prot_Ecto-sp13_S_contig11411.1244.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11411.1244.1
Unique Nameprot_Ecto-sp13_S_contig11411.1244.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length148
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11411.1244.1 vs. uniprot
Match: D8LS90_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS90_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 1.100e-76
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0 
Query:   13 GTSVLSVAGEAGLFWEVESRLWLLLGPFGTVGGLELDEEEARSSVHLCRGLSGLHLLPALTRNLGILLTARAIRKLQESGVVSRIKLSHVDHRTGGPAAVGPARFKGLGEEAAAVKRRLRDKCRRRWVATRGSA 146
            GTSVLS+AGEAGLFWEVESRLWLLLGPFG VGGLELDEEEARSSVHLCRGLSGLHLLPALTRNLGILLTARAIRKLQESGVVSRIKLSHVDHRTGGPAAVGPARFKGLGEEAAAVKRRLRDKCRRRWVATRGSA
Sbjct: 1028 GTSVLSMAGEAGLFWEVESRLWLLLGPFGAVGGLELDEEEARSSVHLCRGLSGLHLLPALTRNLGILLTARAIRKLQESGVVSRIKLSHVDHRTGGPAAVGPARFKGLGEEAAAVKRRLRDKCRRRWVATRGSA 1161
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11411.1244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LS90_ECTSI1.100e-7698.51eIF3_p135 domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11411contigEcto-sp13_S_contig11411:3282..4662 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11411.1244.1mRNA_Ecto-sp13_S_contig11411.1244.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11411 3280..4662 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11411.1244.1 ID=prot_Ecto-sp13_S_contig11411.1244.1|Name=mRNA_Ecto-sp13_S_contig11411.1244.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp
AEGAGHRRSPSGGTSVLSVAGEAGLFWEVESRLWLLLGPFGTVGGLELDE
EEARSSVHLCRGLSGLHLLPALTRNLGILLTARAIRKLQESGVVSRIKLS
HVDHRTGGPAAVGPARFKGLGEEAAAVKRRLRDKCRRRWVATRGSAAA
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