mRNA_Ecto-sp13_S_contig11564.1361.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11564.1361.1
Unique NamemRNA_Ecto-sp13_S_contig11564.1361.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11564.1361.1 vs. uniprot
Match: D7FUH9_ECTSI (Importin subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUH9_ECTSI)

HSP 1 Score: 454 bits (1167), Expect = 2.180e-154
Identity = 270/312 (86.54%), Postives = 272/312 (87.18%), Query Frame = 1
Query:   55 MSSQTSSSSMQKRRDIKAGVDPTDLRRRRADTALSLRKQKKESGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDAAQKPVSAADVPDLTRALAAGAGGLAARVEAARGLRKVLSLETDPPVAEVIQAGAMPLLVLCLDEHSSTDLQFEAAWALTNIASTCKTDAVVQHGAVLPLVRNLRHHXXXXXXXXXXXXXXXXXXXAGLRDVVLGTPDALEGLLLNVVQPATPSLLRNCVWALSNMCRGKPQPDMALLAPALPVLLKLLSSDDSEVLVDTCWALSYLSDGTTERIETVISSGVARPLTALLQ 990
            MSSQTSSSSMQKRRDIKAGVDPTDLRRRRADTALSLRKQKKESGL                                 +DAAQKPVSAADVPDLTRALAAGAGG AARVEAARGLRKVLSLETDPPVAEVIQAGAMPLLVLCLDEHSSTDLQFEAAWALTNIASTCKTDAVVQHGAV  LVRNLRHH  XXXXXXXXXXXXXXXXXA LRDVVLGTPDALEGLLLNVVQPATPSLLRNCVWALSNMCRGKPQPDM+LLAPALPVLL LLSSDDSEVLVDTCWALSYLSDGTTERIETVISSGVARPLTALLQ
Sbjct:    1 MSSQTSSSSMQKRRDIKAGVDPTDLRRRRADTALSLRKQKKESGL---------------------------------EDAAQKPVSAADVPDLTRALAAGAGGPAARVEAARGLRKVLSLETDPPVAEVIQAGAMPLLVLCLDEHSSTDLQFEAAWALTNIASTCKTDAVVQHGAVPALVRNLRHHNQXXXXXXXXXXXXXXXXXAELRDVVLGTPDALEGLLLNVVQPATPSLLRNCVWALSNMCRGKPQPDMSLLAPALPVLLNLLSSDDSEVLVDTCWALSYLSDGTTERIETVISSGVARPLTALLQ 279          
BLAST of mRNA_Ecto-sp13_S_contig11564.1361.1 vs. uniprot
Match: F0Y3B0_AURAN (IBB domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3B0_AURAN)

HSP 1 Score: 223 bits (568), Expect = 5.070e-65
Identity = 138/316 (43.67%), Postives = 172/316 (54.43%), Query Frame = 1
Query:  130 RRRRADTALSLRKQKKESGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDAAQKPVSAADVPDLTRALAAGAGGLAARVEAARGLRKVLSLETDPPVAEVIQAGAMPLLVLCLDEHSSTDLQFEAAWALTNIASTCKTDAVVQHGAVLPLVRNLRHHXXXXXXXXXXXXXXXXXXXAGLRDVVLGT---PDALEGLLLNVVQPATPSLLRNCVWALSNMCRGKPQPDMALLAPALPVLLKLLSSDDSEVLVDTCWALSYLSDGTTERIETVISSGVARPLTALLQHGDSNVVTPALRTLGNFVTGSDVQTQ 1068
            RRRR DT L +RK K+E GLA                                  AA +  + AD+P L   + +    +   V A RG RK+LS+E  PPV  V+  G + +L   L  H+  +LQFEAAWALTN+AST KT AVV  G V  +V+ ++                        RD VL       ALE L+ N+  PAT SLLRN  W+LSN+CRG P+PD+A LAPA+PVL+ LL SDD + L+D CWALSYLSDG   RI+ V+  G A  L+ LL H    VVTPALRTLGN VTG+D QTQ
Sbjct:    3 RRRREDTTLQIRKNKREEGLAKRRAFQRDVAPVLAPKPDAG------------NPAAPERPTVADMPRLLNEIQSQDPAVV--VAATRGWRKLLSVEPQPPVDAVLATGVVAVLARLLAHHAMPELQFEAAWALTNVASTDKTQAVVDAGVVPAMVQLMQSPNGDVREQCIWCLGNIAGDSTESRDAVLAAGRAAGALEPLIANLQNPATTSLLRNATWSLSNLCRGTPKPDVARLAPAIPVLVGLLRSDDVDTLMDACWALSYLSDGDEARIQCVVDHGAAAALSPLLGHASHKVVTPALRTLGNVVTGNDAQTQ 304          
BLAST of mRNA_Ecto-sp13_S_contig11564.1361.1 vs. uniprot
Match: A0A835YTP4_9STRA (Importin subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTP4_9STRA)

HSP 1 Score: 219 bits (558), Expect = 2.570e-63
Identity = 131/316 (41.46%), Postives = 171/316 (54.11%), Query Frame = 1
Query:   88 KRRDIKAGVDPTDLRRRRADTALSLRKQKKESGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDAAQKPVSAADVPDLTRALAAGAGGLAARVEAARGLRKVLSLETDPPVAEVIQAGAMPLLVLCLDEHSSTDLQFEAAWALTNIASTCKTDAVVQHGAVLPLVRNLRHHXXXXXXXXXXXXXXXXXXXAGLRDVVLGTPDALEGLLLNVVQPATPSLLRNCVWALSNMCRGKPQPDMALLAPALPVLLKLLSSDDSEVLVDTCWALSYLSDGTTERIETVISSGVARPLTALLQHGDSNVVTPALRTLG 1035
            +++D K GV   D RRRR +  +S+RK K+E GL                                +   + +  +A D+  L   L+     +  +++  RG+RK+LS E +PPV  V+ AG +P++V  L    ST+L FEAAWA+TNIAST  T  V  HGA+ PL R L H                      LRD+VL   DA+ GLLLN+ Q A+PSL+RNCVWALSN CRGKP P   L A A PV + +LSS D E  VD  WALSYLSDG  +RIE V+ +G   PL A+L    + VVTPALR +G
Sbjct:    9 RKQDYKRGVSCEDARRRRTEHQVSIRKNKREEGLQKRRNLEVIE----------------------EPGPSDETAAAPDLQTLKAGLSHA--DVNVQIQCMRGIRKMLSKEGNPPVKLVMSAGLLPIIVATLSREDSTELMFEAAWAVTNIASTDYTAEVAAHGAIAPLSRLLMHKSADLREQCAWCLGNIAGDSPALRDLVLDGGDAVRGLLLNITQAASPSLMRNCVWALSNFCRGKPHPRAELAAAAAPVAVSVLSSSDDEARVDAGWALSYLSDGDNDRIEVVVDAGALPPLMAMLDSKAAAVVTPALRAVG 300          
BLAST of mRNA_Ecto-sp13_S_contig11564.1361.1 vs. uniprot
Match: A0A7S2BTP8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BTP8_9STRA)

HSP 1 Score: 212 bits (540), Expect = 9.890e-62
Identity = 131/313 (41.85%), Postives = 166/313 (53.04%), Query Frame = 1
Query:  103 KAGVDPTDLRRRRADTALSLRKQKKESGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDAAQKPVSAADVPDLTRALAAGAGGLAARVEAARGLRKVLSLETDPPVAEVIQAGAMPLLVLCLDEHSSTDLQFEAAWALTNIASTCKTDAVVQHGAVLPLVRNLRHHXXXXXXXXXXXXXXXXXXXAGLRDVVLGTPDALEGLLLNVVQPATPSLLRNCVWALSNMCRGKPQPDMALLAPALPVLLKLLSSDDSEVLVDTCWALSYLSDGTTERIETVISSGVARPLTALLQHGDSNVVTPALRTLGNF 1041
            K  V   D RRRR D ++S+RK K+E GLA                                        + AD+P L   + +    +  R++A +G RKVLSL  +PPV EVI  G +P+L+  L    S +LQFEAAWALTNIAST  T  V            L                      A LRD V+ +  A++ LL NV+QPA+ S+LRN +WALSN+CRGKPQP M  +APA+PVL   L+S+D+E+LVD CWALSYLSDG  ER+E V+ S V   L  LL H    VVTPALRT+GN 
Sbjct:   20 KKTVGHEDGRRRREDISISIRKNKREEGLAKRRQTSEEAVPLQNTMSA-------------SSGMRSHAFTVADIPTLWANIQSSDPQI--RLDATKGFRKVLSLVKNPPVREVIDTGVLPILIQLLQSVDSPELQFEAAWALTNIASTDMTRIVXXXXXXXXXXXXLLSQSPDVREQCAWCLSNIAGDCAELRDFVIQS-GAMQPLLQNVIQPASNSMLRNTIWALSNLCRGKPQPKMETVAPAIPVLAATLNSEDTEILVDCCWALSYLSDGDNERVEAVVQSNVVPRLVQLLSHASPTVVTPALRTIGNI 316          
BLAST of mRNA_Ecto-sp13_S_contig11564.1361.1 vs. uniprot
Match: A0A5D6XW47_9STRA (Importin subunit alpha n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW47_9STRA)

HSP 1 Score: 207 bits (527), Expect = 6.960e-59
Identity = 138/341 (40.47%), Postives = 188/341 (55.13%), Query Frame = 1
Query:   55 MSSQTSSSSMQKRRDIKAGVDPTDLRRRRADTALSLRKQKKESGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDAAQKPVSAADVPDLTRALAAGAGGLAARVEAARGLRKVLSLETDPPVAEVIQAGAMPLLVLCLDEHSSTDLQFEAAWALTNIAS--TCKTDAVVQHGAVLPLVRNLRHHXXXXXXXXXXXXXXXXXXXAGLRDVVLGTPDALEGLLLNVVQPATPSLLRNCVWALSNMCRGKPQPDMALLAPALPVLLKLLSSDDSEVLVDTCWALSYLSDGTTERIETVISSGVARPLTALLQHGDSNVVTPALRTLGNFVTGSDVQTQV 1071
            MSS ++S + +++ + K  +D  ++RRRR++T + +RK  KE  L                                 Q       + + VP++             +++A    RK+LS+E +PP+ EVI+ G +PL V  L       LQFEAAWALTNIAS  +  T+ V+QH AV   V+ L  +         XXXXXXXX     RD+VL    AL  L+  +   A P++LRN  W LSN CRGKPQP   L+APALP L +L+ + D EVL D CWALSYLSDG+ E+I++VI +GV R +  LL H    V TPALRT+GN VTG+D+QTQV
Sbjct:    1 MSSFSASKAPERKSNFKKTIDADEIRRRRSETTVQIRKNIKEDRLNQRRRMGAEVPIDESAAMGGDMAGDLTLAQRLAQLPQMVQGAQSSVPEV-------------QLDAVTKFRKLLSIERNPPIKEVIETGVVPLFVTFLQREDFPTLQFEAAWALTNIASGTSADTEVVIQHNAVPIFVQLLLSNNDDVREQAVXXXXXXXXDSIECRDMVLHC-GALRPLMQQLATNAKPTMLRNATWTLSNFCRGKPQPQFDLVAPALPTLGQLIFTQDEEVLTDACWALSYLSDGSNEKIQSVIEAGVCRRIVELLMHPSPAVQTPALRTVGNIVTGNDLQTQV 327          
BLAST of mRNA_Ecto-sp13_S_contig11564.1361.1 vs. uniprot
Match: A0A2R5GYA6_9STRA (Protein unc-45 homolog B n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GYA6_9STRA)

HSP 1 Score: 213 bits (541), Expect = 6.210e-58
Identity = 126/324 (38.89%), Postives = 176/324 (54.32%), Query Frame = 1
Query:  103 KAGVDPTDLRRRRADTALSLRKQKKESGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDAAQKPVSAADVPDLTRALAAGAGGLAARVEAARGLRKVLSLETDPPVAEVIQAGAMPLLVLCLDEHSSTDLQFEAAWALTNIASTCKTDAVVQHGAVLPLVRNLRHHXXXXXXXXXXXXXXXXXXXAGLRDVVLGTPDALEGLLLNVVQPATPSLLRNCVWALSNMCRG-KPQPDMALLAPALPVLLKLL-SSDDSEVLVDTCWALSYLSDGTTERIETVISSGVARPLTALLQHGDSNVVTPALRTLGNFVTGSDVQTQ 1068
            K+G+D  + R++R + ++ +RK ++E  L                                  DAA+ P   + +P + +A+  G+     R+   + LRK+LS  TDPPV EVI AG +P L   L  H  T LQFEAAWALTN+ S+  T+++V+ G +  LV  L                      + LRD VL TP   EGLL N+ QPA  S++RN  WA+SN+CRG KP+P + ++AP +PVL +++ SS D E  VD CWALSY+SDG  ER++ ++ +GV   L  LL+ G S  V P LRTLGN VTG D  TQ
Sbjct:  584 KSGIDQEECRKKRQEVSVQIRKSRREDNLRKRRQTANQEVTAPSTPAKEGANA--------SNDAAEIPAKLSALPQMLQAMQDGSAEQ--RIAGTKALRKLLSKPTDPPVQEVIDAGFLPYLCQFLQCHDDTALQFEAAWALTNVGSSDLTESIVEVGVLPLLVPLLNSAEPSVREQAAWCVGNVAGDCSSLRDQVLATPGLPEGLLANLQQPANVSMMRNVTWAVSNLCRGSKPRPALNMVAPYVPVLARIIESSGDEEATVDACWALSYVSDGENERLDAIVQTGVCPTLVKLLRSGMSKCVPPCLRTLGNIVTGEDKHTQ 897          
BLAST of mRNA_Ecto-sp13_S_contig11564.1361.1 vs. uniprot
Match: W7TTB3_9STRA (Importin subunit alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTB3_9STRA)

HSP 1 Score: 206 bits (523), Expect = 6.320e-58
Identity = 138/316 (43.67%), Postives = 169/316 (53.48%), Query Frame = 1
Query:  100 IKAGVDPTDLRRRRADTALSLRKQKKESGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDAAQKPVSAADVPDLTR-ALAAGAGGLAARVEAARGLRKVLSLETDPPVAEVIQAGAMPLLVLCLDEHSS-TDLQFEAAWALTNIASTCKTDAVVQHGAVLPLVRNLRHHXXXXXXXXXXXXXXXXXXXAGLRDVVLGTPDALEGLLLNVVQPATPSLLRNCVWALSNMCRGKPQPDMALLAPALPVLLKLL-SSDDSEVLVDTCWALSYLSDGTTERIETVISSGVARPLTALLQHGDSNVVTPALRTLGN 1038
             K   D    RRRR +  + +RKQK+E  L+                                   A   +    V DL R AL   +G +A  VEA RG+RK+LS+E  PPV EV+    +PLLV  LD   + T LQFEAAWALTNIAST  T A+V HGA+ PL R L                        LRD+VL    AL  LL NV+ PA+ S+LRNC+W+LSN+CRGKPQP + LL PALPVL ++L SS D E L DT WALSY+SDG   RI+ V+ + VA  L   L H   NVVTP +R LGN
Sbjct:    8 FKKVFDGDSCRRRREEQQVQIRKQKREDSLSQRRRMDNDSQSTVPAATNYPAAGSFGTSVGLAAGGAN--LGGPQVEDLPRFALDMRSGDVAREVEATRGVRKLLSVERKPPVEEVLAQNILPLLVGLLDRDGAPTQLQFEAAWALTNIASTSFTRALVVHGAIPPLTRLLLSPSADVREQCAWALGNVSGDCPELRDMVL-QHGALRPLLQNVLAPASESMLRNCIWSLSNLCRGKPQPHVDLLRPALPVLAQVLASSSDPECLQDTAWALSYISDGDGARIQAVLDADVASDLVKHLTHPLPNVVTPVVRALGN 320          
BLAST of mRNA_Ecto-sp13_S_contig11564.1361.1 vs. uniprot
Match: A0A2U1KS97_ARTAN (Importin alpha isoform 1 n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1KS97_ARTAN)

HSP 1 Score: 199 bits (507), Expect = 1.270e-57
Identity = 143/342 (41.81%), Postives = 176/342 (51.46%), Query Frame = 1
Query:   88 KRRDIKAGVDPTDLRRRRADTALSLRKQKKESGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDAAQKPVSAADVPDLT-------RALAAGAGGL-----AARVEAARGLRKVLSLETDPPVAEVIQAGAMPLLVLCLDEHSSTDLQFEAAWALTNIASTCK--TDAVVQHGAVLPLVRNLRHHXXXXXXXXXXXXXXXXXXXAGLRDVVLGTPDALEGLLLNVVQPATPSLLRNCVWALSNMCRGKPQPDMALLAPALPVLLKLLSSDDSEVLVDTCWALSYLSDGTTERIETVISSGVARPLTALLQHGDSNVVTPALRTLGNFVTGSDVQTQV 1071
            +R   K  VD  D RRRR D  + +RK K+E  L                                Q   A  P S   VP +T        +L +   G+     A ++EA    RK+LS+E  PP+ EVIQ+G +P  V  L       LQFEAAWALTNIAS     T  V+ HGAV   V+ L            XXXXXX       RD+VLG   AL  LL  + + A  S+LRN  W LSN CRGKPQP      PALP L +L+ S+D EVL D CWALSYLSDGT ++I+ VI +GV R L  LL H   +V+ PALRT+GN VTG D+QTQ+
Sbjct:   12 RRNRYKVAVDAEDGRRRREDNMVEIRKNKREENLLKKR----------------------------QVLPASVPSSTGGVPPVTSSVEKKLESLPSMVAGVYSNDNATQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVEFLMREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLASPSDDVREQAVXXXXXXAGDSPRCRDLVLGQ-GALLPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFEETRPALPALERLVHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCRRLVELLLHPSPSVLIPALRTVGNIVTGDDLQTQL 324          
BLAST of mRNA_Ecto-sp13_S_contig11564.1361.1 vs. uniprot
Match: A0A7S2UBR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBR3_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.380e-57
Identity = 120/298 (40.27%), Postives = 161/298 (54.03%), Query Frame = 1
Query:  100 IKAGVDPTDLRRRRADTALSLRKQKKESGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDAAQKPVSAADVPDLTRALAAGAGGLAARVEAARGLRKVLSLETDPPVAEVIQAGAMPLLVLCLDEHSSTDLQFEAAWALTNIASTCKTDAVVQHGAVLPLVRNLRHHXXXXXXXXXXXXXXXXXXXAGLRDVVLGTPDALEGLLLNVVQPATPSLLRNCVWALSNMCRGKPQPDMALLAPALPVLLKLLSSDDSEVLVDTCWALSYLSDGTTERIETVISSGVARPLTALLQH 993
             K G+D  + RR R DT + LRK KKE  LA                                  A ++  + AD+P L   +    G     +E+ RG R++LSLE +PPVA V+  GA+PL V  L+ +    +QFEAAWALTN+AST  T  VV+  A+  LV  LR                       LRD VL    A+E LLLN+  PATP++L+N VWALSN CRGKPQPD+ ++APA+P L ++L+S++ + +VD CWALSYL DG+ +RI+ V  SG    L +LL H
Sbjct:   12 FKKGIDAAECRRGREDTQIRLRKNKKEESLAKRRNFANVKGPAENAGVTVNQTGAT---------ATKRVFTEADIPMLLPGMQNLMGDKEVLLESVRGFRRMLSLEINPPVAAVMNCGALPLFVQMLNLNDHPTIQFEAAWALTNVASTEFTSKVVEANALPALVALLRSPDADVREQCAWCLGNIAGDSPPLRDTVLNC-GAMEPLLLNIENPATPAMLQNMVWALSNFCRGKPQPDLHVIAPAVPHLSRMLTSNNQDAIVDACWALSYLCDGSDDRIQLVQDSGATEHLVSLLSH 299          
BLAST of mRNA_Ecto-sp13_S_contig11564.1361.1 vs. uniprot
Match: A0A446NCA7_TRITD (IBB domain-containing protein n=6 Tax=Poaceae TaxID=4479 RepID=A0A446NCA7_TRITD)

HSP 1 Score: 199 bits (506), Expect = 3.590e-57
Identity = 141/334 (42.22%), Postives = 175/334 (52.40%), Query Frame = 1
Query:   88 KRRDIKAGVDPTDLRRRRADTALSLRKQKKESGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDAAQKPVSAADVPDLTRALAAGAGGLAA-----RVEAARGLRKVLSLETDPPVAEVIQAGAMPLLVLCLDEHSSTDLQFEAAWALTNIASTCK--TDAVVQHGAVLPLVRNLRHHXXXXXXXXXXXXXXXXXXXAGLRDVVLGTPDALEGLLLNVVQPATPSLLRNCVWALSNMCRGKPQPDMALLAPALPVLLKLLSSDDSEVLVDTCWALSYLSDGTTERIETVISSGVARPLTALLQHGDSNVVTPALRTLGNFVTGSDVQTQ 1068
            +R   K  VD  + RRRR D  + +RK ++E  L                                    AQ P+ AA V     +L A  GG+ +     ++EA    RK+LS+E  PP+ EVIQ+G +P  V  L       LQFEAAWALTNIAS     T  V+ HGAV   V+ L            XXXXXXXX     RD+VL    AL  LL  + + A  S+LRN  W LSN CRGKPQP      PALP L +L+ S+D EVL D CWALSYLSDGT ++I++VI +GV   L  LL H   +V+ PALRT+GN VTG D QTQ
Sbjct:   12 RRNRYKVTVDADEGRRRREDNMVEIRKNRREESLLKKRREGLQ---------------------------AQAPIPAAGVEKKLESLPAMVGGVYSEDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLASGSDDVREQAVXXXXXXXXDSPKCRDLVLAN-GALMPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPAFDQTKPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQSVIDAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDSQTQ 317          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11564.1361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUH9_ECTSI2.180e-15486.54Importin subunit alpha n=2 Tax=Ectocarpus TaxID=28... [more]
F0Y3B0_AURAN5.070e-6543.67IBB domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A835YTP4_9STRA2.570e-6341.46Importin subunit alpha n=1 Tax=Tribonema minus Tax... [more]
A0A7S2BTP8_9STRA9.890e-6241.85Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A5D6XW47_9STRA6.960e-5940.47Importin subunit alpha n=1 Tax=Pythium brassicum T... [more]
A0A2R5GYA6_9STRA6.210e-5838.89Protein unc-45 homolog B n=1 Tax=Hondaea fermental... [more]
W7TTB3_9STRA6.320e-5843.67Importin subunit alpha n=2 Tax=Monodopsidaceae Tax... [more]
A0A2U1KS97_ARTAN1.270e-5741.81Importin alpha isoform 1 n=1 Tax=Artemisia annua T... [more]
A0A7S2UBR3_9STRA1.380e-5740.27Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A446NCA7_TRITD3.590e-5742.22IBB domain-containing protein n=6 Tax=Poaceae TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11564contigEcto-sp13_S_contig11564:1830..4866 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score454.1
Seed ortholog evalue5.9e-125
Seed eggNOG ortholog2880.D7FUH9
Model size1078
KEGG koko:K15043
KEGG Pathwayko05164,map05164
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.nuclear import signal receptor activity
EggNOG OGsCOG5064@1,KOG0166@2759
Ec32 ortholog descriptionImportin subunit alpha
Ec32 orthologEc-21_003780.1
Cds size1077
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462607.2118351-CDS-Ecto-sp13_S_contig11564:1829..23391681462607.2118351-CDS-Ecto-sp13_S_contig11564:1829..2339Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11564 1830..2339 +
1681462607.222036-CDS-Ecto-sp13_S_contig11564:3095..32601681462607.222036-CDS-Ecto-sp13_S_contig11564:3095..3260Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11564 3096..3260 +
1681462607.2305174-CDS-Ecto-sp13_S_contig11564:3777..39811681462607.2305174-CDS-Ecto-sp13_S_contig11564:3777..3981Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11564 3778..3981 +
1681462607.239344-CDS-Ecto-sp13_S_contig11564:4668..48661681462607.239344-CDS-Ecto-sp13_S_contig11564:4668..4866Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11564 4669..4866 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11564.1361.1prot_Ecto-sp13_S_contig11564.1361.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11564 1830..4866 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11564.1361.1

>prot_Ecto-sp13_S_contig11564.1361.1 ID=prot_Ecto-sp13_S_contig11564.1361.1|Name=mRNA_Ecto-sp13_S_contig11564.1361.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=359bp
SHSQSSTIQPTLSEELAAMSSQTSSSSMQKRRDIKAGVDPTDLRRRRADT
ALSLRKQKKESGLAKRRNTMSSSSSAAAAAAGAANPHSAGGLAAAQQDAA
QKPVSAADVPDLTRALAAGAGGLAARVEAARGLRKVLSLETDPPVAEVIQ
AGAMPLLVLCLDEHSSTDLQFEAAWALTNIASTCKTDAVVQHGAVLPLVR
NLRHHNQDLREQCAWCLGNIAGDCAGLRDVVLGTPDALEGLLLNVVQPAT
PSLLRNCVWALSNMCRGKPQPDMALLAPALPVLLKLLSSDDSEVLVDTCW
ALSYLSDGTTERIETVISSGVARPLTALLQHGDSNVVTPALRTLGNFVTG
SDVQTQVD*
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mRNA from alignment at Ecto-sp13_S_contig11564:1830..4866+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11564.1361.1 ID=mRNA_Ecto-sp13_S_contig11564.1361.1|Name=mRNA_Ecto-sp13_S_contig11564.1361.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3037bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11564:1830..4866+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCACACTCTCAATCTTCCACCATCCAACCAACTCTTTCCGAAGAACTCGC AGCCATGTCTTCCCAGACCTCCTCTTCCTCCATGCAGAAGCGCCGCGACA TCAAGGCTGGCGTCGACCCGACCGATCTCCGGCGACGACGCGCCGATACT GCGCTCAGCCTCCGCAAGCAGAAGAAGGAATCTGGCCTGGCCAAGCGGCG AAACACCATGTCATCATCATCATCAGCCGCTGCTGCTGCTGCCGGCGCCG CCAACCCTCACTCCGCCGGCGGCCTGGCCGCCGCGCAGCAGGACGCGGCG CAGAAGCCGGTCTCCGCGGCGGACGTGCCCGACCTGACCAGGGCGCTGGC GGCGGGCGCAGGCGGCCTGGCCGCGAGGGTGGAGGCCGCGAGAGGCCTCC GGAAGGTGCTCTCCCTCGAGACCGACCCTCCCGTGGCGGAGGTGATCCAG GCCGGCGCGATGCCGCTGCTGGTGCTCTGCTTGGACGAGCACAGCAGTAC GGACTTGCAGGTGAGTCGTGTGGTTCTCTTGGATTTGCAGCACTGTTTAG CGCTATCTTGGTACTTCTGTACAAAGTCATGAACTTGTACATTTGTAGGT CTGTGTAAAAACGGATAGATGGATGCATGCAATTTCAGTACAAAGTAGGC CTTGTAGTTGGGTTGTCCGTTCGACCATTCGACCAAGCAAGTACACGGCA TGCTGTAGGCGTTCCCGTACCGCGCACACACAAAGCTCTTAGCATTTTGG ACGCGGGAGAATGGGAAGCTGTTGGTGAAATTGTGAATCCTCTAGGTGCA GCTATAGTATTCAGTGGCCGTCACGAGAGGGAGCGCTGCCATCAACATAG CATCGGTTGAAAAGCATGATTGTTGTGAAAAATACACTCGGTACGTGGCA GCAACCACCGCCACTACCTCCGAACCTCTCGCTGGACTTGGCATGTCGCC TGACAGTTAGCCTTCCCTCCCCAAACCACCCGTCAATGGGCATAGCTTGC CACCTGCACGCTCTGCATATGCTTGACTCTACTAGACTTTTTGTGTTGAG TGCTCTTCGTTCGTATTTTCGGTTGCGGAGCGTTCTCTTTCTTCTGTTCC CGCCATGCTGCGCATGCGTTGACCACATGGGGAGTTTCGAGGAGTTTCTT TGAGCACTTGCCCACAGCAGGATCATGTCCGACTAGTGTAGGACTTTCGT GTGTCATCATCCCCAACATTGTGTTGCGCGGCCACTGCTGCAATTATCCC TACCCGCCGGCCACAGTTTGAGGCGGCCTGGGCTCTAACGAACATCGCTT CCACCTGCAAGACGGACGCGGTCGTTCAGCACGGTGCTGTGCTCCCCCTC GTGCGCAACCTCCGGCACCACAACCAAGACCTCCGCGAGCAGTGCGCGTG GTGCCTCGGCAACATCGCCGGAGACTGCGCCGTGAGTATTAGTATTTTCG TTTCGATCGTTATAATTATTGAGTTCCGGGAGCCAAGTTTGGTGTTTGTT GGTCGCTTTTCGCTTCTAGCGATGTCGACATGTAGATTTCGGGAAACTCT GAACCGGTGCCCAACAGCAGTGTTTTTTTCGGGTCTACTTCCTTGGCTGT TTTTTTGTCTTGAAGAGCTGTCTGTTGCCCAAACGGTGCGGGTTTTCGGA AGACGCATACCGTTTTTTGCTATTTTTTTAAGCGCTTTCTTGTGTGCGGA TGTACGACGGTCTATGTAGATGTATATGTTCCACCTTGAGCTCCAGGTTG GTGTGGGGACTTTGTTTCCGCTTCTTGGAACATGGGCCCGTGTATCGCAC GGAATATACTTGATTTACACCCCTCTCGTCGAAACTAAGAGCGGGCAAGC TCGCTCAAGCTCGTGTGACCCACGCAACACTCAAAACAGCGTCAGTTCTG ACCTCAACTCCGAACGTACCCTCTATTTGTTGTCATGCCGGTCATCAGGG GCTCCGTGACGTGGTGCTGGGTACCCCCGACGCCCTCGAGGGGCTGCTGC TCAACGTCGTGCAGCCGGCCACGCCGTCGTTGCTGAGGAACTGCGTGTGG GCCTTGAGCAACATGTGCCGCGGGAAGCCACAGCCGGACATGGCCCTGCT CGCCCCGGCCTTGCCGGTGCTGCTGAAGCTGCTGTCGTCCGACGACTCAG AGGTACAGTCAACTGCTGTGACACTCGATATCATCTTCCCCCTGGGGGTC GATCTTCAAAAACTTGATTTCTCCACAGCGGAAATAACGGAGGCGCCGAG AACGGTGGTGTTTGACCGACTCTTCGAGAGCTTTCTGAATACATATCGTG TGATTCATGGATCTTTGTCGTCGTGGGGTAGTCGAGCCGTGAAGATCGGT CTGGGGGATGTGGTATCTTGTGTCAAGTGTCACGTTCGGGAGCCGACTCT ACGTGCTTAGAGGTGCTGGGCTATCGGAACGCCCATCCGAGTGTGTCCTA CCGCCAAAGAGTGGGAGGGAGGCATTCTAAGCACTGGTGCGAAGCATGCA CGTCCGGAACCCTTTGAAGTTTGCTCGTGTCAAAAACGGGTAGACGGCGA GGAGCTTTCGTGGGTCGGCCATTTGATGCGCACCTCCGAGTTACATGTCC GAAATTTAGAACGTCGTTTGGTTGCACCGATAAGAAGTTAACTTATCGCC CTATCTGCCAACTCCCTCTGTGCGAATAGCTGCGTCTTTCTCGCTGAAAC GATCAGACCAAAACTGGCAGGATTGATTTGGTCTCTTCCCCGTGTCATGC ACCCGCACTCCGTCTAGCTGATTGATTTGTTCTCCGCCTCTCCCTTTTAC TTAACATAACACAATTTCTTCGCTTTGCCCTTCTCGCAGGTATTGGTGGA CACCTGCTGGGCCTTGTCGTACCTCTCTGATGGCACCACCGAGCGCATTG AGACGGTCATCTCGTCCGGTGTTGCGCGACCCTTGACGGCGCTGCTCCAG CACGGGGACAGCAACGTGGTAACCCCGGCCCTGAGAACGCTCGGCAACTT CGTGACGGGCAGCGACGTGCAGACGCAGGTTGATTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11564:1830..4866+

>mRNA_Ecto-sp13_S_contig11564.1361.1 ID=mRNA_Ecto-sp13_S_contig11564.1361.1|Name=mRNA_Ecto-sp13_S_contig11564.1361.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1077bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11564:1830..4866+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCACACTCTCAATCTTCCACCATCCAACCAACTCTTTCCGAAGAACTCGC
AGCCATGTCTTCCCAGACCTCCTCTTCCTCCATGCAGAAGCGCCGCGACA
TCAAGGCTGGCGTCGACCCGACCGATCTCCGGCGACGACGCGCCGATACT
GCGCTCAGCCTCCGCAAGCAGAAGAAGGAATCTGGCCTGGCCAAGCGGCG
AAACACCATGTCATCATCATCATCAGCCGCTGCTGCTGCTGCCGGCGCCG
CCAACCCTCACTCCGCCGGCGGCCTGGCCGCCGCGCAGCAGGACGCGGCG
CAGAAGCCGGTCTCCGCGGCGGACGTGCCCGACCTGACCAGGGCGCTGGC
GGCGGGCGCAGGCGGCCTGGCCGCGAGGGTGGAGGCCGCGAGAGGCCTCC
GGAAGGTGCTCTCCCTCGAGACCGACCCTCCCGTGGCGGAGGTGATCCAG
GCCGGCGCGATGCCGCTGCTGGTGCTCTGCTTGGACGAGCACAGCAGTAC
GGACTTGCAGTTTGAGGCGGCCTGGGCTCTAACGAACATCGCTTCCACCT
GCAAGACGGACGCGGTCGTTCAGCACGGTGCTGTGCTCCCCCTCGTGCGC
AACCTCCGGCACCACAACCAAGACCTCCGCGAGCAGTGCGCGTGGTGCCT
CGGCAACATCGCCGGAGACTGCGCCGGGCTCCGTGACGTGGTGCTGGGTA
CCCCCGACGCCCTCGAGGGGCTGCTGCTCAACGTCGTGCAGCCGGCCACG
CCGTCGTTGCTGAGGAACTGCGTGTGGGCCTTGAGCAACATGTGCCGCGG
GAAGCCACAGCCGGACATGGCCCTGCTCGCCCCGGCCTTGCCGGTGCTGC
TGAAGCTGCTGTCGTCCGACGACTCAGAGGTATTGGTGGACACCTGCTGG
GCCTTGTCGTACCTCTCTGATGGCACCACCGAGCGCATTGAGACGGTCAT
CTCGTCCGGTGTTGCGCGACCCTTGACGGCGCTGCTCCAGCACGGGGACA
GCAACGTGGTAACCCCGGCCCTGAGAACGCTCGGCAACTTCGTGACGGGC
AGCGACGTGCAGACGCAGGTTGATTGA
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