-SHETGGVGTATGEAAVGTDVATETRRLMSEPTIDIKLELQMRGVEHRDAFEKADLARRLAEARVSSCGNNPSPSPDXXXXXXXXXXXXXXXAGRDFGGAAADGPRENAHRSNKASTMMGNEPQAAAATAVATEGRGAAPDGGSNRAYARDVARGTRMGKAALARELNGMGIAHSRLSDLSVLARQYAARRQEAREDARRFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGWGDARGQRAASGLPWRFGKEEXXXXXXXEAAGVG------------DADFPLGGGGRDDVGEDGRSETGWSTRANAGSAATADGXGGGDKERSRKAVLHARADRMSSRELMKALDGLGARYRIPAPRAELQQAFVSAVLAAEEDERSQADATAAAAGTRGKNIVAVSPYDTPIEEGDGGLRGTQGFGTYHSALRWARQLNFDDVLDELRYRGVEQSPRADYSYLTRLLADEVLADEELMGGEGGPE-GADAYTAELEAAMSMSAQEMIRDLRAGGEIADVTLSKEALAERLAEMKLRLRGEPLPHSGSSASXXXXXXXXXXXXXXXXXXXXXXXXXEARGPADPLGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QETERSRQVRAARQRAGGVRRAATGYAQSSVNRAGFAVLQSLANGLLRGAEAAADWAGDGALAREFGRIAAQKLVLEGWKMERAKRRXXXXXXXXXXXXXXXAVDGDGA---TGSRRDTSGYAAAPAGRRXXXXXXXXXXXXXXXXXKGASKKKGKERGSAR--RTKKPARKPLWEESDDDDRGCVVM 948          
BLAST of mRNA_Ecto-sp13_S_contig1173.1490.1 vs. uniprot
Match: A0A6H5JDP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDP5_9PHAE)

HSP 1 Score: 915 bits (2365), Expect = 0.000e+0
Identity = 742/983 (75.48%), Postives = 752/983 (76.50%), Query Frame = 0
Query:   17 KAPLCGSFVLRQAPPPGRTKYEAAASPRCSAAAPRARCSCLRSLHDPLLRPLLRSPRASSFARAPLSGTADDDNIGGDGIGKPGDKPPAAASDFDSDETGGVGTATGRAAVSTDVATETRRLMSAPTIDIKLELQMRGVEHRDAFEKADLARRLAEARVFCRGNNPSPCPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGRGAASDGGSSSAYARDVARGTRMGKAALARELNGMGIAHSRLSDVSVLARQYAARRQEAREDARRFPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGWGDAREERAASELPWSFDKXXXXXXXXXXXXXXXXXXXXXXXXXXXDAGFPLGXXXXXXVGDDGGSETGWSTRANAGSAATAGDDGG----DKERSRKAVLHARADRLSSRELMKALDGLGARYRIPAPRAELQQAFVSAVLAAEEDERSQADATAAASGTRGEKIIPVSPYDAPLEEGDGGLLGTQGFGTYHSALRWARQLNFDDVLDELRYRGVEHSPRADYSYLTRLLADEVLXXXXXXXXXGGPEAGADAYTAEVEAAMSMSAQEMIRDLRAGGEIADVTLSKEALAERLAEMKLRLRGEPLAHSGSSAAYSYRGSPXXXXXXXXXXXXXX---STEARGPADPLGRRDGDEDVLLELEEAAKSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSASPSAAGRXXXXXXXXXXXXXGE-QETERSRQVRAARERAGGVRRAATGYAQSSVNRAGFAVLQSLANGLLRGAEAAADWAGDGALARE----------------------------FGRVAAQKLVLEGWKMERAKRXXXXXXXXXXXXXXXXXXXXXXXXXXTASRRGTSGYTAAPAGRRXXXXXXXXXXXXXXXXXXDARKKKGKERG---SARSRRTKKPARKPLWEESDDDDRGCVVM 960
            +APLCGSFVL+QAP PGRTKYEAAA PRCSAAAPRARCSCL  LHDPLLRPLLRSPRASS A APLSGTADDD IGGDG+GKPGDKPP A SDFDSDETGGVGTATGRAAVSTDVATETRRLMS PTIDIKLELQMRGVEHRDAFEKADLARRLAEARV C GNNPSP  DXXXXXXXXXXXXXXX                                     TEGRGAASDG SSSAYARDVARGTRMGKAALARELNGMGIAHSRLSDVSVLARQYAARRQEAREDARRFPP                                                  +S L  S   XXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXX        TGWSTRAN                D ERSRKA LHARADRLSSRELMKALD LGA+YRIPAPRAELQQAFVSAVLAAEEDERSQADATAAASG+RGE I+PVSPYDAPLEEGDGGL GTQGFGTYHSALRWARQLNFDDVLDEL+YRGVEHSPRADYSYLTRLLADEVL         GGPE GADAYTAE+EAAMSMSAQEMIRDLRAGGEIADVTLSKEALAERLAEMKLRLRGEPL HSGSS         XXXXXXXXXXXXXX   STE R PADPLGRRDGD DVLLELEEAAKSVG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXX   QETERSRQVRAARERAGGVRRAATGYAQSSVNRAGFAVLQSLANGLLRGAEAAADWAGDGALARE                            FGR+AAQKLVLEGWKMERAKRXXXXXXXXXXXXXXXXXXXXXXXX  TASRR TSGYTAAPAGR  XXXXXXXXXXXXXXXXX              SARSRRTKKPARKPLWEESDDDDRGCVVM
Sbjct:    8 QAPLCGSFVLQQAPSPGRTKYEAAAGPRCSAAAPRARCSCLWGLHDPLLRPLLRSPRASSSAIAPLSGTADDDTIGGDGVGKPGDKPPGADSDFDSDETGGVGTATGRAAVSTDVATETRRLMSVPTIDIKLELQMRGVEHRDAFEKADLARRLAEARVSCCGNNPSPSHDXXXXXXXXXXXXXXXLGGAAAHGPRESAHRSNKASTTTGNEPQAAAATAVP-TEGRGAASDGCSSSAYARDVARGTRMGKAALARELNGMGIAHSRLSDVSVLARQYAARRQEAREDARRFPP--------------------------------------------------SSALDGSISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------TGWSTRANXXXXXXXXXXXXXXXXDMERSRKAALHARADRLSSRELMKALDALGAQYRIPAPRAELQQAFVSAVLAAEEDERSQADATAAASGSRGENIVPVSPYDAPLEEGDGGLRGTQGFGTYHSALRWARQLNFDDVLDELKYRGVEHSPRADYSYLTRLLADEVLADEELMGGEGGPE-GADAYTAELEAAMSMSAQEMIRDLRAGGEIADVTLSKEALAERLAEMKLRLRGEPLPHSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXSTEGREPADPLGRRDGDGDVLLELEEAAKSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQETERSRQVRAARERAGGVRRAATGYAQSSVNRAGFAVLQSLANGLLRGAEAAADWAGDGALAREYVLLFIAAFCLVFKRGVGAAVALLVVIRFGRIAAQKLVLEGWKMERAKRXXXXXXXXXXXXXXXXXXXXXXXX--TASRRFTSGYTAAPAGRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARSRRTKKPARKPLWEESDDDDRGCVVM 929          
BLAST of mRNA_Ecto-sp13_S_contig1173.1490.1 vs. uniprot
Match: A0A836CCS4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCS4_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 8.520e-6
Identity = 28/38 (73.68%), Postives = 34/38 (89.47%), Query Frame = 0
Query:  138 LMSAPTIDIKLELQMRGVEHRDAFEKADLARRLAEARV 175
            +M+ PTIDIKLELQMRG++HRDA EK +LARRLA+AR 
Sbjct:   82 IMTMPTIDIKLELQMRGIDHRDALEKQELARRLAQARA 119          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1173.1490.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FH23_ECTSI0.000e+079.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDP5_9PHAE0.000e+075.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCS4_9STRA8.520e-673.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..960
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.479

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1173contigEcto-sp13_S_contig1173:1836..7164 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1173.1490.1mRNA_Ecto-sp13_S_contig1173.1490.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1173 1836..7164 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1173.1490.1 ID=prot_Ecto-sp13_S_contig1173.1490.1|Name=mRNA_Ecto-sp13_S_contig1173.1490.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=961bp
MEARNVWVAWLALETLKAPLCGSFVLRQAPPPGRTKYEAAASPRCSAAAP
RARCSCLRSLHDPLLRPLLRSPRASSFARAPLSGTADDDNIGGDGIGKPG
DKPPAAASDFDSDETGGVGTATGRAAVSTDVATETRRLMSAPTIDIKLEL
QMRGVEHRDAFEKADLARRLAEARVFCRGNNPSPCPDDDDDATTTITKAA
GRKIGGAAADGPRENAHRSNEASTTTGKKPQAAAATAVATEGRGAASDGG
SSSAYARDVARGTRMGKAALARELNGMGIAHSRLSDVSVLARQYAARRQE
AREDARRFPPSTARAGSSSSAEEDSEGGGEGRLEGKKGSGRRRGGGEEVA
GWGDAREERAASELPWSFDKKEEEDDDEEDEAGGGGGGGGGGGGGGGDAG
FPLGGGGRDDVGDDGGSETGWSTRANAGSAATAGDDGGDKERSRKAVLHA
RADRLSSRELMKALDGLGARYRIPAPRAELQQAFVSAVLAAEEDERSQAD
ATAAASGTRGEKIIPVSPYDAPLEEGDGGLLGTQGFGTYHSALRWARQLN
FDDVLDELRYRGVEHSPRADYSYLTRLLADEVLADEELMGEEGGPEAGAD
AYTAEVEAAMSMSAQEMIRDLRAGGEIADVTLSKEALAERLAEMKLRLRG
EPLAHSGSSAAYSYRGSPPPPQGRARGGGGGGSTEARGPADPLGRRDGDE
DVLLELEEAAKSVGGAALLVAREAAAFVSETAAGFFPPPPADDNDGGRSA
SPSAAGRGGRGGGGGGGGGDGEQETERSRQVRAARERAGGVRRAATGYAQ
SSVNRAGFAVLQSLANGLLRGAEAAADWAGDGALAREFGRVAAQKLVLEG
WKMERAKRRRATEDGGSGGGGGSSTAAGVGGGGATASRRGTSGYTAAPAG
RRRRRPRPEKETETRRPRPKDARKKKGKERGSARSRRTKKPARKPLWEES
DDDDRGCVVM*
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