mRNA_Ecto-sp13_S_contig11554.1353.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11554.1353.1 vs. uniprot
Match: A0A6H5JGS0_9PHAE (G-patch domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGS0_9PHAE) HSP 1 Score: 220 bits (561), Expect = 5.090e-66 Identity = 113/117 (96.58%), Postives = 116/117 (99.15%), Query Frame = 3
Query: 732 MGWKLGQGLGAKGDGITVPVVLGTQVATLGLGKSAEDDRYTDEAARERKKLDSEVVETADMKAKRLEKAVRQETIKEQVQVRDQKTRIDAPMSPFPCHGRQKRLLRHSMKETWANMH 1082
MGWKLGQGLGAKGDGITVPVVLGTQVATLGLGKSAEDDRYTDEAARERKKLDSEVVETADMKAKRLEKAVRQETIKEQVQVR+ KTRIDAPMSPFPCHGRQ+RLLRHSM+ETWANMH
Sbjct: 1 MGWKLGQGLGAKGDGITVPVVLGTQVATLGLGKSAEDDRYTDEAARERKKLDSEVVETADMKAKRLEKAVRQETIKEQVQVRNHKTRIDAPMSPFPCHGRQQRLLRHSMEETWANMH 117
BLAST of mRNA_Ecto-sp13_S_contig11554.1353.1 vs. uniprot
Match: D7FTL2_ECTSI (WW domain, G-patch, C2H2 zinc finger n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTL2_ECTSI) HSP 1 Score: 177 bits (448), Expect = 9.330e-47 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 3
Query: 690 PIGEENRGFRLLTKMGWKLGQGLGAKGDGITVPVVLGTQVATLGLGKSAEDDRYTDEAARERKKLDSEVVETADMKAKRLEKAVRQETIKEQVQ 971
PIGEENRGFRLLTKMGWKLGQGLGAKGDGITVPVVLGTQVATLGLGKSAEDDRYTDEAARERKKLDSEVVETADMKAKRLEKAVRQETIKEQVQ
Sbjct: 109 PIGEENRGFRLLTKMGWKLGQGLGAKGDGITVPVVLGTQVATLGLGKSAEDDRYTDEAARERKKLDSEVVETADMKAKRLEKAVRQETIKEQVQ 202
BLAST of mRNA_Ecto-sp13_S_contig11554.1353.1 vs. uniprot
Match: A0A7S4DBH5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBH5_HETAK) HSP 1 Score: 90.5 bits (223), Expect = 8.330e-16 Identity = 55/94 (58.51%), Postives = 63/94 (67.02%), Query Frame = 3
Query: 693 IGEENRGFRLLTKMGWKLGQGLGAKGDGITVPVVLGTQVA--TLGLGKSAEDDRYTDEAARERKKLDSEVVETADMKAKRLEKAVRQETIKEQV 968
I E NRGF+LL KMGWK GQGLG G GIT PV L A TLGLGK+ E + D AA++RKKLD EV ET + KRL A +QETIK+ V
Sbjct: 133 IPENNRGFKLLVKMGWKRGQGLGKGGKGITAPVQLRPNEAGDTLGLGKAGEYEEKVDTAAKQRKKLDVEVEETDEEVTKRLADAEKQETIKQDV 226
BLAST of mRNA_Ecto-sp13_S_contig11554.1353.1 vs. uniprot
Match: K3WXR3_GLOUD (G-patch domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXR3_GLOUD) HSP 1 Score: 82.4 bits (202), Expect = 5.430e-14 Identity = 51/116 (43.97%), Postives = 66/116 (56.90%), Query Frame = 3
Query: 693 IGEENRGFRLLTKMGWKLGQGLGAKGDGITVPVVLGTQVATLGLGKSAEDDRYTDEAARERKKLDSEVVETADMKAKRLEKAVRQETIKEQVQVRDQKTRIDAPMSPFPCHGRQKR 1040
+ NRGF+LL KMGW+ G GLG GI P+ + + LGLGK+ E D ++A +ER+KLDSEVVET + RLEKA R + IK V+ A S F C QK+
Sbjct: 5 LDASNRGFQLLQKMGWRNGTGLGKHEQGIVEPIKMKENLVCLGLGKAEEYDAMNEQATKERRKLDSEVVETTEATQVRLEKAARDDQIKSDVK---------AIESAFFCQDCQKQ 111
BLAST of mRNA_Ecto-sp13_S_contig11554.1353.1 vs. uniprot
Match: A0A5D6XHN0_9STRA (G-patch domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHN0_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 8.730e-14 Identity = 45/89 (50.56%), Postives = 56/89 (62.92%), Query Frame = 3
Query: 693 IGEENRGFRLLTKMGWKLGQGLGAKGDGITVPVVLGTQVATLGLGKSAEDDRYTDEAARERKKLDSEVVETADMKAKRLEKAVRQETIK 959
+ NRGFRLL KMGW G GLG GI PV + + LGLGK+ E D T++A RER+KLD+EVVET + RL KA R + +K
Sbjct: 7 LDASNRGFRLLQKMGWTQGAGLGKNSQGIVEPVRMKENLVCLGLGKAEEYDAMTEQATRERRKLDAEVVETPEEVQSRLAKAARDDQLK 95
BLAST of mRNA_Ecto-sp13_S_contig11554.1353.1 vs. uniprot
Match: A0A6A3VWJ9_9STRA (G-patch domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3VWJ9_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 6.460e-13 Identity = 42/92 (45.65%), Postives = 58/92 (63.04%), Query Frame = 3
Query: 693 IGEENRGFRLLTKMGWKLGQGLGAKGDGITVPVVLGTQVATLGLGKSAEDDRYTDEAARERKKLDSEVVETADMKAKRLEKAVRQETIKEQV 968
+ NRG+RLL KMGW+ G GLG G+ PV + + LGLGK+ E D+ T A ER+KLD+EV ETA+ A+R + +QE +K +V
Sbjct: 22 LDASNRGYRLLVKMGWRSGSGLGKDAQGVVEPVKMKENLVCLGLGKAEEYDKVTQLATSERRKLDAEVAETAEQAAEREARGAQQEQLKAEV 113
BLAST of mRNA_Ecto-sp13_S_contig11554.1353.1 vs. uniprot
Match: G4ZPZ3_PHYSP (G-patch domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZPZ3_PHYSP) HSP 1 Score: 78.2 bits (191), Expect = 1.840e-12 Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 3
Query: 693 IGEENRGFRLLTKMGWKLGQGLGAKGDGITVPVVLGTQVATLGLGKSAEDDRYTDEAARERKKLDSEVVETADMKAKRLEKAVRQETIKEQV 968
+ NRG+RLL KMGW+ G GLG GI PV + + LGLGK+ E D+ T A ER+KLD+EV ETA+ A+R + +QE +K +V
Sbjct: 20 LDASNRGYRLLVKMGWRSGSGLGRHEQGIVEPVKMKENLVCLGLGKAEEYDKVTQLATSERRKLDAEVEETAEQVAEREARGAKQEQLKAEV 111
BLAST of mRNA_Ecto-sp13_S_contig11554.1353.1 vs. uniprot
Match: D0P1M6_PHYIT (G-patch domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0P1M6_PHYIT) HSP 1 Score: 77.0 bits (188), Expect = 3.830e-12 Identity = 43/92 (46.74%), Postives = 57/92 (61.96%), Query Frame = 3
Query: 693 IGEENRGFRLLTKMGWKLGQGLGAKGDGITVPVVLGTQVATLGLGKSAEDDRYTDEAARERKKLDSEVVETADMKAKRLEKAVRQETIKEQV 968
+ N G+RLL KMGW+ G GLG GI P+ + + LGLGK+AE D+ T A ER+KLD+EV ETA+ A R K R++ +K QV
Sbjct: 16 LDASNSGYRLLVKMGWRCGSGLGKHEQGIVEPLNMKENLVYLGLGKAAEYDKVTQLATSERRKLDAEVKETAEQTAAREAKGAREDQLKAQV 107
BLAST of mRNA_Ecto-sp13_S_contig11554.1353.1 vs. uniprot
Match: A0A421F7X3_9STRA (G-patch domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F7X3_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.480e-11 Identity = 41/92 (44.57%), Postives = 57/92 (61.96%), Query Frame = 3
Query: 693 IGEENRGFRLLTKMGWKLGQGLGAKGDGITVPVVLGTQVATLGLGKSAEDDRYTDEAARERKKLDSEVVETADMKAKRLEKAVRQETIKEQV 968
+ NRG+RLL KMGW+ G GLG GI PV + + TLGLGK+ E D+ T A ER+KLD EV ET + A R K +++ +K+++
Sbjct: 11 LDASNRGYRLLMKMGWRSGHGLGKCEQGIVEPVKMKENLVTLGLGKAEEYDQVTQLATSERRKLDVEVEETTEQVAAREAKGAKEQQLKDEI 102
BLAST of mRNA_Ecto-sp13_S_contig11554.1353.1 vs. uniprot
Match: A0A329S4I3_9STRA (G-patch domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S4I3_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.950e-11 Identity = 42/92 (45.65%), Postives = 57/92 (61.96%), Query Frame = 3
Query: 693 IGEENRGFRLLTKMGWKLGQGLGAKGDGITVPVVLGTQVATLGLGKSAEDDRYTDEAARERKKLDSEVVETADMKAKRLEKAVRQETIKEQV 968
+ N G+RLL KMGW+ G GLG + GI P+ + + LGLGK+ E D+ T A RER+KL +EV ETA+ A R K ++E +K QV
Sbjct: 16 LDASNCGYRLLMKMGWRSGSGLGKREQGIVEPLKMKENLVCLGLGKAEEYDKVTQLATRERRKLGAEVEETAEQTAAREAKGAKEEQLKAQV 107 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11554.1353.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11554.1353.1 >prot_Ecto-sp13_S_contig11554.1353.1 ID=prot_Ecto-sp13_S_contig11554.1353.1|Name=mRNA_Ecto-sp13_S_contig11554.1353.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=120bp MGWKLGQGLGAKGDGITVPVVLGTQVATLGLGKSAEDDRYTDEAARERKKback to top mRNA from alignment at Ecto-sp13_S_contig11554:333..2865- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11554.1353.1 ID=mRNA_Ecto-sp13_S_contig11554.1353.1|Name=mRNA_Ecto-sp13_S_contig11554.1353.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2533bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11554:333..2865- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11554:333..2865- >mRNA_Ecto-sp13_S_contig11554.1353.1 ID=mRNA_Ecto-sp13_S_contig11554.1353.1|Name=mRNA_Ecto-sp13_S_contig11554.1353.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=360bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11554:333..2865- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |