mRNA_Ecto-sp13_S_contig11404.1232.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11404.1232.1 vs. uniprot
Match: A0A6H5KYQ7_9PHAE (Zeta_toxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ7_9PHAE) HSP 1 Score: 500 bits (1287), Expect = 9.490e-174 Identity = 270/311 (86.82%), Postives = 286/311 (91.96%), Query Frame = 1
Query: 1 GAGKSHVMGVLGERGLFPMDDFVQVDPDSLRRKLPEMEGYVRRDPGTAGSLTHKEAGLLAELLEETALLQGRNILVDGSMRNGEWYAEHVGDLRRRFPRLRVAIIHVWAPEEEVMKRAVRRGLSTGRVIPPAVLRDTIRAVPRSVEMLAPLADYCVRIDNVGDDGWRQSQESQLRQSRRVLPQHSTCLVSSEMSEMVMMPASXXXXXXXXXXXXARLQSSEISEITRPVGSSLDVPTACTGDEPRSAAKGGGEGRSGSHSEVPAVMMPVLATAGETWESFRRTFAQDPXXXXXXXXXXXXXXXXXIGNPHE 933
GAGKSHVMGVLG+RGLFPMDDFV+VDPDSLRRKLPEMEGYVR DPGTAG LTHKEAGLL ELLEETALLQGRNILV+GSMRNGEWYAEH+ D RRRFPRLRVAIIHVWAPEEEVMKRAVRRGL+TGRVIPPA+LRDTIRAVPRSVEMLAPLADYCVRIDNVGDDGWRQSQESQ +QSRR L QH++CLVSSEMS+MVMMP SXXXXXXXXX ARLQSS++SEI+RPVGSSLDVPTACTGD RSAA+GGGEGRSG+HSEVPAV+MPVLATAGETWESFRRTFAQDPXXXXXX IGNPHE
Sbjct: 216 GAGKSHVMGVLGDRGLFPMDDFVRVDPDSLRRKLPEMEGYVRSDPGTAGYLTHKEAGLLGELLEETALLQGRNILVEGSMRNGEWYAEHIRDRRRRFPRLRVAIIHVWAPEEEVMKRAVRRGLTTGRVIPPALLRDTIRAVPRSVEMLAPLADYCVRIDNVGDDGWRQSQESQQQQSRRPLRQHNSCLVSSEMSDMVMMPTSXXXXXXXXXSASARLQSSDMSEISRPVGSSLDVPTACTGDASRSAAEGGGEGRSGAHSEVPAVIMPVLATAGETWESFRRTFAQDPXXXXXX-----------IGNPHE 515
BLAST of mRNA_Ecto-sp13_S_contig11404.1232.1 vs. uniprot
Match: D7FLS0_ECTSI (Zeta_toxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLS0_ECTSI) HSP 1 Score: 467 bits (1201), Expect = 1.300e-160 Identity = 263/315 (83.49%), Postives = 274/315 (86.98%), Query Frame = 1
Query: 1 GAGKSHVMGVLGERGLFPMDDFVQVDPDSLRRKLPEMEGYVRRDPGTAGSLTHKEAGLLAELLEETALLQGRNILVDGSMRNGEWYAEHVGDLRRRFPRLRVAIIHVWAPEEEVMKRAVRRGLSTGRVIPPAVLRDTIRAVPRSVEMLAPLADYCVRIDNVGDDGWRQSQESQLRQSRRVLPQHSTCLVSSEMSEMVMMPASXXXXXXXXXXXX-ARLQSSEISEITRPVGSSLDVPTACT---GDEPRSAAKGGGEGRSGSHSEVPAVMMPVLATAGETWESFRRTFAQDPXXXXXXXXXXXXXXXXXIGNPHE 933
GAGKSHVMGVLGERGLFPMD FVQVDPDSLRRKLPEMEGYVR DPGTAGSLTHKEAGLLAELLEETALLQGRNILVDGSMRNGEWYAEHVGDLRRRFPRLRVAIIHVWAPEEEVMKRAVRRGL+TGRVIPP+VLRDTIRAVPRSVEMLAPLADYCVRIDNVGDD RQSQE CLVSS+MSEMV+MPAS XXXXXXXX ARLQSS++ EI+RPVGSSLDVPTACT GDE RSAA+GGGEGRS +HSEVPAV+MPVLAT+GETWESFRRTFAQDPXXXXXX IGNPHE
Sbjct: 218 GAGKSHVMGVLGERGLFPMDAFVQVDPDSLRRKLPEMEGYVRSDPGTAGSLTHKEAGLLAELLEETALLQGRNILVDGSMRNGEWYAEHVGDLRRRFPRLRVAIIHVWAPEEEVMKRAVRRGLTTGRVIPPSVLRDTIRAVPRSVEMLAPLADYCVRIDNVGDDWRRQSQEXXXXXXXXXXXXXXXCLVSSDMSEMVLMPASNEXXXXXXXXSSSARLQSSDMPEISRPVGSSLDVPTACTACTGDETRSAAEGGGEGRSRAHSEVPAVIMPVLATSGETWESFRRTFAQDPXXXXXX-----------IGNPHE 521
BLAST of mRNA_Ecto-sp13_S_contig11404.1232.1 vs. uniprot
Match: A0A7S2EVP6_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVP6_TRICV) HSP 1 Score: 173 bits (439), Expect = 1.290e-45 Identity = 89/165 (53.94%), Postives = 109/165 (66.06%), Query Frame = 1
Query: 1 GAGKSHVMGVLGERGLFPMDDFVQVDPDSLRRKLPEMEGYVRRDPGTAGSLTHKEAGLLAELLEETALLQGRNILVDGSMRNGEWYAEHVGDLRRRFPRLRVAIIHVWAPEEEVMKRAVRRGLSTGRVIPPAVLRDTIRAVPRSVEMLAPLADYCVRIDNVGDDG 495
GAGK HV+ L G FP+ FV+VDPD +RR LPE YV DP TAG LTHKEAG ++E+L AL G+N+LVDGS+R+ EWY + DLR+R P R+AI+HV AP E V +RA RG TGR++P L + VPRSVE+L ADY IDN G DG
Sbjct: 137 GAGKGHVVDHLVREGYFPLLAFVKVDPDDIRRHLPEFRSYVEADPLTAGRLTHKEAGYVSEILTLAALQAGKNVLVDGSLRDAEWYGRYFDDLRKRHPNNRIAILHVTAPRELVFERAAERGKRTGRMVPEETLTAALEQVPRSVEILKRKADYFCEIDN-GYDG 300
BLAST of mRNA_Ecto-sp13_S_contig11404.1232.1 vs. uniprot
Match: K0RQ61_THAOC (Zeta_toxin domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RQ61_THAOC) HSP 1 Score: 162 bits (410), Expect = 1.360e-45 Identity = 72/150 (48.00%), Postives = 104/150 (69.33%), Query Frame = 1
Query: 31 LGERGLFPMDDFVQVDPDSLRRKLPEMEGYVRRDPGTAGSLTHKEAGLLAELLEETALLQGRNILVDGSMRNGEWYAEHVGDLRRRFPRLRVAIIHVWAPEEEVMKRAVRRGLSTGRVIPPAVLRDTIRAVPRSVEMLAPLADYCVRIDN 480
L RGLFP+ +V+VDPD +R PE Y +++P AG LT++EAG + E++ + AL +G N+LVDGS+RN WY ++ LR +P LR+AI+H+ APEE +++RA RRG TGRV+P L+D++ VP SV++LAPL DY + N
Sbjct: 4 LDSRGLFPLKSYVKVDPDEIRSYFPEYHSYAQKEPERAGELTNREAGYITEIIAKIALKEGYNVLVDGSLRNSTWYGQYFSHLRSEYPVLRIAILHITAPEEAILERAERRGKETGRVVPIETLQDSLTQVPESVKLLAPLTDYFCELHN 153
BLAST of mRNA_Ecto-sp13_S_contig11404.1232.1 vs. uniprot
Match: I2CPU2_NANGC (Zeta toxin (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPU2_NANGC) HSP 1 Score: 162 bits (410), Expect = 3.400e-45 Identity = 80/160 (50.00%), Postives = 108/160 (67.50%), Query Frame = 1
Query: 1 GAGKSHVMGVLGERGLFPMDDFVQVDPDSLRRKLPEMEGYVRRDPGTAGSLTHKEAGLLAELLEETALLQGRNILVDGSMRNGEWYAEHVGDLRRRFPRLRVAIIHVWAPEEEVMKRAVRRGLSTGRVIPPAVLRDTIRAVPRSVEMLAPLADYCVRIDN 480
GAGKSH + L GLFP++DFV DPD +R +LPEM+GY++ P AG LTH+EAG + E++ E L +G+N+LV GS+R+ +W+A + DLR RFP LR+AIIHV A E V+ RA +R +T R +P VL ++ P +V L L DYCV IDN
Sbjct: 23 GAGKSHTLRWLALHGLFPLNDFVLADPDVIRNELPEMKGYIQTCPLRAGQLTHREAGYMLEIVVEEGLKEGKNVLVQGSLRDADWHARYFQDLRARFPGLRIAIIHVTASCETVLARARQRAQTTKREVPEDVLLASVHETPWAVAALRQLVDYCVSIDN 182
BLAST of mRNA_Ecto-sp13_S_contig11404.1232.1 vs. uniprot
Match: A0A7R9WY90_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WY90_9STRA) HSP 1 Score: 162 bits (409), Expect = 8.630e-44 Identity = 80/163 (49.08%), Postives = 105/163 (64.42%), Query Frame = 1
Query: 1 GAGKSHVMGVLGERGLFPMDDFVQVDPDSLRRKLPEMEGYVRRDPGTAGSLTHKEAGLLAELLEETALLQGRNILVDGSMRNGEWYAEHVGDLRRRFPRLRVAIIHVWAPEEEVMKRAVRRGLSTGRVIPPAVLRDTIRAVPRSVEMLAPLADYCVRIDNVGD 489
GAGKS+ M L + FP+ FV VDPD +R LPE YV +P AG LT KEAG +AE+L AL G+N+L DGS+R+ +WY + LR+ FP LR AI+H+ AP E V+KRA R L TGRV+P +L + + VPRSV++L PL DY ++N D
Sbjct: 120 GAGKSYTMNKLVGKDRFPLTAFVVVDPDEIRHLLPEFHVYVEENPVLAGELTRKEAGYIAEILTLAALQAGKNVLQDGSLRDSDWYQTYFARLRKDFPSLRQAILHITAPREAVLKRAADRALVTGRVVPEHILEEAMEQVPRSVKILGPLVDYYAELNNAPD 282
BLAST of mRNA_Ecto-sp13_S_contig11404.1232.1 vs. uniprot
Match: A0A1Z5JA71_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JA71_FISSO) HSP 1 Score: 166 bits (421), Expect = 1.450e-43 Identity = 83/163 (50.92%), Postives = 114/163 (69.94%), Query Frame = 1
Query: 1 GAGKSHVMGVLGERGLFPMDDFVQVDPDSLRRKLPEMEGYVRRDPGTAGSLTHKEAGLLAELLEETALLQGRNILVDGSMRNGEWYAEHVGDLRRRFPRLRVAIIHVWAPEEEVMKRAVRRGLSTGRVIPPAVLRDTIRAVPRSVEMLAPLADYCVRIDNVGD 489
G+GKS+ M L RGLFP+ FV+VDPD LRR LPE Y+++ P AG+LT KEAGL++E+L AL +G+N+LVDGS+R+ WY E+ LR +P +R+AIIHV AP E V+ RA +R STGR++P +L I VP+SV+ LAPL +Y V ++N +
Sbjct: 395 GSGKSYTMRHLVNRGLFPLLAFVRVDPDELRRYLPEFHLYIQQSPEDAGTLTRKEAGLISEILTLAALQEGKNVLVDGSLRDAPWYEEYFEKLRGTYPHVRLAIIHVSAPREMVLARASKRAHSTGRIVPEELLLAAIDEVPKSVKKLAPLVNYHVELENADE 557
BLAST of mRNA_Ecto-sp13_S_contig11404.1232.1 vs. uniprot
Match: A0A7S1BFA9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BFA9_9STRA) HSP 1 Score: 160 bits (405), Expect = 2.830e-43 Identity = 78/160 (48.75%), Postives = 109/160 (68.12%), Query Frame = 1
Query: 1 GAGKSHVMGVLGERGLFPMDDFVQVDPDSLRRKLPEMEGYVRRDPGTAGSLTHKEAGLLAELLEETALLQGRNILVDGSMRNGEWYAEHVGDLRRRFPRLRVAIIHVWAPEEEVMKRAVRRGLSTGRVIPPAVLRDTIRAVPRSVEMLAPLADYCVRIDN 480
GAGK H + L ER L P+ FV VDPD +R+ LPE + Y++ +P AG LT KEAG + E+L + AL G+N+LVDGS+R+ +WY ++ LR +P LR+AI+HV AP E V++RA +RG TGR IP A L + VP++V+ L+PL+DY +DN
Sbjct: 86 GAGKGHTIRNLVERKLLPLQGFVVVDPDEVRQFLPEYKIYIKENPMMAGELTRKEAGFICEILTQAALQSGKNVLVDGSLRDSDWYIQYFAQLRADYPVLRLAILHVTAPREAVLERAQKRGEMTGRKIPIATLEMAMDQVPKAVQHLSPLSDYFCELDN 245
BLAST of mRNA_Ecto-sp13_S_contig11404.1232.1 vs. uniprot
Match: A0A7S4QXS6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QXS6_9STRA) HSP 1 Score: 156 bits (394), Expect = 3.340e-43 Identity = 76/160 (47.50%), Postives = 108/160 (67.50%), Query Frame = 1
Query: 1 GAGKSHVMGVLGERGLFPMDDFVQVDPDSLRRKLPEMEGYVRRDPGTAGSLTHKEAGLLAELLEETALLQGRNILVDGSMRNGEWYAEHVGDLRRRFPRLRVAIIHVWAPEEEVMKRAVRRGLSTGRVIPPAVLRDTIRAVPRSVEMLAPLADYCVRIDN 480
GAGKS+ + L + G FP+ FV VDPD +RR+LPE +V +P AG LT KEAG +AE+L L G+N++VDGS+R+ +WY + LRR + +R+AI+H+ AP + V++RA RG +TGRVIP L + VPRSV++L PLADY +++N
Sbjct: 16 GAGKSYTINSLVDDGRFPLLAFVLVDPDEIRRQLPEYSYFVEHNPELAGELTRKEAGYMAEILTLAGLQAGKNVMVDGSLRDSDWYQIYFAQLRREYDGIRIAILHIDAPRDAVIQRAKERGEATGRVIPMKTLLMALEQVPRSVKILGPLADYFCKLNN 175
BLAST of mRNA_Ecto-sp13_S_contig11404.1232.1 vs. uniprot
Match: A0A448ZLW3_9STRA (Zeta_toxin domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLW3_9STRA) HSP 1 Score: 158 bits (399), Expect = 6.270e-43 Identity = 82/163 (50.31%), Postives = 105/163 (64.42%), Query Frame = 1
Query: 1 GAGKSHVMGVLGERGLFPMDDFVQVDPDSLRRKLPEMEGYVRRDPGTAGSLTHKEAGLLAELLEETALLQGRNILVDGSMRNGEWYAEHVGDLRRRFPRLRVAIIHVWAPEEEVMKRAVRRGLSTGRVIPPAVLRDTIRAVPRSVEMLAPLADYCVRIDNVGD 489
GAGKSH M VL E+ FP+ FV VDPD +RR LPE YV ++P G LT KEAG +AE+L AL G+N+L DGS+R+ WY LR P++R AIIHV AP++ ++ RA R L TGRV+P +L I+ VP+SV++LAPL DY I N D
Sbjct: 67 GAGKSHTMLVLVEQERFPLPAFVIVDPDQIRRLLPEYHMYVAKNPEMVGKLTQKEAGYIAEVLTLAALQSGKNVLQDGSLRDHGWYKVLFHRLREAHPQVRQAIIHVTAPKQAILDRAAERALLTGRVVPEEILEQAIQEVPKSVKILAPLVDYYAEISNPPD 229 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11404.1232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11404.1232.1 >prot_Ecto-sp13_S_contig11404.1232.1 ID=prot_Ecto-sp13_S_contig11404.1232.1|Name=mRNA_Ecto-sp13_S_contig11404.1232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=305bp MGVLGERGLFPMDDFVQVDPDSLRRKLPEMEGYVRRDPGTAGSLTHKEAGback to top mRNA from alignment at Ecto-sp13_S_contig11404:1933..5326- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11404.1232.1 ID=mRNA_Ecto-sp13_S_contig11404.1232.1|Name=mRNA_Ecto-sp13_S_contig11404.1232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3394bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11404:1933..5326- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11404:1933..5326- >mRNA_Ecto-sp13_S_contig11404.1232.1 ID=mRNA_Ecto-sp13_S_contig11404.1232.1|Name=mRNA_Ecto-sp13_S_contig11404.1232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=915bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11404:1933..5326- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |