prot_Ecto-sp13_S_contig1149.1306.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1149.1306.1
Unique Nameprot_Ecto-sp13_S_contig1149.1306.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length431
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1149.1306.1 vs. uniprot
Match: D8LDU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU9_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 1.760e-103
Identity = 275/333 (82.58%), Postives = 275/333 (82.58%), Query Frame = 0 
Query:   67 AAKGVAGSPGKAKAKKPASPKPGRAPVGGGKISLGNNNSNGGG--SQATIVGPVPGGVSGSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQKNALKKFKFVCSLCVKVRLKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GKPSPGANGFSGDVEVVKGKPRKKTVKPKAAGAGAGGVEGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDKKAEEGSGKPRXXXXXXXXXXXXXXXXXXXEQPARKSAMDVSDEDDSWGEESVDEDGRGEKGARASAYSTRDRKGRVTYVEEASDNED 396
            A KGVAGSPGKAKAKKPASPK G A V                  SQAT VGPVPGGVSGSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQKNALKKFKFVCSLCVKVRLKV                 XXXXXXXXXXXXXXXXXX   GKPSPGANGFSGDVEVVKGKPRKKTVKPKAA AGAGGV G APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  TDKKA EGSGKPR XXXXXXXXXXX       EQPARKSAMD SDEDDSWGEESVDEDGRGEKGARASAYSTRDRKGRVTYVEEASDNED
Sbjct:   62 APKGVAGSPGKAKAKKPASPKQGGASVXXXXXXXXXXXXXXXXXXSQATTVGPVPGGVSGSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQKNALKKFKFVCSLCVKVRLKVEKRKGKAAKVRGRKGASXXXXXXXXXXXXXXXXXXTDAGKPSPGANGFSGDVEVVKGKPRKKTVKPKAADAGAGGVVGVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGTDKKAGEGSGKPRKXXXXXXXXXXXAAA----EQPARKSAMDGSDEDDSWGEESVDEDGRGEKGARASAYSTRDRKGRVTYVEEASDNED 390
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BLAST of mRNA_Ecto-sp13_S_contig1149.1306.1 vs. uniprot
Match: A0A6H5KVU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU7_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 2.540e-91
Identity = 302/327 (92.35%), Postives = 302/327 (92.35%), Query Frame = 0 
Query:  111 QATIVGPVPGGVSGSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQKNALKKFKFVCSLCVKVRLKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GKPSPGANGFSGDVEVVKGKPRKKTVKPKAAGAGAGGVEGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-TDKKAEEGSGKPRXXXXXXXXXXXXXXXXXXXEQPARKSAMDVSDEDDSWGEESVDEDGRGEKGARASAYSTRDRKGRVTYVEEASDNEDXXXXXXXXXXXXXXXXXXXXXXA----MAAADAIASLAG 431
             AT VGP PGGVSGSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQKNALKKFKFVCSLCVKVR   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GKPS GANGFSGDVEVVKGKPRKKTVKPKAAGAGAG V G APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TD KA EGSGKPRXXXXXXXXXXXXXX     EQPARKSAMDVSDEDDSWGEESVDEDGRGEKGARASAYSTRDRKGRVTYVEEASDNEDXXXXXXXXXXXXXXXXXXXXXX     MAAADAIASLAG
Sbjct:   72 SATTVGPAPGGVSGSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQKNALKKFKFVCSLCVKVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGKPSRGANGFSGDVEVVKGKPRKKTVKPKAAGAGAGRVVGVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTDTKAGEGSGKPRXXXXXXXXXXXXXXA----EQPARKSAMDVSDEDDSWGEESVDEDGRGEKGARASAYSTRDRKGRVTYVEEASDNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAADAIASLAG 394
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1149.1306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDU9_ECTSI1.760e-10382.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVU7_9PHAE2.540e-9192.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 128..183
e-value: 1.2E-5
score: 34.8
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 128..183
e-value: 3.1E-7
score: 30.2
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 126..185
score: 8.502
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 122..188
e-value: 1.8E-10
score: 42.3
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 125..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1149contigEcto-sp13_S_contig1149:15526..18644 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1149.1306.1mRNA_Ecto-sp13_S_contig1149.1306.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1149 14249..18644 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1149.1306.1 ID=prot_Ecto-sp13_S_contig1149.1306.1|Name=mRNA_Ecto-sp13_S_contig1149.1306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=431bp
MDGGGGNEAVVKAATAAAAAAAEASSAPLPPQKQQQQQQPAKKKKRPPSQ
EAASPGGTPSSRKKKKAAKGVAGSPGKAKAKKPASPKPGRAPVGGGKISL
GNNNSNGGGSQATIVGPVPGGVSGSSIYCVCHSSDEGFMVECSDGTGGCG
GWFHPECCNLELSPEQRQKNALKKFKFVCSLCVKVRLKVEKRKGKAAKGR
GRKGASSSPSSTQPPPSPPPSSSSATGKPSPGANGFSGDVEVVKGKPRKK
TVKPKAAGAGAGGVEGAAPPAAGAAAAAAGMPPPSSKPKLKRRRSSGGSS
SAGGKGTDKKAEEGSGKPRKPKLKRQRSAAAAVAAAAAEQPARKSAMDVS
DEDDSWGEESVDEDGRGEKGARASAYSTRDRKGRVTYVEEASDNEDDYLT
DDDDNGGGDVSSSKRGSAAMAAADAIASLAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD