prot_Ecto-sp13_S_contig10085.117.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig10085.117.1
Unique Name	prot_Ecto-sp13_S_contig10085.117.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	122

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig10085.117.1 vs. uniprot
Match: D7FYS4_ECTSI (40S ribosomal protein S14 n=3 Tax=Sar TaxID=2698737 RepID=D7FYS4_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 1.990e-69
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0

Query:   13 HITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 121
            HITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL
Sbjct:   43 HITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 151

[Close]

BLAST of mRNA_Ecto-sp13_S_contig10085.117.1 vs. uniprot
Match: A0A7J8M0W2_9ROSI (Uncharacterized protein n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A7J8M0W2_9ROSI)

HSP 1 Score: 206 bits (523), Expect = 1.490e-66
Identity = 102/114 (89.47%), Postives = 111/114 (97.37%), Query Frame = 0

Query:    8 YRNVQHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 121
            + ++QH+TDLSGRETMVR+TGGMKVKADRDE+SPYAAMLAAQDV+ RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    3 WLDLQHVTDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 116

[Close]

BLAST of mRNA_Ecto-sp13_S_contig10085.117.1 vs. uniprot
Match: A0A804R4M6_MAIZE (Uncharacterized protein n=3 Tax=Panicoideae TaxID=147369 RepID=A0A804R4M6_MAIZE)

HSP 1 Score: 204 bits (520), Expect = 2.460e-66
Identity = 101/111 (90.99%), Postives = 109/111 (98.20%), Query Frame = 0

Query:   11 VQHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 121
            +QH+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTP+PTD TRRKGGRRGRRL
Sbjct:    1 MQHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 111

[Close]

BLAST of mRNA_Ecto-sp13_S_contig10085.117.1 vs. uniprot
Match: A0A0D9W4P5_9ORYZ (Uncharacterized protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9W4P5_9ORYZ)

HSP 1 Score: 206 bits (523), Expect = 6.270e-66
Identity = 101/112 (90.18%), Postives = 110/112 (98.21%), Query Frame = 0

Query:   10 NVQHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 121
            N+QH+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLA+QDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTP+PTD TRRKGGRRGRRL
Sbjct:   61 NLQHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 172

[Close]

BLAST of mRNA_Ecto-sp13_S_contig10085.117.1 vs. uniprot
Match: A0A2G5CAB9_AQUCA (Uncharacterized protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5CAB9_AQUCA)

HSP 1 Score: 204 bits (518), Expect = 1.150e-65
Identity = 102/109 (93.58%), Postives = 107/109 (98.17%), Query Frame = 0

Query:   13 HITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 121
            H+TDLSGRETMVR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:   29 HVTDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 137

[Close]

BLAST of mRNA_Ecto-sp13_S_contig10085.117.1 vs. uniprot
Match: A0A835H9E5_9MAGN (Uncharacterized protein n=2 Tax=Coptis chinensis TaxID=261450 RepID=A0A835H9E5_9MAGN)

HSP 1 Score: 204 bits (519), Expect = 1.280e-65
Identity = 102/109 (93.58%), Postives = 107/109 (98.17%), Query Frame = 0

Query:   13 HITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 121
            H+TDLSGRETMVR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:   43 HVTDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVATRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 151

[Close]

BLAST of mRNA_Ecto-sp13_S_contig10085.117.1 vs. uniprot
Match: K3YAJ9_SETIT (Uncharacterized protein n=7 Tax=Magnoliopsida TaxID=3398 RepID=K3YAJ9_SETIT)

HSP 1 Score: 204 bits (518), Expect = 1.820e-65
Identity = 102/109 (93.58%), Postives = 107/109 (98.17%), Query Frame = 0

Query:   13 HITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 121
            HITDLSGRETMVR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTP+PTD TRRKGGRRGRRL
Sbjct:   43 HITDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 151

[Close]

BLAST of mRNA_Ecto-sp13_S_contig10085.117.1 vs. uniprot
Match: A0A5P1FHR1_ASPOF (Uncharacterized protein (Fragment) n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FHR1_ASPOF)

HSP 1 Score: 202 bits (514), Expect = 1.900e-65
Identity = 100/109 (91.74%), Postives = 107/109 (98.17%), Query Frame = 0

Query:   13 HITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 121
            H+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMK+GRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    1 HVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKVGRIEDVTPIPTDSTRRKGGRRGRRL 109

[Close]

BLAST of mRNA_Ecto-sp13_S_contig10085.117.1 vs. uniprot
Match: A0A0A0LUH7_CUCSA (Uncharacterized protein n=2 Tax=fabids TaxID=91835 RepID=A0A0A0LUH7_CUCSA)

HSP 1 Score: 202 bits (514), Expect = 2.530e-65
Identity = 100/110 (90.91%), Postives = 108/110 (98.18%), Query Frame = 0

Query:   12 QHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 121
            QH+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDV+ RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GM+IGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    9 QHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 118

[Close]

BLAST of mRNA_Ecto-sp13_S_contig10085.117.1 vs. uniprot
Match: A0A7S2HU48_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HU48_9STRA)

HSP 1 Score: 204 bits (518), Expect = 3.280e-65
Identity = 101/109 (92.66%), Postives = 108/109 (99.08%), Query Frame = 0

Query:   13 HITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 121
            H+TDLSGRET+VRVTGGMKVKADRDEASPYAAMLAAQDVAA+CK++GITALHIKMRATGGNKTKTPGPGAQSALRALARAG+KIGRIEDVTPIP+DCTRRK GRRGRRL
Sbjct:   61 HVTDLSGRETIVRVTGGMKVKADRDEASPYAAMLAAQDVAAKCKDIGITALHIKMRATGGNKTKTPGPGAQSALRALARAGLKIGRIEDVTPIPSDCTRRKSGRRGRRL 169

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig10085.117.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig10085.117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FYS4_ECTSI	1.990e-69	100.00	40S ribosomal protein S14 n=3 Tax=Sar TaxID=269873...	[more]
A0A7J8M0W2_9ROSI	1.490e-66	89.47	Uncharacterized protein n=2 Tax=Pentapetalae TaxID...	[more]
A0A804R4M6_MAIZE	2.460e-66	90.99	Uncharacterized protein n=3 Tax=Panicoideae TaxID=...	[more]
A0A0D9W4P5_9ORYZ	6.270e-66	90.18	Uncharacterized protein n=1 Tax=Leersia perrieri T...	[more]
A0A2G5CAB9_AQUCA	1.150e-65	93.58	Uncharacterized protein n=2 Tax=Thalictroideae Tax...	[more]
A0A835H9E5_9MAGN	1.280e-65	93.58	Uncharacterized protein n=2 Tax=Coptis chinensis T...	[more]
K3YAJ9_SETIT	1.820e-65	93.58	Uncharacterized protein n=7 Tax=Magnoliopsida TaxI...	[more]
A0A5P1FHR1_ASPOF	1.900e-65	91.74	Uncharacterized protein (Fragment) n=1 Tax=Asparag...	[more]
A0A0A0LUH7_CUCSA	2.530e-65	90.91	Uncharacterized protein n=2 Tax=fabids TaxID=91835...	[more]
A0A7S2HU48_9STRA	3.280e-65	92.66	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001971	Ribosomal protein S11	PFAM	PF00411	Ribosomal_S11	coord: 12..117 e-value: 2.4E-38 score: 130.9
IPR001971	Ribosomal protein S11	PIRSF	PIRSF002131	RPS11p_RPS11a_RPS14e_RPS11o	coord: 8..118 e-value: 1.1E-26 score: 91.3
IPR001971	Ribosomal protein S11	PANTHER	PTHR11759	40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11	coord: 12..121
IPR001971	Ribosomal protein S11	HAMAP	MF_01310	Ribosomal_S11	coord: 1..118 score: 13.818
IPR036967	Ribosomal protein S11 superfamily	GENE3D	3.30.420.80		coord: 7..121 e-value: 4.0E-64 score: 216.8
None	No IPR available	PANTHER	PTHR11759:SF28		coord: 12..121
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 13..119
IPR018102	Ribosomal S11, conserved site	PROSITE	PS00054	RIBOSOMAL_S11	coord: 86..108

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig10085	contig	Ecto-sp13_S_contig10085:3984..5800 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig10085.117.1	mRNA_Ecto-sp13_S_contig10085.117.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig10085 3984..5800 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig10085.117.1 ID=prot_Ecto-sp13_S_contig10085.117.1|Name=mRNA_Ecto-sp13_S_contig10085.117.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=122bp
PSPLLDTYRNVQHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQD
VAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIE
DVTPIPTDCTRRKGGRRGRRL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001971	Ribosomal_S11
IPR036967	Ribosomal_S11_sf
IPR018102	Ribosomal_S11_CS