prot_Ecto-sp13_S_contig11558.1356.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11558.1356.1 vs. uniprot
Match: A0A6H5LAW9_9PHAE (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAW9_9PHAE) HSP 1 Score: 201 bits (512), Expect = 6.300e-55 Identity = 250/301 (83.06%), Postives = 258/301 (85.71%), Query Frame = 0
Query: 1 FVNLVKALPIVLECWWFGDEDGLRGQAPLPRLNNDIDDVNGDGND----------NDNNVPPPLPPGRDDAPAAGAPRNEQDPPDDVLVEVVLDRVRDRALHAADAAYDAXXXXXXXXXXXXXXXXXXALSLPPDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ENAVPAGVGGNGAPQAGEHGVGVAVPPVGDGGEDRVLVVGGGGVAAGIHGA 289
FVNLVKALPIVLECWWFGDEDGLRGQAPLPRLNND D+VNG N+ NVPPPLPPGR+DAPAAG PRNEQ+P DD+LVEV+LDRVRDRALHAA AA+DAXXXXXXXXX AL LP DRA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +NAVPAGVGGNGAP AGEHGVGVAVPPVGDGGE RVLVVGGGGVAAGIHGA
Sbjct: 580 FVNLVKALPIVLECWWFGDEDGLRGQAPLPRLNNDNDNVNGXXXXXXXXXXXXXXNNINVPPPLPPGRNDAPAAGGPRNEQEPLDDILVEVMLDRVRDRALHAAAAAHDAXXXXXXXXXA--------ALPLPADRAAAVPPIGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNAVPAGVGGNGAPHAGEHGVGVAVPPVGDGGEGRVLVVGGGGVAAGIHGA 872
BLAST of mRNA_Ecto-sp13_S_contig11558.1356.1 vs. uniprot
Match: D7G9B1_ECTSI (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B1_ECTSI) HSP 1 Score: 120 bits (302), Expect = 6.030e-27 Identity = 156/288 (54.17%), Postives = 161/288 (55.90%), Query Frame = 0
Query: 1 FVNLVKALPIVLECWWFGDEDGLRGQAPLPRLNNDIDDVNGDGNDNDNNVPPPLPPGRDDAPAAGAPRNEQDPPDDVLVEVVLDRVRDRALHAADAAYDAXXXXXXXXXXXXXXXXXXALSLPPDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENAVPAGVGGNGAPQAGEHGVGVAVPPVGDGGEDRVLVVGGGGVAAGIHG 288
FVNLVKALP+VLE WW GDED LR AG PRNEQDPPDD+LVEV+LDRVRDRALHAA AA+D XXXXXXXXXXXXXXXXX L LP RA XXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +NAVPAGVGGNGAPQAGEHGVGVAVPPVGDGGE RVL VGG VAAGI G
Sbjct: 271 FVNLVKALPVVLERWWLGDEDELR--------------------------------------VAGGPRNEQDPPDDILVEVMLDRVRDRALHAAAAAHDXXXXXXXXXXXXXXXXXXATLPLPAGRAAAVPPIGEEGGEXXXXXXXXGEVEASGVPSVGGGGGDVGDYDGRAVAAAAEVPIPPERGVMDGEPPVVGRGTGGPVDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DNAVPAGVGGNGAPQAGEHGVGVAVPPVGDGGEGRVLAVGGXXVAAGIQG 519 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11558.1356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig11558.1356.1 ID=prot_Ecto-sp13_S_contig11558.1356.1|Name=mRNA_Ecto-sp13_S_contig11558.1356.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=290bpback to top |