Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig100912.121.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
| Match Name | E-value | Identity | Description | |
|---|
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR005162 | Retrotransposon gag domain | PFAM | PF03732 | Retrotrans_gag | coord: 8..62
e-value: 2.6E-5
score: 24.4 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig100912.121.1 ID=prot_Ecto-sp13_S_contig100912.121.1|Name=mRNA_Ecto-sp13_S_contig100912.121.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=116bp
QANSYPPPATWVELKTALLHRLMPSNIVEETALSLVNLRQAGDENVSSYA
LRLQTECTRFEQAVERITPGRSPYQALVVTLFQNGLVPNIRSKVLDKKPV
RALRDAIDRARRTESA back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR005162 | Retrotrans_gag_dom |
|