prot_Ecto-sp13_S_contig114.1222.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig114.1222.1
Unique Nameprot_Ecto-sp13_S_contig114.1222.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length158
Homology
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BLAST of mRNA_Ecto-sp13_S_contig114.1222.1 vs. uniprot
Match: A0A6H5KLX5_9PHAE (HORMA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLX5_9PHAE)

HSP 1 Score: 288 bits (738), Expect = 3.340e-97
Identity = 148/157 (94.27%), Postives = 151/157 (96.18%), Query Frame = 0 
Query:    1 MEQGVVRRVLVCFFLDEEHVDQAPVERVAFDVRVDDDGDDFVDSTSLQDVEDQLRSALLQIQKSSAHLPTRQGCTFALHVEAHEDKEGQVGWHDATQDSGQSSPVRSALRGGKWVLADSVAQGVVTEPGRRRIVPIKSVRGRGLSLNLSTEMGDCSV 157
            MEQGVVRRVLVCFFL+EEHVDQAPVERVAFDVRVD+DGDD VDSTSLQDVEDQLRSALLQIQKSSAHLPTRQGCTFALHVEAHED EGQVG HDATQD  QSSPVRSALRGGKWVLADSVAQGV+ EPGRRRIVPIKSVRGRGLSLNLSTEMGDCSV
Sbjct:   73 MEQGVVRRVLVCFFLEEEHVDQAPVERVAFDVRVDNDGDDSVDSTSLQDVEDQLRSALLQIQKSSAHLPTRQGCTFALHVEAHEDNEGQVGRHDATQDYAQSSPVRSALRGGKWVLADSVAQGVLAEPGRRRIVPIKSVRGRGLSLNLSTEMGDCSV 229
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig114.1222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KLX5_9PHAE3.340e-9794.27HORMA domain-containing protein n=2 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036570HORMA domain superfamilyGENE3D3.30.900.10coord: 1..154
e-value: 1.8E-17
score: 65.7
IPR036570HORMA domain superfamilySUPERFAMILY56019The spindle assembly checkpoint protein mad2coord: 2..95
NoneNo IPR availablePANTHERPTHR11842MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2coord: 2..151
NoneNo IPR availablePANTHERPTHR11842:SF10MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2Bcoord: 2..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig114contigEcto-sp13_S_contig114:3511..4725 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig114.1222.1mRNA_Ecto-sp13_S_contig114.1222.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig114 3485..5339 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig114.1222.1 ID=prot_Ecto-sp13_S_contig114.1222.1|Name=mRNA_Ecto-sp13_S_contig114.1222.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=158bp
MEQGVVRRVLVCFFLDEEHVDQAPVERVAFDVRVDDDGDDFVDSTSLQDV
EDQLRSALLQIQKSSAHLPTRQGCTFALHVEAHEDKEGQVGWHDATQDSG
QSSPVRSALRGGKWVLADSVAQGVVTEPGRRRIVPIKSVRGRGLSLNLST
EMGDCSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036570HORMA_dom_sf