prot_Ecto-sp13_S_contig114.1223.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig114.1223.1
Unique Nameprot_Ecto-sp13_S_contig114.1223.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length306
Homology
BLAST of mRNA_Ecto-sp13_S_contig114.1223.1 vs. uniprot
Match: D7FJK8_ECTSI (rRNA biogenesis protein RRP36 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK8_ECTSI)

HSP 1 Score: 499 bits (1285), Expect = 5.950e-177
Identity = 282/293 (96.25%), Postives = 287/293 (97.95%), Query Frame = 0
Query:   13 MRKRAEMLPSDDEVSGQSSGEEASDNDSWDDEDLDEIEAATEEQPSKEQGESIGERLIKLSHGTGPSRRKRHIRDNTGGEQKQASAAKTARDRARSGIAAHQQARGGDSGSGRTKAPSRANKNRPQEASSRRAVGRFREVVVTKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSLKKEKNQERSGRLQALLTRLQQERAERYQGDRTRTAIREAKKKEREAVASGKKPFFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLPSKRQK 305
            MRKRAEM PSDDEV+GQSSGEEASDNDSWDDEDLDE EAATEEQP+KEQGESIGERLIKLSHG GPSRRKRHIRD+TGGEQKQA+AAKTARDR RSGIAAHQQARGG+SGSGRTK PSRANKNRPQEASSRRAVGRFREVVVTKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSLKKEKNQERSGRLQALLTRLQQERAER QGDRTRTAIREAKKKEREAVASGKKPFFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLPSKRQK
Sbjct:    1 MRKRAEMQPSDDEVNGQSSGEEASDNDSWDDEDLDENEAATEEQPNKEQGESIGERLIKLSHGAGPSRRKRHIRDSTGGEQKQANAAKTARDRTRSGIAAHQQARGGNSGSGRTKVPSRANKNRPQEASSRRAVGRFREVVVTKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSLKKEKNQERSGRLQALLTRLQQERAERSQGDRTRTAIREAKKKEREAVASGKKPFFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLPSKRQK 293          
BLAST of mRNA_Ecto-sp13_S_contig114.1223.1 vs. uniprot
Match: A0A835YP85_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP85_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.090e-47
Identity = 99/182 (54.40%), Postives = 133/182 (73.08%), Query Frame = 0
Query:  129 PSRANKNRPQEASSRRAVGRFREVVVTKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSLKKEKNQ------ERSGRLQALLTRLQQERAERYQGDRTRTAIREAKKKEREAVASGKKPFFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLPSKRQ 304
            P RANKN+P E SS+RAVGR REVV  +R+ +RDPRF+   G+  LNYD+FRK+Y FL  YQD EI+ L+K   K K +      ER+   +ALLT++QQERAER + D TR A+ + +K E EAVA GK P+F+K  +++ L+LE RYE L+ +GK+ KF++KKRK+NAAKD RW+P+KRQ
Sbjct:  175 PKRANKNQPMEMSSKRAVGRHREVVEVRRRRARDPRFDAATGT--LNYDMFRKSYEFLEGYQDGEIDALRKEAAKAKKRRGDGSAERAAAAKALLTKMQQERAERKRADATRAALSQRRKAEAEAVAKGKAPYFMKARDRRALALETRYEELRREGKVQKFVQKKRKRNAAKDRRWMPAKRQ 354          
BLAST of mRNA_Ecto-sp13_S_contig114.1223.1 vs. uniprot
Match: T0S1H5_SAPDV (rRNA biogenesis protein RRP36 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S1H5_SAPDV)

HSP 1 Score: 162 bits (410), Expect = 2.260e-45
Identity = 92/173 (53.18%), Postives = 129/173 (74.57%), Query Frame = 0
Query:  131 RANKNRPQEASSRRAVGRFREVVVTKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSLKKEKNQERSGRLQALLTRLQQERAERYQGDRTRTAIREAKKKEREAVASGKKPFFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLPSKR 303
            RANKN P+E +S+R V RFREV+  ++K SRDPRF+   G  KLN D+F+KAY FL  Y+D+E++E+KK LKK K+  R   L+  L   +QERAE ++ D+ R A ++ K++EREAVA+GK  F+LK  +KK++ L+ +Y+ L+E G+LSKFM K+RKKNA KDHRWLP++R
Sbjct:   46 RANKNCPREMTSKRPVARFREVLQIRKKASRDPRFDAASG--KLNEDLFKKAYTFLEDYKDAELDEVKKQLKKAKSATRKAALKEELASRKQERAETHRADKIREATQKRKREEREAVANGKSAFYLKRKDKKQVELKAKYDELQESGRLSKFMAKRRKKNANKDHRWLPTQR 216          
BLAST of mRNA_Ecto-sp13_S_contig114.1223.1 vs. uniprot
Match: A0A1V9YXH6_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YXH6_9STRA)

HSP 1 Score: 160 bits (406), Expect = 7.510e-45
Identity = 91/173 (52.60%), Postives = 130/173 (75.14%), Query Frame = 0
Query:  131 RANKNRPQEASSRRAVGRFREVVVTKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSLKKEKNQERSGRLQALLTRLQQERAERYQGDRTRTAIREAKKKEREAVASGKKPFFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLPSKR 303
            RANKN P+E +S+R V RFREV+  ++K SRDPRF+   G  KLN D+F+K+Y FL  Y+D+E++++KK L+K K++ R   L+A L   +QERAE ++ DR R A  + K++EREAVA+GK  F+LK  +KK++ L+ +Y+ L+E G+LSKFM K+RKKNA KDHRWLP++R
Sbjct:   42 RANKNCPREMTSKRPVARFREVLQIRKKGSRDPRFDNASG--KLNEDLFKKSYAFLEDYKDAELDDVKKQLRKAKSKTRREELKADLATRKQERAESHRADRIREATLKRKREEREAVANGKSAFYLKRKDKKQIELKAKYDELQESGRLSKFMAKRRKKNANKDHRWLPTQR 212          
BLAST of mRNA_Ecto-sp13_S_contig114.1223.1 vs. uniprot
Match: A0A2P4X8B4_9STRA (rRNA biogenesis protein RRP36 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4X8B4_9STRA)

HSP 1 Score: 157 bits (396), Expect = 2.550e-43
Identity = 90/173 (52.02%), Postives = 126/173 (72.83%), Query Frame = 0
Query:  131 RANKNRPQEASSRRAVGRFREVVVTKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSLKKEKNQERSGRLQALLTRLQQERAERYQGDRTRTAIREAKKKEREAVASGKKPFFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLPSKR 303
            RANKN+P E SS+RAVGRFR+VV  K+K   DPRFE   G  +LN D+F K+Y FL  Y+  E++ELK+ LKK KN  +   L+  +   QQE  E+ + ++ ++A+ + K++EREAVASGK  F+LK  +KK+L L+ +++ L+E G+LSKFM KKRKKNA+KDHRWLP++R
Sbjct:   46 RANKNQPLELSSKRAVGRFRQVVEVKKKRVLDPRFEAQSG--RLNEDLFNKSYAFLDEYKQRELQELKQQLKKTKNMTKKDELKHEIALRQQEMTEKNKQEKIKSALTKRKREEREAVASGKGAFYLKRKDKKKLELQAKFQDLQETGRLSKFMAKKRKKNASKDHRWLPTQR 216          
BLAST of mRNA_Ecto-sp13_S_contig114.1223.1 vs. uniprot
Match: A0A662WCQ7_9STRA (rRNA biogenesis protein RRP36 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WCQ7_9STRA)

HSP 1 Score: 156 bits (394), Expect = 7.180e-43
Identity = 88/173 (50.87%), Postives = 126/173 (72.83%), Query Frame = 0
Query:  131 RANKNRPQEASSRRAVGRFREVVVTKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSLKKEKNQERSGRLQALLTRLQQERAERYQGDRTRTAIREAKKKEREAVASGKKPFFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLPSKR 303
            RANKNRP E +S+RAVGRF++VV  K++   DPRFE   G  +LN D+F K+Y FL  Y+  E+ ELK+ LK  K+  R   ++  ++   QER+E+ + ++ R A+ + K++EREAVASGK PF+LK  +KK+L L+ +++ L+E G+LSKFM KKRKKNA+KDHRWLP++R
Sbjct:   58 RANKNRPMELTSKRAVGRFKQVVEVKKRRVLDPRFEAQSG--RLNEDLFAKSYSFLDEYKQRELGELKRQLKSAKSTTRKEEIKHEISLRSQERSEKQKTEKIRDALTKRKREEREAVASGKNPFYLKRKDKKKLELQAKFQNLQETGRLSKFMAKKRKKNASKDHRWLPTQR 228          
BLAST of mRNA_Ecto-sp13_S_contig114.1223.1 vs. uniprot
Match: A0A7S2Y0G1_9STRA (rRNA biogenesis protein RRP36 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0G1_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.600e-42
Identity = 100/188 (53.19%), Postives = 125/188 (66.49%), Query Frame = 0
Query:  131 RANKNRPQEASSRRAVGRFREVVV---------TKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSLKKEKNQERSG-----RLQALLTRLQQERAERYQGDRTRTAIREAKKKEREAVASGKKP-FFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLPSKR 303
            R NKNRP E SS+  VGR+R+V V          ++   RDPRFEG  G  K+NYD+FRK Y FL  YQDSEI+ L+  LKK + + +SG      +Q  L +L+QER++R +GDR R  +   KK ER AV  GKK  F+LKG  KK + LEQRY+ LKE G+L KFMEKKRKKNA+KDHRWLP+ R
Sbjct:   34 RENKNRPVERSSKVPVGRYRDVAVRPGDGSQSTAQKYQPRDPRFEGVSG--KMNYDLFRKTYQFLEQYQDSEIQALEAELKKAQKKSKSGAERVSEVQLALQKLRQERSQRVRGDRVRGVLGAHKKLERRAVQQGKKKAFYLKGKAKKEIVLEQRYQELKEKGQLKKFMEKKRKKNASKDHRWLPAAR 219          
BLAST of mRNA_Ecto-sp13_S_contig114.1223.1 vs. uniprot
Match: G4YS32_PHYSP (rRNA biogenesis protein RRP36 n=4 Tax=Phytophthora TaxID=4783 RepID=G4YS32_PHYSP)

HSP 1 Score: 154 bits (390), Expect = 1.890e-42
Identity = 88/173 (50.87%), Postives = 127/173 (73.41%), Query Frame = 0
Query:  131 RANKNRPQEASSRRAVGRFREVVVTKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSLKKEKNQERSGRLQALLTRLQQERAERYQGDRTRTAIREAKKKEREAVASGKKPFFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLPSKR 303
            RANKN+P E SS+RAVGRFR+VV  K++ + DPRFE   G  +LN D+F K+Y FL  Y+  E++ELK+ LKK K+  +   L+  +   QQE  E+ + ++ ++A+ + K++EREAVASGK  F+LK  +KK+L L+ +++ L+E G+LSKFM KKRKKNA+KDHRWLP++R
Sbjct:   44 RANKNQPLELSSKRAVGRFRQVVEVKKRRALDPRFEAQSG--RLNEDLFNKSYAFLDDYKQRELQELKQQLKKTKSVTKKDELKHEIALRQQEMTEKQKTEKIKSALTKRKREEREAVASGKGAFYLKRKDKKKLELQAKFQDLQETGRLSKFMAKKRKKNASKDHRWLPTQR 214          
BLAST of mRNA_Ecto-sp13_S_contig114.1223.1 vs. uniprot
Match: A0A3R7A8U5_9STRA (rRNA biogenesis protein RRP36 n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7A8U5_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.980e-42
Identity = 90/173 (52.02%), Postives = 128/173 (73.99%), Query Frame = 0
Query:  131 RANKNRPQEASSRRAVGRFREVVVTKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSLKKEKNQERSGRLQALLTRLQQERAERYQGDRTRTAIREAKKKEREAVASGKKPFFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLPSKR 303
            RANKNRP+E +S+R VGRFREV+  ++KT+RDPRF+   G  KLN D+F+K+Y FL   +++E++E KK LK  K++ R   LQ  ++  +QE AE  + DR R A  + K++EREAV +GK  F+LK  +KK+L L+ +++ L+E G+LSKFMEK+RKKNA KDHRWLP++R
Sbjct:   81 RANKNRPREITSKRPVGRFREVLQVRKKTTRDPRFDHASG--KLNEDLFKKSYAFLDDIKEAELQEAKKQLKHAKSKTRKTELQQDISSRKQELAEAKRADRIRDANLKRKREEREAVENGKGAFYLKRKDKKQLELKAKFDELQESGRLSKFMEKRRKKNANKDHRWLPTQR 251          
BLAST of mRNA_Ecto-sp13_S_contig114.1223.1 vs. uniprot
Match: A0A3M6VW06_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VW06_9STRA)

HSP 1 Score: 153 bits (387), Expect = 5.460e-42
Identity = 88/173 (50.87%), Postives = 126/173 (72.83%), Query Frame = 0
Query:  131 RANKNRPQEASSRRAVGRFREVVVTKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSLKKEKNQERSGRLQALLTRLQQERAERYQGDRTRTAIREAKKKEREAVASGKKPFFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLPSKR 303
            RANKN+P E SS+RAVGRFR+VV  K+K   DPRFE   G  +LN D+F K+Y FL  Y+  E+++LK+ LKK K+  +   L+  +   QQE  E+ + D+ ++A+ + K++EREAVASGK  F+LK  +KK++ L+ +++ L+E G+LSKFM KKRKKNA+KDHRWLP++R
Sbjct:   45 RANKNQPLELSSKRAVGRFRQVVEVKKKRLLDPRFEAQSG--RLNEDLFNKSYAFLDEYKQRELQQLKQQLKKTKSVAKKDELKHEIALRQQEMTEKQKRDKIQSALTKRKREEREAVASGKGAFYLKRKDKKKVELQAKFQDLQETGRLSKFMAKKRKKNASKDHRWLPTQR 215          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig114.1223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJK8_ECTSI5.950e-17796.25rRNA biogenesis protein RRP36 n=2 Tax=Ectocarpus T... [more]
A0A835YP85_9STRA1.090e-4754.40rRNA biogenesis protein RRP36 n=1 Tax=Tribonema mi... [more]
T0S1H5_SAPDV2.260e-4553.18rRNA biogenesis protein RRP36 n=2 Tax=Saprolegnia ... [more]
A0A1V9YXH6_9STRA7.510e-4552.60rRNA biogenesis protein RRP36 n=1 Tax=Achlya hypog... [more]
A0A2P4X8B4_9STRA2.550e-4352.02rRNA biogenesis protein RRP36 n=2 Tax=Phytophthora... [more]
A0A662WCQ7_9STRA7.180e-4350.87rRNA biogenesis protein RRP36 n=2 Tax=Nothophytoph... [more]
A0A7S2Y0G1_9STRA1.600e-4253.19rRNA biogenesis protein RRP36 (Fragment) n=1 Tax=F... [more]
G4YS32_PHYSP1.890e-4250.87rRNA biogenesis protein RRP36 n=4 Tax=Phytophthora... [more]
A0A3R7A8U5_9STRA1.980e-4252.02rRNA biogenesis protein RRP36 n=6 Tax=Aphanomyces ... [more]
A0A3M6VW06_9STRA5.460e-4250.87rRNA biogenesis protein RRP36 n=1 Tax=Peronospora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 203..223
NoneNo IPR availableCOILSCoilCoilcoord: 257..277
IPR009292rRNA biogenesis protein RRP36PFAMPF06102RRP36coord: 131..297
e-value: 1.4E-47
score: 161.7
IPR009292rRNA biogenesis protein RRP36PANTHERPTHR21738UNCHARACTERIZEDcoord: 97..304

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig114contigEcto-sp13_S_contig114:17406..20738 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig114.1223.1mRNA_Ecto-sp13_S_contig114.1223.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig114 16830..20988 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig114.1223.1 ID=prot_Ecto-sp13_S_contig114.1223.1|Name=mRNA_Ecto-sp13_S_contig114.1223.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=306bp
MNLNTRDLGEERMRKRAEMLPSDDEVSGQSSGEEASDNDSWDDEDLDEIE
AATEEQPSKEQGESIGERLIKLSHGTGPSRRKRHIRDNTGGEQKQASAAK
TARDRARSGIAAHQQARGGDSGSGRTKAPSRANKNRPQEASSRRAVGRFR
EVVVTKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKS
LKKEKNQERSGRLQALLTRLQQERAERYQGDRTRTAIREAKKKEREAVAS
GKKPFFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLP
SKRQK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009292RRP36