prot_Ecto-sp13_S_contig1141.1240.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1141.1240.1
Unique Nameprot_Ecto-sp13_S_contig1141.1240.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length688
Homology
BLAST of mRNA_Ecto-sp13_S_contig1141.1240.1 vs. uniprot
Match: D7G1A2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1A2_ECTSI)

HSP 1 Score: 1002 bits (2590), Expect = 0.000e+0
Identity = 631/692 (91.18%), Postives = 636/692 (91.91%), Query Frame = 0
Query:    1 MYPKDRIRDKTQQVPPNLMTLFAHVMSRANEGGSRGSAAAHGWDEVLNAAXXXXXXXXXXXXXXXXSL--GTISPGPCCPMSAQDWRKAEAFSVHLQSLLAARDALCGSNGSGSSSXXRGAGATAGGTGQSNGASSSSLYGPQSGAEXXXXXXXXXXADGREPSSFPGGRKDSTPHANGRAKGGRAKAPAAPSGAAATPNNATGTAWPQHVPGATPKESSSRGGGEEPSAPIKAVGRVAVSRRVNGGAEGAVASLAVSRAGPGAFETPAHTTSHHHXXXXXXXXXXXXXXXXXXXXTEDXXXXXXXX--NSLRGREHSPSRYPARLRSRRFPQLGGXXXXXXXXXXXXXXXDSRTGGAGIDGLEGHQSQGGRRLSPRHSPPASVGREHGRGIPPDARRQHKAHDWVVTAGAEKRAAGXXXXXXXXXXXXRGEEEGGVFTHDGGSGHEGXXXXAGEGYGMRTRAAAPKGSYELGPAAVASSGPSSSPMPGACTPQMTTGAVFSPAPMDFRSAPPPIMSXXXXXXXXXXVAAGRPSPRAEVAAPRPRQVLQGGGRSGGRAAPLPRSSVGGRNYTDNHVKQLGLIEAAVVASATARDRATYNLPRQGRTLTLTNVFKFIALRGAGTMYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDEAITKSRKFSKILLSLIAEGCTHPDCDWDH 688
            MYPKDRIRDKTQQ+PPNLMTLFAHVMSRANEGGSRGSAAAHGWDEVLNAAXXXXXXXXXXXXXXXX    GTISPGPCCPMSAQDWRKAEAFSVHLQSLLAARDALCGSNGS SSS  RGAGAT G             YGPQSGAE          ADGREPS FPGGRKDSTPHANGRAKGGRAKAPAAPSGAAATPNNA GTAWPQHVPGATPKESSSRGGGEEPSAPIKAVGRVAVSRRVNGGAEGAVASLAVSRAGPGAFETPAH+TSHH XXXXXXXXXXXXXXXXXX  T D XXXXXXX  NSLRGREHSPSRYPARLRSRRFPQLGGXXXXXXXXXXXXXXX  R G AG DGLEGHQSQGGRRLSPRHSPPASVGREHGRGIP DARRQH AH WVVTAGAEKRAAGXXXXXXXXXXXXRGEEEGGVFTHDGG GHEG X  AGEGYGMRTRAAAPKGSYELGPAAVASSGPSSSP+PGACTPQ+TTGAV SP PMDFR APPPIMSXXXXXXXXXXVAAGRPSPRAEVAAPRPRQVLQGGGRSGGRAAPLPRSSVGGRNYTDNHVKQLGLIEAAVVASATARDRATYNLPRQGRTLTLTNVFKFIALRGAG MYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDEAITKSRKFSKILLSL+AEGCTHPDCDWDH
Sbjct:    1 MYPKDRIRDKTQQMPPNLMTLFAHVMSRANEGGSRGSAAAHGWDEVLNAAXXXXXXXXXXXXXXXXXXXSGTISPGPCCPMSAQDWRKAEAFSVHLQSLLAARDALCGSNGS-SSSSSRGAGATTGXXXXXXXXXXXXYYGPQSGAEGRCSPASSGPADGREPSPFPGGRKDSTPHANGRAKGGRAKAPAAPSGAAATPNNAAGTAWPQHVPGATPKESSSRGGGEEPSAPIKAVGRVAVSRRVNGGAEGAVASLAVSRAGPGAFETPAHSTSHHXXXXXXXXXXXXXXXXXXXPGTVDSXXXXXXXXXNSLRGREHSPSRYPARLRSRRFPQLGGXXXXXXXXXXXXXXX--RAGDAGADGLEGHQSQGGRRLSPRHSPPASVGREHGRGIPSDARRQHNAHGWVVTAGAEKRAAGXXXXXXXXXXXXRGEEEGGVFTHDGGRGHEGGXGRAGEGYGMRTRAAAPKGSYELGPAAVASSGPSSSPLPGACTPQITTGAVVSPVPMDFRPAPPPIMSXXXXXXXXXXVAAGRPSPRAEVAAPRPRQVLQGGGRSGGRAAPLPRSSVGGRNYTDNHVKQLGLIEAAVVASATARDRATYNLPRQGRTLTLTNVFKFIALRGAGAMYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDEAITKSRKFSKILLSLVAEGCTHPDCDWDH 689          
BLAST of mRNA_Ecto-sp13_S_contig1141.1240.1 vs. uniprot
Match: A0A835YUT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT3_9STRA)

HSP 1 Score: 172 bits (437), Expect = 8.800e-43
Identity = 83/130 (63.85%), Postives = 101/130 (77.69%), Query Frame = 0
Query:  559 RSSVGGRNYTDNHVKQLGLIEAAVVASATARDRATYNLPRQGRTLTLTNVFKFIALRGAGTMYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDEAITKSRKFSKILLSLIAEGCTHPDCDWDH 688
            R+SVGGRNYTD  ++QL LIEA VVA AT  D A +NLPRQ RTL LTN+FK+IALRGA  ++ +A+ + +E  TGRHSNF+DGKID RIV V+K D+ D A T SRKFSK+LLSL+AEGC  P CDW +
Sbjct:  369 RTSVGGRNYTDEQLRQLQLIEAEVVARATPGDHAAFNLPRQARTLALTNMFKYIALRGAARLHAMAVARGLEGRTGRHSNFYDGKIDTRIVAVVKHDMDDAAATASRKFSKVLLSLLAEGCGDPSCDWSY 498          
BLAST of mRNA_Ecto-sp13_S_contig1141.1240.1 vs. uniprot
Match: A0A835YSU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSU2_9STRA)

HSP 1 Score: 113 bits (282), Expect = 8.960e-23
Identity = 53/92 (57.61%), Postives = 72/92 (78.26%), Query Frame = 0
Query:  578 IEAAVVASATARDRATYNLPRQGRTLTLTNVFKFIALRGAGTMYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDEAITKSRKFSK 669
            IEA V A AT  DRA ++LPRQ RTL LTN+FK+IALRGA  M+ LA+ + +    G+HSNF+DGKIDAR+V ++++D+GD+  T++RKFSK
Sbjct:  313 IEARVAARATDADRAAFSLPRQARTLALTNMFKYIALRGAAQMHALAVLRGLHTCGGKHSNFYDGKIDARVVAIVRRDVGDDVATQTRKFSK 404          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1141.1240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1A2_ECTSI0.000e+091.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUT3_9STRA8.800e-4363.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YSU2_9STRA8.960e-2357.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1141contigEcto-sp13_S_contig1141:1..3499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1141.1240.1mRNA_Ecto-sp13_S_contig1141.1240.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1141 1..4381 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1141.1240.1 ID=prot_Ecto-sp13_S_contig1141.1240.1|Name=mRNA_Ecto-sp13_S_contig1141.1240.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=688bp
MYPKDRIRDKTQQVPPNLMTLFAHVMSRANEGGSRGSAAAHGWDEVLNAA
ASSSPSSTTSSSSSSSSLGTISPGPCCPMSAQDWRKAEAFSVHLQSLLAA
RDALCGSNGSGSSSSSRGAGATAGGTGQSNGASSSSLYGPQSGAEGRSSP
ASSGPADGREPSSFPGGRKDSTPHANGRAKGGRAKAPAAPSGAAATPNNA
TGTAWPQHVPGATPKESSSRGGGEEPSAPIKAVGRVAVSRRVNGGAEGAV
ASLAVSRAGPGAFETPAHTTSHHHHHLHHVHHHADRAGAAGVPGTEDSSG
GGGGNNSLRGREHSPSRYPARLRSRRFPQLGGGGESPESQPPPHHHHDSR
TGGAGIDGLEGHQSQGGRRLSPRHSPPASVGREHGRGIPPDARRQHKAHD
WVVTAGAEKRAAGAGGGGSGSGSGSRGEEEGGVFTHDGGSGHEGGGGRAG
EGYGMRTRAAAPKGSYELGPAAVASSGPSSSPMPGACTPQMTTGAVFSPA
PMDFRSAPPPIMSAAAAAAAVAAVAAGRPSPRAEVAAPRPRQVLQGGGRS
GGRAAPLPRSSVGGRNYTDNHVKQLGLIEAAVVASATARDRATYNLPRQG
RTLTLTNVFKFIALRGAGTMYRLAMDKQVEAHTGRHSNFFDGKIDARIVG
VIKKDIGDEAITKSRKFSKILLSLIAEGCTHPDCDWDH
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