mRNA_Ecto-sp13_S_contig11565.1362.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11565.1362.1 vs. uniprot
Match: A0A6H5JEW3_9PHAE (S-formylglutathione hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEW3_9PHAE) HSP 1 Score: 214 bits (544), Expect = 6.100e-62 Identity = 113/141 (80.14%), Postives = 122/141 (86.52%), Query Frame = 1
Query: 4 NMKRSSSPLRGADSIMASSSSGAATDLEIKSETACFGGRLLKCVHQSKATKTPMTFTVFLPPSAASSAVPVLYYLSGLTCTDDNFIQKAGAQRIAALRGVALVAPDTSPRGAGVAGEVCSTPVGVGPAFRRAVAIARRSVY 426
N+KR PLRGADSIMAS S GAA DLEIKSETACFGGRLLKCVHQSKATKTPMTFTVFLPP+AASSAVPVLYYLSGLTCTDDNFIQKAGAQRIAALRGVALVAPDTSPRGAGVAGE ++ G+G + R +++ Y
Sbjct: 46 NIKRXXXPLRGADSIMASXSGGAAADLEIKSETACFGGRLLKCVHQSKATKTPMTFTVFLPPAAASSAVPVLYYLSGLTCTDDNFIQKAGAQRIAALRGVALVAPDTSPRGAGVAGEAGTSAQGLGSTWTRRKRTGKKTRY 186
BLAST of mRNA_Ecto-sp13_S_contig11565.1362.1 vs. uniprot
Match: A0A7S2UZ85_9STRA (S-formylglutathione hydrolase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ85_9STRA) HSP 1 Score: 130 bits (327), Expect = 4.520e-31 Identity = 64/103 (62.14%), Postives = 75/103 (72.82%), Query Frame = 1
Query: 82 LEIKSETACFGGRLLKCVHQSKATKTPMTFTVFLPPSAASSAVPVLYYLSGLTCTDDNFIQKAGAQRIAALRGVALVAPDTSPRGAGVAGEVCSTPVGVGPAF 390
LE+K E CFGG L + HQS+A TPM F++FLPP A SS VPVLYYLSGLTCTD+NF QK GA R+A+ G+A+VAPDTSPRGAG+ GE G G F
Sbjct: 5 LEVKKEWKCFGGTLKQLTHQSEAVGTPMRFSIFLPPQAESSPVPVLYYLSGLTCTDENFTQKGGAYRLASKLGIAVVAPDTSPRGAGIEGEDSGWDFGTGAGF 107
BLAST of mRNA_Ecto-sp13_S_contig11565.1362.1 vs. uniprot
Match: A0A7S1SFB8_ALECA (S-formylglutathione hydrolase (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SFB8_ALECA) HSP 1 Score: 120 bits (300), Expect = 4.780e-28 Identity = 67/108 (62.04%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 73 ATDLEIKSETACFGGRLLKCVHQSKATKTPMTFTVFLPPSAASSA--VPVLYYLSGLTCTDDNFIQKAGAQRIAALRGVALVAPDTSPRGAGVAGEVCSTPVGVGPAF 390
A LE K E GGR+ K H S+AT TPMTF+VFLPP A + VPVLYYLSGLTCTDDN IQKA AQR AA G+ VAPDTSPRGAG+ GE S G G F
Sbjct: 20 AAGLEKKGENRMCGGRVQKWAHASEATGTPMTFSVFLPPQVAQAGTKVPVLYYLSGLTCTDDNVIQKACAQRAAAAHGMVFVAPDTSPRGAGIEGEDDSYDFGSGAGF 127
BLAST of mRNA_Ecto-sp13_S_contig11565.1362.1 vs. uniprot
Match: UPI0013E827B6 (S-formylglutathione hydrolase-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0013E827B6) HSP 1 Score: 119 bits (299), Expect = 4.260e-27 Identity = 65/105 (61.90%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 76 TDLEIKSETACFGGRLLKCVHQSKATKTPMTFTVFLPPSAASSAVPVLYYLSGLTCTDDNFIQKAGAQRIAALRGVALVAPDTSPRGAGVAGEVCSTPVGVGPAF 390
T++E+ S FGG L+ HQS PMTFTV+LPPS AS+ VPVLY+LSGLTCTD+NFI KAGAQR AA G+ALVAPDTSPRG + GE S GVG F
Sbjct: 8 TEVELLSTNKMFGGHNLRYRHQSATLGCPMTFTVYLPPSPASN-VPVLYWLSGLTCTDENFIIKAGAQRAAAAHGIALVAPDTSPRGLNIEGESDSYDFGVGAGF 111
BLAST of mRNA_Ecto-sp13_S_contig11565.1362.1 vs. uniprot
Match: A0A6V1VPS3_HETAK (S-formylglutathione hydrolase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VPS3_HETAK) HSP 1 Score: 119 bits (299), Expect = 5.040e-27 Identity = 62/103 (60.19%), Postives = 71/103 (68.93%), Query Frame = 1
Query: 82 LEIKSETACFGGRLLKCVHQSKATKTPMTFTVFLPPSAASSAVPVLYYLSGLTCTDDNFIQKAGAQRIAALRGVALVAPDTSPRGAGVAGEVCSTPVGVGPAF 390
LE+KS C GG + + HQS +T TPM FT+FLPP + S VPVLYYLSGLTCTD+N +QK GA R AA G+ALV PDTSPRGAGV GE G G F
Sbjct: 11 LELKSSWKCHGGFVRQYSHQSSSTGTPMRFTIFLPPESCGSDVPVLYYLSGLTCTDENVVQKGGAFRAAARAGLALVCPDTSPRGAGVEGEDEGWDFGTGAGF 113
BLAST of mRNA_Ecto-sp13_S_contig11565.1362.1 vs. uniprot
Match: A0A7S4V882_9DINO (S-formylglutathione hydrolase (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4V882_9DINO) HSP 1 Score: 120 bits (300), Expect = 5.490e-27 Identity = 66/110 (60.00%), Postives = 76/110 (69.09%), Query Frame = 1
Query: 67 GAATDLEIKSETACFGGRLLKCVHQSKATKTPMTFTVFLPPSA--ASSAVPVLYYLSGLTCTDDNFIQKAGAQRIAALRGVALVAPDTSPRGAGVAGEVCSTPVGVGPAF 390
G A+ LE K E FGG++ K H S++T TPMTF+VFLPP A + VPVLYYLSGLTCTDDN QKA AQR AA G+ +VAPDTSPRGAG+ GE S G G F
Sbjct: 27 GFASGLEKKGENRMFGGQVQKWTHASESTGTPMTFSVFLPPQVTQAGTKVPVLYYLSGLTCTDDNVTQKACAQRAAAAHGMVIVAPDTSPRGAGIEGEDESYDFGSGAGF 136
BLAST of mRNA_Ecto-sp13_S_contig11565.1362.1 vs. uniprot
Match: A0A7S2STF8_9STRA (S-formylglutathione hydrolase (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STF8_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.290e-26 Identity = 66/122 (54.10%), Postives = 80/122 (65.57%), Query Frame = 1
Query: 25 PLRGADSIMASSSSGAATDLEIKSETACFGGRLLKCVHQSKATKTPMTFTVFLPPSAASSAVPVLYYLSGLTCTDDNFIQKAGAQRIAALRGVALVAPDTSPRGAGVAGEVCSTPVGVGPAF 390
P R A +S+S GAA + FGG + H+S AT TPMTF+VFLPP AA+ VP ++YLSGLTCTD+NF+QKAGA R AA +A+VAPDTSPRGAGV GE + G G F
Sbjct: 22 PWRSALRSCSSTSGGAAAPPRVVGSHKSFGGVWTRYEHESAATGTPMTFSVFLPPRAAAGPVPCVFYLSGLTCTDENFVQKAGAARAAAALQLAIVAPDTSPRGAGVQGEEDAYDFGTGAGF 143
BLAST of mRNA_Ecto-sp13_S_contig11565.1362.1 vs. uniprot
Match: B7F3S0_ORYSJ (S-formylglutathione hydrolase n=5 Tax=Oryza TaxID=4527 RepID=B7F3S0_ORYSJ) HSP 1 Score: 113 bits (282), Expect = 1.630e-26 Identity = 63/110 (57.27%), Postives = 74/110 (67.27%), Query Frame = 1
Query: 82 LEIKSETACFGGRLLKCVHQSKATKTPMTFTVFLPPSAASSAVPVLYYLSGLTCTDDNFIQKAGAQRIAALRGVALVAPDTSPRGAGVAGEVCSTPVGVGPAFRRAVAIA 411
LE S T FGG L+ H S PMTF+VFLPPS AS +PVLY+LSGLTC D+NF+ KAGAQR AA G+ALVAPDTSPRG + GE S GVG + + V I+
Sbjct: 14 LEQMSRTKMFGGHNLRFRHHSATLGCPMTFSVFLPPSPASD-LPVLYWLSGLTCNDENFVTKAGAQRAAAAHGIALVAPDTSPRGLNIEGEADSWDFGVGLSTLKTVNIS 122
BLAST of mRNA_Ecto-sp13_S_contig11565.1362.1 vs. uniprot
Match: UPI001AA08FDA (S-formylglutathione hydrolase n=1 Tax=Aestuariicella hydrocarbonica TaxID=1470433 RepID=UPI001AA08FDA) HSP 1 Score: 117 bits (294), Expect = 1.720e-26 Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 1
Query: 82 LEIKSETACFGGRLLKCVHQSKATKTPMTFTVFLPPSAASSAVPVLYYLSGLTCTDDNFIQKAGAQRIAALRGVALVAPDTSPRGAGVAGE 354
+EI +E CFGGR L+ H+S A M ++F+PP A +S VPVLY+LSGLTCTD+NF+QKAGAQRIAA GVA+VAPDTSPRG GVA +
Sbjct: 1 MEIVAENKCFGGRQLQFTHESSALNCTMRCSIFVPPQADTSKVPVLYWLSGLTCTDENFVQKAGAQRIAAELGVAIVAPDTSPRGEGVADD 91
BLAST of mRNA_Ecto-sp13_S_contig11565.1362.1 vs. uniprot
Match: F0Y275_AURAN (S-formylglutathione hydrolase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y275_AURAN) HSP 1 Score: 117 bits (293), Expect = 2.950e-26 Identity = 61/97 (62.89%), Postives = 71/97 (73.20%), Query Frame = 1
Query: 103 ACFGGRLLKCVHQSKATKTPMTFTVFLPPSAASSA-VPVLYYLSGLTCTDDNFIQKAGAQRIAALRGVALVAPDTSPRGAGVAGEVCSTPVGVGPAF 390
ACFGG + H S+ TKTPM F+VF+PP+A A P ++YLSGLTCTD+NF+QKAGA R AA RGVALVAPDTSPRGAGV GE + G G F
Sbjct: 11 ACFGGSWQRYKHDSECTKTPMAFSVFVPPAATPEAPAPCIFYLSGLTCTDENFVQKAGAARAAAERGVALVAPDTSPRGAGVDGEDDAYDFGSGAGF 107 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11565.1362.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11565.1362.1 >prot_Ecto-sp13_S_contig11565.1362.1 ID=prot_Ecto-sp13_S_contig11565.1362.1|Name=mRNA_Ecto-sp13_S_contig11565.1362.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=190bp MKRSSSPLRGADSIMASSSSGAATDLEIKSETACFGGRLLKCVHQSKATKback to top mRNA from alignment at Ecto-sp13_S_contig11565:360..2523+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11565.1362.1 ID=mRNA_Ecto-sp13_S_contig11565.1362.1|Name=mRNA_Ecto-sp13_S_contig11565.1362.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2164bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11565:360..2523+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11565:360..2523+ >mRNA_Ecto-sp13_S_contig11565.1362.1 ID=mRNA_Ecto-sp13_S_contig11565.1362.1|Name=mRNA_Ecto-sp13_S_contig11565.1362.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=570bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11565:360..2523+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |