prot_Ecto-sp13_S_contig11328.1180.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig11328.1180.1
Unique Name	prot_Ecto-sp13_S_contig11328.1180.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	471

Homology

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BLAST of mRNA_Ecto-sp13_S_contig11328.1180.1 vs. uniprot
Match: D7G409_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G409_ECTSI)

HSP 1 Score: 784 bits (2025), Expect = 5.890e-284
Identity = 435/472 (92.16%), Postives = 441/472 (93.43%), Query Frame = 0

Query:    1 MDSPRSPASGTPITAWQTPWSQTIHHDEPAPPRSTNSSRQHH-QPSLPSQGRRGNGSFQREXXXXXXXXXXXXXXQHRQASLELLEARSLNRVLEQESVLDKEEIAALCQEQEEVLQANSALQAELEEARASLTEVCREVERLSAALTKQASLLTSEKNRRRDAETELGRCKSALVAAADRCSDPSSGSSRSVDNPGATSVEDNASSMGSTDGSHSTGSSVERPVLARASAVVDGAGPIDDDPEPDLPDLFHSVQSAMTGTVSRWIKGMQAACSPGLRQALVLPWLLHKLFFLSTEVIDERRQELVSIFEEG-AVGGSESTKESSVTLHDHLNRHYPTAFPLQGEKLKAAIKTVMMSLAHSMIESEEWNPEAKNADAVQSALAASGLEKIVEEYLNIAVGCLLRSYSFTDDLGDVERFDPNRHFDPVDGEVTGELCVVIFPALVGGDGVEGEGEEEAGLLLGRRFVMNYQGK 470
            MDSPRSPA  TPITAWQTPWSQT HHDEPAPPRSTN+S +H  QPSLPSQGRRGNGSFQRE       XXXXXXX HRQASLELLEARSLNRVLEQESVLDKEEIAAL QEQEEVLQANSALQAELEEARASLTEVCREVERLSAALTKQASLLTSEKNRRRDAETELGRCKSALVAAADRCSDPSSGSS SVDNPGA SVEDNASSMGSTDGSHSTGSSVERPVLA ASA+VDGAGPIDDDPEPDLPDLFHSVQSAMTGTVSRWIKGMQAACSPGLRQALVLPWLLHKLFFLSTE+IDERRQELVSIFEE  AVGG+E  KESSVTLH HLNRHY T FPLQG+KL AA KTVMMSLAHSMIESEEWNPEAKNADAVQSALAASGLEKIVEEYLNIAVGCLLRSYSFTDDLGDVERFDPNRHFDPVDGEVTGELCVVIFPALVGGDG EGEGEEE G LL RRFVMNYQGK
Sbjct:    1 MDSPRSPAE-TPITAWQTPWSQTNHHDEPAPPRSTNNSTRHQDQPSLPSQGRRGNGSFQRERERERGQXXXXXXXXHRQASLELLEARSLNRVLEQESVLDKEEIAALYQEQEEVLQANSALQAELEEARASLTEVCREVERLSAALTKQASLLTSEKNRRRDAETELGRCKSALVAAADRCSDPSSGSSTSVDNPGAASVEDNASSMGSTDGSHSTGSSVERPVLASASAIVDGAGPIDDDPEPDLPDLFHSVQSAMTGTVSRWIKGMQAACSPGLRQALVLPWLLHKLFFLSTELIDERRQELVSIFEEEVAVGGNEGAKESSVTLHHHLNRHYRTVFPLQGDKLMAATKTVMMSLAHSMIESEEWNPEAKNADAVQSALAASGLEKIVEEYLNIAVGCLLRSYSFTDDLGDVERFDPNRHFDPVDGEVTGELCVVIFPALVGGDGGEGEGEEEEGRLLRRRFVMNYQGK 471

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig11328.1180.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig11328.1180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G409_ECTSI	5.890e-284	92.16	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 111..145

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig11328	contig	Ecto-sp13_S_contig11328:698..3875 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig11328.1180.1	mRNA_Ecto-sp13_S_contig11328.1180.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig11328 698..3875 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig11328.1180.1 ID=prot_Ecto-sp13_S_contig11328.1180.1|Name=mRNA_Ecto-sp13_S_contig11328.1180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=471bp
MDSPRSPASGTPITAWQTPWSQTIHHDEPAPPRSTNSSRQHHQPSLPSQG
RRGNGSFQRERERERGQRRQHQHRQHRQASLELLEARSLNRVLEQESVLD
KEEIAALCQEQEEVLQANSALQAELEEARASLTEVCREVERLSAALTKQA
SLLTSEKNRRRDAETELGRCKSALVAAADRCSDPSSGSSRSVDNPGATSV
EDNASSMGSTDGSHSTGSSVERPVLARASAVVDGAGPIDDDPEPDLPDLF
HSVQSAMTGTVSRWIKGMQAACSPGLRQALVLPWLLHKLFFLSTEVIDER
RQELVSIFEEGAVGGSESTKESSVTLHDHLNRHYPTAFPLQGEKLKAAIK
TVMMSLAHSMIESEEWNPEAKNADAVQSALAASGLEKIVEEYLNIAVGCL
LRSYSFTDDLGDVERFDPNRHFDPVDGEVTGELCVVIFPALVGGDGVEGE
GEEEAGLLLGRRFVMNYQGK*