prot_Ecto-sp13_S_contig11555.1354.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11555.1354.1
Unique Nameprot_Ecto-sp13_S_contig11555.1354.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length395
Homology
BLAST of mRNA_Ecto-sp13_S_contig11555.1354.1 vs. uniprot
Match: D7G3R3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3R3_ECTSI)

HSP 1 Score: 556 bits (1432), Expect = 6.820e-196
Identity = 292/358 (81.56%), Postives = 298/358 (83.24%), Query Frame = 0
Query:    1 MPKHNRAPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILADATVVLSSDKLEDLPCFDRASIGAAPSVNANRVWLPGQQVYLGILPLAEAVAQLAPLATTIPPLPNAENFHAALARGESIEHGAEGGDASPEFRAHLGKRVVAECVVRLTHSAGLLKKGECCVILPTADELEAFEPGLGGTSAGAQEEKEEERHLPFQGLERQAPSHGLDVDGMQRRFSSFTLGHPDGAAQRAGVAGGGAAQAMAAPARNSEREDIVPLSTQPKSESEPLCAMASADRDALITLFHETRGANWREKGNWGTSEGLGTWYGVDVNAEGRVVKLSLYNNNLEGFLPPELGKLGALEHL 358
            MPKHNRAPPA                                       ILA+ATVVLSSDKLEDLPCFDRASIGAAPSVNANRVWLPGQQVYLGILPLAEAVAQLAPLATTIPPLPNAENFHAALARGESIEHGA GGDASPEFRAHLGKRVVAECVVRL H AGLLKKGECCVILPTA ELEAFEPG  GTSAGAQEE   ERH PFQGLERQAPSHGL + GM RRFSSFTL HP+G A+RAG  GGGAAQA+AAPARNSE EDIV LSTQPKSESEPLCAMASADRDALITLFHETRGANWREKGNWGTSE LGTWYGVDVNAEGRVVKLSLYNNNL+G LPPELGKLGALEHL
Sbjct:    1 MPKHNRAPPASSPPATPPRTRHRQGQSSPAPNTEPSTQEPPASTLLPPPILANATVVLSSDKLEDLPCFDRASIGAAPSVNANRVWLPGQQVYLGILPLAEAVAQLAPLATTIPPLPNAENFHAALARGESIEHGAGGGDASPEFRAHLGKRVVAECVVRLAHRAGLLKKGECCVILPTAGELEAFEPGSWGTSAGAQEE---ERHPPFQGLERQAPSHGLGIGGMLRRFSSFTLEHPEGVARRAGDVGGGAAQAVAAPARNSEHEDIVALSTQPKSESEPLCAMASADRDALITLFHETRGANWREKGNWGTSEVLGTWYGVDVNAEGRVVKLSLYNNNLQGLLPPELGKLGALEHL 355          
BLAST of mRNA_Ecto-sp13_S_contig11555.1354.1 vs. uniprot
Match: D7FUH5_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH5_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 1.030e-31
Identity = 60/74 (81.08%), Postives = 65/74 (87.84%), Query Frame = 0
Query:  285 MASADRDALITLFHETRGANWREKGNWGTSEGLGTWYGVDVNAEGRVVKLSLYNNNLEGFLPPELGKLGALEHL 358
            MAS DR+ALI LF  TRGA WR+  NWGTSEGLGTWYGVDVNAEGRVVKLSLYNNNL+G LPP+LG LGAL+HL
Sbjct:    1 MASTDRNALIALFQATRGAEWRKSDNWGTSEGLGTWYGVDVNAEGRVVKLSLYNNNLQGSLPPQLGNLGALQHL 74          
BLAST of mRNA_Ecto-sp13_S_contig11555.1354.1 vs. uniprot
Match: D7FPS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS8_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 7.240e-19
Identity = 52/87 (59.77%), Postives = 59/87 (67.82%), Query Frame = 0
Query:  269 VPLSTQPKSESEPLCAMASADRDALITLFHETRGANWREKGNWGTSEGLGTWYGVDVNAEGRVVKLSLYNNNLEGFLPPELGKLGAL 355
            V ++  P+ E  P   MAS DRDAL+ LFH T G NW  K NW TS  LGTW GV VN EGRVV+L L +NNL G +P ELGKLGAL
Sbjct:  173 VVVTATPQPEVPP--PMASPDRDALVALFHATGGDNWTRKSNWCTSAKLGTWKGVKVNEEGRVVELDLSDNNLRGTIPVELGKLGAL 257          
BLAST of mRNA_Ecto-sp13_S_contig11555.1354.1 vs. uniprot
Match: A0A6H5KVC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVC7_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 1.100e-18
Identity = 45/85 (52.94%), Postives = 57/85 (67.06%), Query Frame = 0
Query:  274 QPKSESEPLCAMASADRDALITLFHETRGANWREKGNWGTSEGLGTWYGVDVNAEGRVVKLSLYNNNLEGFLPPELGKLGALEHL 358
            Q K  S P   MA  DR+AL+ L++ T GA W  K NW T   L  WYGV+V+++GRVV LSL  NNL+G +PPELG+L AL+ L
Sbjct:   85 QRKGGSAPYYTMAQPDREALVALYNATGGAKWENKRNWNTRAALSQWYGVEVDSQGRVVTLSLAGNNLQGTIPPELGQLTALQFL 169          
BLAST of mRNA_Ecto-sp13_S_contig11555.1354.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 3.110e-18
Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 0
Query:  285 MASADRDALITLFHETRGANWREKGNWGTSEGLGTWYGVDVNAEGRVVKLSLYNNNLEGFLPPELGKLGALEHL 358
            MAS DR+AL+ LF  T GA WR++GNW T   + TW+GV+VNA+GRVV LSL  N+L G +PPELG L  L+ L
Sbjct:    1 MASTDREALVALFRSTGGAGWRQRGNWDTDAAIATWHGVEVNAQGRVVNLSLGGNSLRGHIPPELGALSELQEL 74          
BLAST of mRNA_Ecto-sp13_S_contig11555.1354.1 vs. uniprot
Match: A0A6H5JBQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ0_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 4.230e-18
Identity = 46/73 (63.01%), Postives = 53/73 (72.60%), Query Frame = 0
Query:  285 MASADRDALITLFHETRGANWREKGNWGTSEGLGTWYGVDVNAEGRVVKLSLYNNNLEGFLPPELGKLGALEH 357
            MAS DRDAL+ LFH T G NW  K NW T+  LGTW GV VN +GRVV+L L +NNL G +P ELGKLGAL +
Sbjct:  189 MASPDRDALVALFHATGGDNWTRKSNWCTAARLGTWEGVQVNQQGRVVELDLSDNNLRGAIPGELGKLGALRN 261          
BLAST of mRNA_Ecto-sp13_S_contig11555.1354.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 6.760e-18
Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 0
Query:  285 MASADRDALITLFHETRGANWREKGNWGTSEGLGTWYGVDVNAEGRVVKLSLYNNNLEGFLPPELGKLGALEHL 358
            MA  DRDAL+ L+  T G NWRE+ NW T   L TW+GVDVN +GRVVKL L +NNLEG +P  LGKLG L+ L
Sbjct:    1 MAQTDRDALVVLYRATGGENWRERQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGNLQQL 74          
BLAST of mRNA_Ecto-sp13_S_contig11555.1354.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 6.810e-18
Identity = 42/72 (58.33%), Postives = 50/72 (69.44%), Query Frame = 0
Query:  285 MASADRDALITLFHETRGANWREKGNWGTSEGLGTWYGVDVNAEGRVVKLSLYNNNLEGFLPPELGKLGALE 356
            MA  DRDAL+ L+  T G NWRE  NW T   L TW+GVDVN +GRVVKL L +NNLEG +P  LG+L  L+
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQ 72          
BLAST of mRNA_Ecto-sp13_S_contig11555.1354.1 vs. uniprot
Match: A0A6H5KQP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQP2_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 8.890e-18
Identity = 42/74 (56.76%), Postives = 50/74 (67.57%), Query Frame = 0
Query:  285 MASADRDALITLFHETRGANWREKGNWGTSEGLGTWYGVDVNAEGRVVKLSLYNNNLEGFLPPELGKLGALEHL 358
            M S DR+AL++LF  T GA W  + NW T   L TW GV+VN +GRVV L L  NNL+G +PPELGKL AL  L
Sbjct:    1 MVSTDREALVSLFRSTGGAGWIRRDNWDTDADLATWNGVNVNVQGRVVNLDLQYNNLQGSIPPELGKLAALRAL 74          
BLAST of mRNA_Ecto-sp13_S_contig11555.1354.1 vs. uniprot
Match: D7G496_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G496_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 1.250e-17
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 0
Query:  278 ESEPLCAMASADRDALITLFHETRGANWREKGNWGTSEGLGTWYGVDVNAEGRVVKLSLYNNNLEGFLPPELGKLGALEHL 358
            E  P   MA  DR AL+ L++ T G  W+   NW TS  L  WY V+VN++GRVVKLSL+NNNL+G +P E+G+L  LE+L
Sbjct:  118 EKAPFYKMAQTDRKALVALYNATGGVKWKNNQNWNTSAALSQWYRVEVNSQGRVVKLSLWNNNLQGPIPVEVGRLAVLEYL 198          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11555.1354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3R3_ECTSI6.820e-19681.56Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FUH5_ECTSI1.030e-3181.08Leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
D7FPS8_ECTSI7.240e-1959.77Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KVC7_9PHAE1.100e-1852.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX56_ECTSI3.110e-1858.11LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JBQ0_9PHAE4.230e-1863.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBY3_ECTSI6.760e-1860.81Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JK91_9PHAE6.810e-1858.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQP2_9PHAE8.890e-1856.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G496_ECTSI1.250e-1751.85Hypothetical leucine rich repeat protein n=1 Tax=E... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 284..394
e-value: 2.3E-29
score: 104.0
NoneNo IPR availablePANTHERPTHR46084FAMILY NOT NAMEDcoord: 318..393
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 332..391

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11555contigEcto-sp13_S_contig11555:1581..4634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11555.1354.1mRNA_Ecto-sp13_S_contig11555.1354.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11555 1581..4634 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11555.1354.1 ID=prot_Ecto-sp13_S_contig11555.1354.1|Name=mRNA_Ecto-sp13_S_contig11555.1354.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=395bp
MPKHNRAPPASSPPATPPRTRHRRGQSSPPPNPSPSTQEPPASTLLPPPI
LADATVVLSSDKLEDLPCFDRASIGAAPSVNANRVWLPGQQVYLGILPLA
EAVAQLAPLATTIPPLPNAENFHAALARGESIEHGAEGGDASPEFRAHLG
KRVVAECVVRLTHSAGLLKKGECCVILPTADELEAFEPGLGGTSAGAQEE
KEEERHLPFQGLERQAPSHGLDVDGMQRRFSSFTLGHPDGAAQRAGVAGG
GAAQAMAAPARNSEREDIVPLSTQPKSESEPLCAMASADRDALITLFHET
RGANWREKGNWGTSEGLGTWYGVDVNAEGRVVKLSLYNNNLEGFLPPELG
KLGALEHLALDANWLSGSIPKQLGALTKLEKLLLYNNKLSGKMQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf