mRNA_Ecto-sp13_S_contig1157.1367.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1157.1367.1 vs. uniprot
Match: A0A6H5JZ79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ79_9PHAE) HSP 1 Score: 971 bits (2510), Expect = 0.000e+0 Identity = 499/535 (93.27%), Postives = 506/535 (94.58%), Query Frame = 1
Query: 310 MLVSLVMGAARGFLFNPTAGSGELRRAAGRGGYSSSSCAAGRIAMSPLTVRETRPHGGVCRMTAEAEEEAGGGEVEGEAEVVVPEAAAEPPAEKEDSSSTPDMPELLTPTREELESAFXXXXQAPYPTLPDPREMTSKQIEAAALQDVNYGGLPAARRANIDFERSERERIHFETATRVMNYEIQAERAEVMLSKNKKLTPAEARRLRRAALKNNYYGLIEVTEEDEGVMADYTWDQEPELITFSAYGVLYNWHLPMGLLMREALGRSHNYIHRMPPPGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKTINEFYMDEDIVLDKIDDLVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEVALETAGVKHAKKGLHVGCKYDTDITGSCETGMEAVSVKRFQTLYERPNEPYEFHRVYEIGELLNRLGLPQADEEYMSRRRGNFWXXXXXXXXXDFLDEFYGADDGLDEYEY 1914
MLVSLV+GAARGFLFNPTAG GEL+RAAGRGGYSSSSCAAGRIAMSPL VRETRPHGGVCRMTAEA VVVPEAAA+P AE EDSSSTP+MPELLTPTREELESAF QAPYPTLPDPREMTSKQIEAAALQDVNYGGLPAARRANIDFERSERERIHFETATRVMNYEIQAERAEVMLSKNKKLTPAEARRLRRA LKNNYYGLIEVTEEDEGV ADYTWDQEPELITFSAYGVLYNWHLPMGLLMREALGRSHNY+HRMPPPGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKTINEFYMDEDIVLDKIDDLVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYE+ALETAGVK AKKGLHVGCKY+TDITGSCE GMEAVSVKR QTLYERPNEPYEFHRVYEIGELLNRLGLPQADEEYMSRRRGNFWXXXXXXXX DFLDEFYGADDGLDEY Y
Sbjct: 1 MLVSLVVGAARGFLFNPTAGGGELKRAAGRGGYSSSSCAAGRIAMSPLAVRETRPHGGVCRMTAEAXXXXXXXXXXXXXXVVVPEAAADPSAENEDSSSTPEMPELLTPTREELESAFPDIPQAPYPTLPDPREMTSKQIEAAALQDVNYGGLPAARRANIDFERSERERIHFETATRVMNYEIQAERAEVMLSKNKKLTPAEARRLRRADLKNNYYGLIEVTEEDEGVRADYTWDQEPELITFSAYGVLYNWHLPMGLLMREALGRSHNYVHRMPPPGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKTINEFYMDEDIVLDKIDDLVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEIALETAGVKQAKKGLHVGCKYETDITGSCEAGMEAVSVKRCQTLYERPNEPYEFHRVYEIGELLNRLGLPQADEEYMSRRRGNFWXXXXXXXXEDFLDEFYGADDGLDEYAY 535
BLAST of mRNA_Ecto-sp13_S_contig1157.1367.1 vs. uniprot
Match: D8LIY6_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY6_ECTSI) HSP 1 Score: 781 bits (2016), Expect = 4.160e-279 Identity = 390/402 (97.01%), Postives = 397/402 (98.76%), Query Frame = 1
Query: 712 MTSKQIEAAALQDVNYGGLPAARRANIDFERSERERIHFETATRVMNYEIQAERAEVMLSKNKKLTPAEARRLRRAALKNNYYGLIEVTEEDEGVMADYTWDQEPELITFSAYGVLYNWHLPMGLLMREALGRSHNYIHRMPPPGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKTINEFYMDEDIVLDKIDDLVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEVALETAGVKHAKKGLHVGCKYDTDITGSCETGMEAVSVKRFQTLYERPNEPYEFHRVYEIGELLNRLGLPQADEEYMSRRRGNFWXXXXXXXXXDFLDEFYGADDGLDEYEYA 1917
MTSKQIEAAALQDVNYGGLPAARRANIDFERSERERIHFETATRVMNYEIQAERAEVMLS+NKKLTPAEARRLRRAALKNNYYGLIEVTEEDEGVMADYTWDQEPEL+TFSAYGVLYNWHLPMGLLMREALGRSHNYIHRMPPPGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKTINEFYMDEDIVLDKID+LVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYE+ALETAGVK AKKGLHVGCKY+TDITGSCETGMEAVSVKRFQTLYERPN+PYEFH VYE ELLNRLGLPQADEEYMSRRRGNFWXXXXXXXX DFLDEFYGAD+GLDEYEYA
Sbjct: 1 MTSKQIEAAALQDVNYGGLPAARRANIDFERSERERIHFETATRVMNYEIQAERAEVMLSENKKLTPAEARRLRRAALKNNYYGLIEVTEEDEGVMADYTWDQEPELVTFSAYGVLYNWHLPMGLLMREALGRSHNYIHRMPPPGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKTINEFYMDEDIVLDKIDELVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEIALETAGVKRAKKGLHVGCKYETDITGSCETGMEAVSVKRFQTLYERPNDPYEFHPVYENRELLNRLGLPQADEEYMSRRRGNFWXXXXXXXXEDFLDEFYGADEGLDEYEYA 402
BLAST of mRNA_Ecto-sp13_S_contig1157.1367.1 vs. uniprot
Match: W7TTJ7_9STRA (Haloacid dehalogenase-like hydrolase domain containing 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTJ7_9STRA) HSP 1 Score: 140 bits (352), Expect = 2.300e-32 Identity = 86/249 (34.54%), Postives = 135/249 (54.22%), Query Frame = 1
Query: 1024 PELITFSAYGVLYNWHLPMGLLMREALGRSHNYIHRMPPPGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKT-INEFYMDEDIVLDKIDDLVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEVALETAGVKHAKKGLHVGCKYDTDITGSCETGMEAVSVKRFQTLYERPNEPYEFHRVYEIGEL 1767
PELIT +A+G+L +GL RE + ++Y R+P P F F ++++ P +GA MS+ +WW +F +L + +DE V + +ELYYE A+E + V ++D+L WR +GGPKL V+ D D+RL +LENL +L YFD V++SRE+G + + +A+E AGVK KK +H+G +D D+ G+ GM+++ V Y P + +IG+L
Sbjct: 114 PELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPIFYKTFLDVGFPKEDLDEVFV-----GVFEELYYESLTSEWAWETVDDVLPMMDKLQEWR-MQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWVVMPSYDYLEPEQEARQVEFTKIGDL 356
BLAST of mRNA_Ecto-sp13_S_contig1157.1367.1 vs. uniprot
Match: A0A7S2STH1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STH1_9STRA) HSP 1 Score: 135 bits (341), Expect = 5.860e-31 Identity = 89/277 (32.13%), Postives = 144/277 (51.99%), Query Frame = 1
Query: 1024 PELITFSAYGVLYNWHLPMGLLMREALGRSHNYIHRMPPPGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKTINEFYMDEDIVLDKIDDLVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDN--EGGPK-LAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEVALETAGVKHAKKGLHVGCKYDTDITGSCETGMEAVSVK----RFQTLYERPNEPYEFHRVYEIGELLNRLGLPQADEEY-MSRRRGNF 1830
P ++TF A G L P+G+ REAL ++ R+P P F FKE ++ + PC+G M S DWW+ V D YLKT + E I+ + ++ D LY + G E +E+ VLD L +++ E P L V+++ D+RLH +L+NLG+ YFD VLTS+E E + ++++AL G+ + +H+G +D D+ G+ G A+ V+ R + + + P + EF RV ++ +L+ L + M+ RG F
Sbjct: 101 PRVVTFDATGTLMQLTEPVGMHYREALLQASGL--RLPSPDHFDAAFKEVYKAQSEEFPCFGCGAAMPSRDWWYPVVRDTYLKTG----VPEKILDPLLPEIFDSLYDNVFAGSEGWELNEQAIYVLDTLIELKESRAEDDPLYLGVISNFDERLHKLLDNLGIAHYFDIVLTSKECCVEKPNSPIFDMALSRLGIYDRSRAVHIGDTFDKDVAGAARAGWNAIFVRAPPYRMKNVDDLPCD-IEFQRVGDLSHVLDIFNLADFERPVIMTSARGIF 370
BLAST of mRNA_Ecto-sp13_S_contig1157.1367.1 vs. uniprot
Match: A0A7S2PCP1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCP1_9STRA) HSP 1 Score: 125 bits (315), Expect = 2.000e-27 Identity = 79/226 (34.96%), Postives = 118/226 (52.21%), Query Frame = 1
Query: 1024 PELITFSAYGVLYNWHLPMGLLMREALGRSHNYIHRMPPPGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKTINEFYMDEDIVLDKID----DLVDE-LYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEVALETAGVKHAKKGLHVGCKYDTDITGSCETGMEAV 1686
P+LITF A L +G+ R L + + R+P P F F ++ + PC+G M+S +WW Y + Y E + D++D D V E LY ++ EA+E+ P V L R WR+ EGGP+LAV+++ D+RLH +L+ +G+ FDFVLTSRE G E + +EVA+ AGV +HVG +D+D+ G+ G +V
Sbjct: 89 PQLITFDATDTLIQLKSEVGMTYRLILHEATRFRSRLPTPAVFTSAFNQAFTETNEKYPCFGCGLGMTSREWWAECTKRTYALVEHIDY--ERGLRDRMDGPLGDAVAEVLYNQVFASTEAWELKPGVLDALSRFKMWRE-EGGPQLAVLSNFDERLHSILDQVGVADAFDFVLTSREIGSEKPNRSAFEVAMSRAGVADPSLCMHVGDGFDSDVVGASNAGWHSV 311
BLAST of mRNA_Ecto-sp13_S_contig1157.1367.1 vs. uniprot
Match: D8LIY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY7_ECTSI) HSP 1 Score: 106 bits (264), Expect = 1.480e-23 Identity = 60/79 (75.95%), Postives = 62/79 (78.48%), Query Frame = 3
Query: 174 TCTPTNTTQDRSLSLPGRYDPLSRSRTASFLQRQGCTVDVSMADGDAGLVGDGSGARLLVQPHRR*-RRA*ESSGQGRL 407
T TP + S GRYDPLSRSRTASFLQRQGCTVDVSMA GDA LVG GSGARLLVQPHRR RRA ESSG+GRL
Sbjct: 35 TRTPRRGSTSGSTGYKGRYDPLSRSRTASFLQRQGCTVDVSMAAGDARLVGRGSGARLLVQPHRRWWRRAEESSGKGRL 113
BLAST of mRNA_Ecto-sp13_S_contig1157.1367.1 vs. uniprot
Match: L8GZ50_ACACA (HAD hydrolase, REG2-like, family IA subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZ50_ACACA) HSP 1 Score: 80.9 bits (198), Expect = 3.890e-13 Identity = 75/270 (27.78%), Postives = 126/270 (46.67%), Query Frame = 1
Query: 1024 PELITFSAYGVLYNWHLPMGLLMREALGRSHNY--IHRMPPPGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKTINEFYMDEDIVLDKIDDLVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEVALETAGVKHAKKGLHVGCKYDTDITGSCETGME-AVSVKRFQTLYERPNEPYEFHRVYEIGELLNRLGLPQADEEYMSRRRG 1824
P+L++ A G L+ +G EA R+ +H + P + F + H P +G +SS++WW +F E E+ D L D+++++ T EA+EV P + V+ L R N G K+AVV++ D+RL ++L+NLGL FD VL S G + +++ AL A V+ + +HVG Y D G+ + G+ A + R E+ + ++ + +LL LGL +S+ +G
Sbjct: 5 PKLVSLDATGTLFRVRGSVG----EAYARAAEAFGVHGLRPASLTRGFFAAWRDHNVRH-PNFGHGTELSSYNWWSSLFGATLAHARPELSHSEEFAADVFPKLFDQVWHDFT-RAEAWEVFPETEPVIKTL---RSN--GIKVAVVSNFDERLPLLLKNLGLDHLFDVVLPSCYAGVAKPDPDIFYQALRKANVE-GSEAVHVGDDYKKDYRGAKDAGLSRAFLMCRDAVALEKAAQVPPADILHNLSDLLPALGLQGPTLAQLSQCQG 262
BLAST of mRNA_Ecto-sp13_S_contig1157.1367.1 vs. uniprot
Match: A0A2P6N2V2_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N2V2_9EUKA) HSP 1 Score: 79.3 bits (194), Expect = 1.630e-12 Identity = 58/192 (30.21%), Postives = 93/192 (48.44%), Query Frame = 1
Query: 1141 PGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKTINEFYMDEDIVLDKIDDLVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEVALETAGVKHAKKGLHVGCKYDTDITGSCETGMEAVSVKRFQTLYE 1716
P + F +++ A P +G+ N+ S WW V + Y +E+ L K+ D LY + + E +++ P K VL + D+ G ++ + D+R+H VLE+LG+ FDFVL SRE G + ++Y A + H + +HVG Y+ D G+ GMEA+ V R Q + E
Sbjct: 68 PDELRDSFYRAYKQADAKWPNFGSENNVESKQWWKEVVYNTYRGADYLTSKEEEETLSKMSD---SLYSQFS-SVEGYKLFPETKAVLADVRERVDSIG-----LITNTDERIHQVLESLGIHHLFDFVLCSREFGKRKPDPSIYTEACRLSK-HHPSQVMHVGDHYEKDFLGAKGIGMEALLVTRGQDMEE 249
BLAST of mRNA_Ecto-sp13_S_contig1157.1367.1 vs. uniprot
Match: A0A068RE34_9FUNG (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RE34_9FUNG) HSP 1 Score: 79.7 bits (195), Expect = 3.450e-12 Identity = 68/240 (28.33%), Postives = 101/240 (42.08%), Query Frame = 1
Query: 1027 ELITFSAYGVLYNWHLPMGLLMREALGRSHNYIHRMPPPGA------FQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKT-INEFYMDEDIVLDKIDDLVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEVALETA---GVKHAKKGLHVGCKYDTDITGSCETGMEAVSVKRFQTLYE 1716
+L+TF AY L+ P G + YIH G K F +++D H P YG E M+ WW + D ++ + + +D L L + LY T + P V L L + G V+++ D+RL VL NLG+ PYFDFVL S GYE + +++ AL + LHVG + D G+ G A+ ++R + YE
Sbjct: 8 KLVTFDAYNTLFK---PRGSTTAQ-------YIHEASQLGIHVCRDRLTKVFGRAYKDQMIHHPFYGFQEGMNPRKWWEELVYDTFISAGVPKKELDPKFNL-----LFNSLYERFT-SDRGYSTFPDVHDTLVYL-----KKQGISTGVISNSDERLSEVLHNLGIRPYFDFVLPSYRAGYEKPKKEIFDQALRIMHPYNPTRPDQALHVGDDLNADYKGALNAGWNALLLERGKLSYE 226
BLAST of mRNA_Ecto-sp13_S_contig1157.1367.1 vs. uniprot
Match: A0A812QRQ7_SYMMI (Hdhd3 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812QRQ7_SYMMI) HSP 1 Score: 77.4 bits (189), Expect = 1.000e-11 Identity = 46/120 (38.33%), Postives = 63/120 (52.50%), Query Frame = 1
Query: 1333 DELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEVALETAGVKHAKKGLHVGCKYDTDITGSCETGMEAVSV 1692
D+LY + G EA+E++P L+ L W L V+++ DDRL V+L+NLG+L FDFVLTS E E ++ ALE AG+ LH G Y D+ G+ AV V
Sbjct: 144 DDLYGHVFCGQEAWELLPRTVRSLESLREWC-AANDCVLGVMSNMDDRLSVILQNLGILDKFDFVLTSYEARAEKPSAIIFTKALEVAGLAPTSHALHCGDSYKRDLIGATSVNWMAVLV 262 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1157.1367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1157.1367.1 >prot_Ecto-sp13_S_contig1157.1367.1 ID=prot_Ecto-sp13_S_contig1157.1367.1|Name=mRNA_Ecto-sp13_S_contig1157.1367.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=598bp MVLSGVAKAVPRPTTKHARPQTPHRTGPCRYQGDMTPSRGAGPLASYSGRback to top mRNA from alignment at Ecto-sp13_S_contig1157:1224..10048+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1157.1367.1 ID=mRNA_Ecto-sp13_S_contig1157.1367.1|Name=mRNA_Ecto-sp13_S_contig1157.1367.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8825bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1157:1224..10048+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1157:1224..10048+ >mRNA_Ecto-sp13_S_contig1157.1367.1 ID=mRNA_Ecto-sp13_S_contig1157.1367.1|Name=mRNA_Ecto-sp13_S_contig1157.1367.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1794bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1157:1224..10048+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |