prot_Ecto-sp13_S_contig1154.1345.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1154.1345.1
Unique Nameprot_Ecto-sp13_S_contig1154.1345.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length460
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1154.1345.1 vs. uniprot
Match: D7G6E2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E2_ECTSI)

HSP 1 Score: 700 bits (1806), Expect = 1.640e-251
Identity = 399/425 (93.88%), Postives = 405/425 (95.29%), Query Frame = 0 
Query:   35 LSRRAIPRMRRLLSSSSDQAAEAHAQLESLHEVSKAVDLAALGRRAEAAPLLERAVEICSGSMGEDSALTRAAVHRLAQVLYDDQRFGAAEATLRKGESNARKQFPTELLLLSKAQLFQGKIPVAVETSSRAVDLCQQDEDNTPDTDALGQALRQLGVIQALSGEKDDAETSLLRAARLGSTSADQGKGLAAVAAFNIARGDEQSVEEAVELLNEACATTTESDEHKEPTXXXXXXXXXXXXXXXXXXXXXATSKVARLAHASVLSTAAQGELVLERGTATASERLGEALRIREQLLPIGHPATAWTLSLLARCHVAAGEAVTAEGLFRAALDSLQGIAEEADDGIARSQRSAGAVALPLLFASPLHPYTKAATLRGYSELLLQWEKREAEGEVVARQAEKVESSLLLKPPGGLTLHMLHLDDVY 459
            LS+RAIPRMRRLLSSSSDQAAEA+AQLESLHEVS AVDLAALGRR EAA LLERAVEICSGSMGED ALTRAAVHRLAQVLYDDQRFGAAEA LRKGESNARKQFPTELLLLSKAQLFQGKIPVAVETSSRAVDLCQQDEDNTPDTDALGQALRQLGVIQ LSGE+DDAETSLLRAARLGSTSADQGKGLAAVAAFNIARGDEQSVEEAVELLNEACATT+ESDEHKEPT XXXXXXXXX  XX       ATSKVARLAHASVLSTAAQGELVLERGTATASERLGEAL+IREQLLPIGHPATAWTLSLLARCHVAAGEAVTAEGLFRAALDSLQGIAEE DDGIAR QRSAG VALPLLFASPLHP+TKAATLRGYSELLLQWEKREAEGEVVARQAEKVESSLLLKPP GLTLHMLHLDDVY
Sbjct:    3 LSQRAIPRMRRLLSSSSDQAAEANAQLESLHEVSTAVDLAALGRRTEAASLLERAVEICSGSMGEDCALTRAAVHRLAQVLYDDQRFGAAEAILRKGESNARKQFPTELLLLSKAQLFQGKIPVAVETSSRAVDLCQQDEDNTPDTDALGQALRQLGVIQVLSGEEDDAETSLLRAARLGSTSADQGKGLAAVAAFNIARGDEQSVEEAVELLNEACATTSESDEHKEPTAXXXXXXXXXGGXXNDAAASAATSKVARLAHASVLSTAAQGELVLERGTATASERLGEALKIREQLLPIGHPATAWTLSLLARCHVAAGEAVTAEGLFRAALDSLQGIAEEVDDGIARRQRSAGTVALPLLFASPLHPHTKAATLRGYSELLLQWEKREAEGEVVARQAEKVESSLLLKPPVGLTLHMLHLDDVY 427
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BLAST of mRNA_Ecto-sp13_S_contig1154.1345.1 vs. uniprot
Match: A0A835ZDH7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH7_9STRA)

HSP 1 Score: 162 bits (410), Expect = 4.630e-42
Identity = 136/394 (34.52%), Postives = 195/394 (49.49%), Query Frame = 0 
Query:   97 MGEDSALTRAAVHRLAQVLYDDQRFGAAEATLRK----GESNAR-KQFPTELLLLSKAQLFQGKIPVAVETSSRAVDLCQQDEDN-TPDTDALGQALRQLGVIQALSGEKDDAETSLLRAARLGSTSADQGKG-----------------LAAVAAFNIARGDEQSVEEAVELLNEACATTTESDEHKEPTXXXXXXXXXXXXXXXXXXXXXATSKVARLAHASVLSTAAQGELVLERG------------TATASERLGEALRIREQLLPIGHPATAWTLSLLARCHVAAGEAVTAEGLFRAALDSLQGIAEEADDGIARSQRSAGAVALPLLFASPLHPYTKAATLRGYSELLLQWEKREAEGEVVARQAEKVESSLLLKPPGGLTLHMLHL 455
            MG+++ LT+AA  RL   LY   R   AEA +R     G+  A+  ++   +LL+++AQLFQGK+  A  T + AV  C+      TPDT ALG ALR LGV+Q L G+ D AETSLLRAARL   +ADQ K                  L+++AA++++    +   +A+E   EA +  T +D     +                      T +  +  HA  L+  A+  L    G            T   S  L EAL++ EQ +    P   W L+ LARC   AG AVTAEGLFR+A++ +       D    R +++        +  SP + +    TL  YS+LLLQWEKREA G  + ++A+ +E+ L LK P  ++L MLHL
Sbjct:    1 MGKEALLTQAANRRLGLTLYRAGRLAEAEAAVRAAVGAGDGAAQLAEYVGAVLLVARAQLFQGKLAAAAATCADAVRACEDGVSGATPDTAALGNALRSLGVVQLLRGDGDAAETSLLRAARLSDGAADQAKARIARQGPAVARVLVVCALSSLAAYSMSIETAEGHRDALEYWQEAVSVLTAADAQAAASACAK------------------TKRELQETHAITLTNLAEAALTGAPGPYETAGAGGKADTERPSAHLREALKLSEQSMGHNDPYLGWVLAQLARCCHLAGSAVTAEGLFRSAMEKM-------DPEDVRGKQALA------MHPSPANIFLLQGTLSMYSQLLLQWEKREAVGRKMQQRAQDLEAGLPLKLPPRVSLPMLHL 363
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1154.1345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6E2_ECTSI1.640e-25193.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZDH7_9STRA4.630e-4234.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 43..308
e-value: 4.6E-13
score: 50.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 309..439
e-value: 3.4E-8
score: 35.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 69..367
NoneNo IPR availablePFAMPF13424TPR_12coord: 68..135
e-value: 9.2E-8
score: 32.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1154contigEcto-sp13_S_contig1154:119..3775 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1154.1345.1mRNA_Ecto-sp13_S_contig1154.1345.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1154 2..4027 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1154.1345.1 ID=prot_Ecto-sp13_S_contig1154.1345.1|Name=mRNA_Ecto-sp13_S_contig1154.1345.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=460bp
MSSPVSHSLFYPFRRCFVIISRSNMVFLGTRRAGLSRRAIPRMRRLLSSS
SDQAAEAHAQLESLHEVSKAVDLAALGRRAEAAPLLERAVEICSGSMGED
SALTRAAVHRLAQVLYDDQRFGAAEATLRKGESNARKQFPTELLLLSKAQ
LFQGKIPVAVETSSRAVDLCQQDEDNTPDTDALGQALRQLGVIQALSGEK
DDAETSLLRAARLGSTSADQGKGLAAVAAFNIARGDEQSVEEAVELLNEA
CATTTESDEHKEPTATAEEESEKERGDGNGAAASAATSKVARLAHASVLS
TAAQGELVLERGTATASERLGEALRIREQLLPIGHPATAWTLSLLARCHV
AAGEAVTAEGLFRAALDSLQGIAEEADDGIARSQRSAGAVALPLLFASPL
HPYTKAATLRGYSELLLQWEKREAEGEVVARQAEKVESSLLLKPPGGLTL
HMLHLDDVY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf