prot_Ecto-sp13_S_contig1.14.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1.14.1
Unique Nameprot_Ecto-sp13_S_contig1.14.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length238
Homology
BLAST of mRNA_Ecto-sp13_S_contig1.14.1 vs. uniprot
Match: D7G1Z0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z0_ECTSI)

HSP 1 Score: 425 bits (1093), Expect = 3.490e-138
Identity = 212/237 (89.45%), Postives = 220/237 (92.83%), Query Frame = 0
Query:    1 MAWAPGNFLVLSSKTAVGKVYNISQSHTPIGSVKLGETGSGVRDLAWLPAQPEANLGGSASAGPRAICGFLDGSLSVADTAFGGRRAWGKKPGGRSGAAAGRGSSSGRRWGSGGGSGPIPWASKAGHVETVFSCDYRPGDPDTLATGSYGSSVKVWHVPTMDLKVTLNGPTGAIYCVAWSLDGKRIASTSGKGAVWIWNVGSRKVERQIRLHASAAHRVQWDPFQPGRLASVSADKT 237
            MAWAPGNFLVLSSKTAVGKVYNISQSHTPIG+VKLGETGSGVRD+AWLPAQPEANLGGSASAGPRAICGFLDGSLSVADTAFGGRRAWGK+PGGRSGAA  RGS           SG IPWASKAGHVETVFSC++RPGDPDTLATGSYGSSVKVWHVPTM+LK TL+G TGAIYCVAWSLDGKRIASTSGKGAVWIW+VGSRKVERQIRLH SAAHRVQWDPFQPGRLASVSADKT
Sbjct:    1 MAWAPGNFLVLSSKTAVGKVYNISQSHTPIGTVKLGETGSGVRDMAWLPAQPEANLGGSASAGPRAICGFLDGSLSVADTAFGGRRAWGKQPGGRSGAAGSRGSXXXXXXXXXXXSGSIPWASKAGHVETVFSCEHRPGDPDTLATGSYGSSVKVWHVPTMNLKATLSGQTGAIYCVAWSLDGKRIASTSGKGAVWIWDVGSRKVERQIRLHVSAAHRVQWDPFQPGRLASVSADKT 237          
BLAST of mRNA_Ecto-sp13_S_contig1.14.1 vs. uniprot
Match: A0A6H5L4N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4N2_9PHAE)

HSP 1 Score: 431 bits (1108), Expect = 1.740e-137
Identity = 217/238 (91.18%), Postives = 223/238 (93.70%), Query Frame = 0
Query:    1 MAWAPGNFLVLSSKTAVGKVYNISQSHTPIGSVKLGETGSGVRDLAWLPAQPEANLGGSASAGPRAICGFLDGSLSVADTAFGGRRAWGKKPGGRSGAAAGRGSSSGRRWGSGGG-SGPIPWASKAGHVETVFSCDYRPGDPDTLATGSYGSSVKVWHVPTMDLKVTLNGPTGAIYCVAWSLDGKRIASTSGKGAVWIWNVGSRKVERQIRLHASAAHRVQWDPFQPGRLASVSADKT 237
            MAWAPGNFLVLSSKTAVGKVYNISQSHTPIGSVKLGETGSGVRD+AWLPAQPEANLGGSASAGPRAICGFLDGSLSVADTAFGGRRAWGK+PGGRSGAAAGR              SGPIPWASKAGHVETVFSC++RPGDPDTLATGSYGSSVKVWHVPTMDLKVTL+GPTGAIYCVAWSLDGKRIASTSGKG VWIW+VGSRKVERQIRLHASAAHRVQWDPFQPGRLASVSADKT
Sbjct:    1 MAWAPGNFLVLSSKTAVGKVYNISQSHTPIGSVKLGETGSGVRDMAWLPAQPEANLGGSASAGPRAICGFLDGSLSVADTAFGGRRAWGKRPGGRSGAAAGRXXXXXXXXXXXXXXSGPIPWASKAGHVETVFSCEHRPGDPDTLATGSYGSSVKVWHVPTMDLKVTLSGPTGAIYCVAWSLDGKRIASTSGKGTVWIWDVGSRKVERQIRLHASAAHRVQWDPFQPGRLASVSADKT 238          
BLAST of mRNA_Ecto-sp13_S_contig1.14.1 vs. uniprot
Match: A0A5A8EIT1_CAFRO (ANAPC4_WD40 domain-containing protein n=6 Tax=Sar TaxID=2698737 RepID=A0A5A8EIT1_CAFRO)

HSP 1 Score: 117 bits (294), Expect = 1.580e-26
Identity = 57/112 (50.89%), Postives = 71/112 (63.39%), Query Frame = 0
Query:  126 GHVETVFSCDYRPGDPDTLATGSYGSSVKVWHVPTMDLKVTLNGPTGAIYCVAWSLDGKRIASTSGKGAVWIWNVGSRKVER-QIRLHASAAHRVQWDPFQPGRLASVSADK 236
            GH+ET+F   + P DPDTLAT SY +SVKVWH P+M    TL G TG +Y + WS DG RIA++SGKG V +W+V +  V   +   HAS + RV W    P  LASV  DK
Sbjct:  322 GHIETIFDAQFHPTDPDTLATASYDASVKVWHAPSMRCAQTLTGNTGPLYSLCWSPDGSRIAASSGKGRVVVWDVCTGAVIMLKDDAHASTSLRVSWSRTDPDLLASVGMDK 433          
BLAST of mRNA_Ecto-sp13_S_contig1.14.1 vs. uniprot
Match: A0A7S1G542_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G542_9STRA)

HSP 1 Score: 113 bits (282), Expect = 5.120e-26
Identity = 49/112 (43.75%), Postives = 69/112 (61.61%), Query Frame = 0
Query:  126 GHVETVFSCDYRPGDPDTLATGSYGSSVKVWHVPTMDLKVTLNGPTGAIYCVAWSLDGKRIASTSGKGAVWIWNVGSRKVERQIRLHASAAHRVQWDPFQPGRLASVSADKT 237
            GH ET+F   Y P D DTLAT SY S+VK+WH PTM+ ++TL G  G IY ++W+ D  R+ S S +  +++W+    K    ++ HA A +RV W+    G +AS SAD T
Sbjct:   18 GHTETIFDVRYCPSDKDTLATASYDSTVKIWHTPTMECRMTLTGQEGVIYGISWAPDDTRLVSASSRSELYVWDTKRGKKLTVMKHHADAIYRVDWNKLNKGLIASSSADGT 129          
BLAST of mRNA_Ecto-sp13_S_contig1.14.1 vs. uniprot
Match: A0A7S1G4J0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4J0_9STRA)

HSP 1 Score: 113 bits (282), Expect = 4.940e-25
Identity = 49/112 (43.75%), Postives = 69/112 (61.61%), Query Frame = 0
Query:  126 GHVETVFSCDYRPGDPDTLATGSYGSSVKVWHVPTMDLKVTLNGPTGAIYCVAWSLDGKRIASTSGKGAVWIWNVGSRKVERQIRLHASAAHRVQWDPFQPGRLASVSADKT 237
            GH ET+F   Y P D DTLAT SY S+VK+WH PTM+ ++TL G  G IY ++W+ D  R+ S S +  +++W+    K    ++ HA A +RV W+    G +AS SAD T
Sbjct:  317 GHTETIFDVRYCPSDKDTLATASYDSTVKIWHTPTMECRMTLTGQEGVIYGISWAPDDTRLVSASSRSELYVWDTKRGKKLTVMKHHADAIYRVDWNKLNKGLIASSSADGT 428          
BLAST of mRNA_Ecto-sp13_S_contig1.14.1 vs. uniprot
Match: A0A4Y2D5L7_ARAVE (WD repeat-containing protein 17 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2D5L7_ARAVE)

HSP 1 Score: 81.6 bits (200), Expect = 4.110e-14
Identity = 42/115 (36.52%), Postives = 66/115 (57.39%), Query Frame = 0
Query:  126 GHVETVFSCDYRPGDPDTLATGSYGSSVKVWHVPTMDLKVTLNGPTGAIYCVAWSL-DGKRIASTSGKGAVWIWNVGSRKVERQIRLHA--SAAHRVQWDPFQPGRLASVSADKT 237
            GH+ET+F C ++P DPD LAT S+  +VKVW+V TM+   +  G    IY ++W+  D   +A+ + K  ++IWN+    V R+I  HA  +  + V W+     ++AS   D T
Sbjct:  350 GHLETIFDCQFKPDDPDLLATASFDGTVKVWNVNTMEAVNSSQGDASIIYSLSWAPGDINCLAAATSKSGLFIWNLKKGSV-RKIADHAKDTYVYCVAWNQTDARKIASGGGDGT 463          
BLAST of mRNA_Ecto-sp13_S_contig1.14.1 vs. uniprot
Match: A0A226NET9_CALSU (ANAPC4_WD40 domain-containing protein n=1 Tax=Callipepla squamata TaxID=9009 RepID=A0A226NET9_CALSU)

HSP 1 Score: 77.0 bits (188), Expect = 1.650e-12
Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 0
Query:  126 GHVETVFSCDYRPGDPDTLATGSYGSSVKVWHVPTMDLKVTLNGPTGAIYCVAWSL-DGKRIASTSGKGAVWIWNVGSRKVERQIRLHA-SAAHRVQWDPFQPGRLASVSAD 235
            GHVET+F C+++P +PD LAT S+  ++KVW + T+    T  G  G IY ++W+  D   IA  + +   +IW+V   K+  +   H  +    + W      R+A+ S D
Sbjct:  274 GHVETIFDCEFKPDNPDLLATASFDGTIKVWDINTLTAVYTSPGNEGVIYSISWAPGDLNCIAGATSRNGGFIWDVPRGKIITRFSEHGKNGIFCIAWSHKDSKRIATCSDD 385          
BLAST of mRNA_Ecto-sp13_S_contig1.14.1 vs. uniprot
Match: UPI001C71E1C5 (WD repeat-containing protein 17 n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C71E1C5)

HSP 1 Score: 76.6 bits (187), Expect = 2.280e-12
Identity = 35/113 (30.97%), Postives = 64/113 (56.64%), Query Frame = 0
Query:  126 GHVETVFSCDYRPGDPDTLATGSYGSSVKVWHVPTMDLKVTLNGPTGAIYCVAWSL-DGKRIASTSGKGAVWIWNVGSRKVERQIRLHASAAHR--VQWDPFQPGRLASVSAD 235
            GH+ET+F C ++P +PD LAT S+  ++KVW+V TM+   + +G    IY ++W+  D   + + + K  ++IWN+    +++ I+ H    +   V W+     ++AS   D
Sbjct:  351 GHLETIFDCQFKPDNPDLLATASFDGTIKVWNVNTMEAINSSHGDASIIYSLSWAPGDTNCLVAATSKSGIFIWNLKKGSIQK-IQNHEKNTYIYCVAWNQKDSRKIASAGGD 462          
BLAST of mRNA_Ecto-sp13_S_contig1.14.1 vs. uniprot
Match: A0A803YDM1_MELGA (Uncharacterized protein n=26 Tax=Galliformes TaxID=8976 RepID=A0A803YDM1_MELGA)

HSP 1 Score: 76.6 bits (187), Expect = 2.300e-12
Identity = 36/112 (32.14%), Postives = 60/112 (53.57%), Query Frame = 0
Query:  126 GHVETVFSCDYRPGDPDTLATGSYGSSVKVWHVPTMDLKVTLNGPTGAIYCVAWSL-DGKRIASTSGKGAVWIWNVGSRKVERQIRLHA-SAAHRVQWDPFQPGRLASVSAD 235
            GH+ET+F C+++P +PD LAT S+  ++KVW + T+    T  G  G IY ++W+  D   IA  + +   +IW+V   K+  +   H  +    + W      R+A+ S D
Sbjct:  392 GHIETIFDCEFKPDNPDLLATASFDGTIKVWDINTLTAVYTSPGNEGVIYSISWAPGDLNCIAGATSRNGGFIWDVPRGKIITRFSEHGRNGIFCIAWSHKDSKRIATCSDD 503          
BLAST of mRNA_Ecto-sp13_S_contig1.14.1 vs. uniprot
Match: G1N5C0_MELGA (Uncharacterized protein n=3 Tax=Meleagris gallopavo TaxID=9103 RepID=G1N5C0_MELGA)

HSP 1 Score: 76.6 bits (187), Expect = 2.300e-12
Identity = 36/112 (32.14%), Postives = 60/112 (53.57%), Query Frame = 0
Query:  126 GHVETVFSCDYRPGDPDTLATGSYGSSVKVWHVPTMDLKVTLNGPTGAIYCVAWSL-DGKRIASTSGKGAVWIWNVGSRKVERQIRLHA-SAAHRVQWDPFQPGRLASVSAD 235
            GH+ET+F C+++P +PD LAT S+  ++KVW + T+    T  G  G IY ++W+  D   IA  + +   +IW+V   K+  +   H  +    + W      R+A+ S D
Sbjct:  392 GHIETIFDCEFKPDNPDLLATASFDGTIKVWDINTLTAVYTSPGNEGVIYSISWAPGDLNCIAGATSRNGGFIWDVPRGKIITRFSEHGRNGIFCIAWSHKDSKRIATCSDD 503          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1Z0_ECTSI3.490e-13889.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4N2_9PHAE1.740e-13791.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5A8EIT1_CAFRO1.580e-2650.89ANAPC4_WD40 domain-containing protein n=6 Tax=Sar ... [more]
A0A7S1G542_9STRA5.120e-2643.75Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S1G4J0_9STRA4.940e-2543.75Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A4Y2D5L7_ARAVE4.110e-1436.52WD repeat-containing protein 17 n=1 Tax=Araneus ve... [more]
A0A226NET9_CALSU1.650e-1233.04ANAPC4_WD40 domain-containing protein n=1 Tax=Call... [more]
UPI001C71E1C52.280e-1230.97WD repeat-containing protein 17 n=1 Tax=Parasteato... [more]
A0A803YDM1_MELGA2.300e-1232.14Uncharacterized protein n=26 Tax=Galliformes TaxID... [more]
G1N5C0_MELGA2.300e-1232.14Uncharacterized protein n=3 Tax=Meleagris gallopav... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 202..237
e-value: 42.0
score: 6.7
coord: 160..199
e-value: 1.2E-6
score: 38.1
coord: 117..157
e-value: 0.023
score: 23.9
coord: 26..79
e-value: 88.0
score: 4.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 167..199
e-value: 0.011
score: 16.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 124..166
score: 9.138
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 167..208
score: 10.442
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..237
e-value: 4.0E-30
score: 106.8
NoneNo IPR availablePANTHERPTHR44464FAMILY NOT NAMEDcoord: 121..237
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 124..237
score: 19.406
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 6..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1contigEcto-sp13_S_contig1:93270..95526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1.14.1mRNA_Ecto-sp13_S_contig1.14.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1 93270..95526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1.14.1 ID=prot_Ecto-sp13_S_contig1.14.1|Name=mRNA_Ecto-sp13_S_contig1.14.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=238bp
MAWAPGNFLVLSSKTAVGKVYNISQSHTPIGSVKLGETGSGVRDLAWLPA
QPEANLGGSASAGPRAICGFLDGSLSVADTAFGGRRAWGKKPGGRSGAAA
GRGSSSGRRWGSGGGSGPIPWASKAGHVETVFSCDYRPGDPDTLATGSYG
SSVKVWHVPTMDLKVTLNGPTGAIYCVAWSLDGKRIASTSGKGAVWIWNV
GSRKVERQIRLHASAAHRVQWDPFQPGRLASVSADKT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf