mRNA_Ecto-sp13_S_contig11234.1099.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11234.1099.1 vs. uniprot
Match: D7FYF7_ECTSI (DRP, dynamin-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF7_ECTSI) HSP 1 Score: 455 bits (1171), Expect = 6.470e-155 Identity = 245/289 (84.78%), Postives = 252/289 (87.20%), Query Frame = 1
Query: 1 NRLSGELGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLVLSLVAVPGTEPHAVIGGEADLSKGKIIGIDEISTEIERLTNELAGDGTTVSAKPIYLKIIRPSGPTLTLIDLPGITHNSPNGTQDIHTETVNLVKQFIENESMVILVVIPAMDDFANAEAIALAKKYDPDGRRTLGVVTKTDNIKAGCGIKAKLRMEPGHVQLSLGFIAVVNRTPIEVEEDTPAEEVRARERQFFQTYSEMVGLEKEYWGFDTLVGRIVEIQAERV 867
NRLSGELGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLVLSLVAVPG EPHAVIGG+ADLSKGKIIGIDEIST+IERLTNELAGDGT VSAKPIYLKIIRPSGPTLTLIDLP ITHNSP+GTQDIHTETVNLVK+FIEN++MVILVVIPAMDDFANAEAIALAKKYDPDGRRTLGVVTKTDNIK VEEDTPAEEVRARERQFFQT SEM G+EKEYWGFDTLVGRIVEIQAERV
Sbjct: 13 NRLSGELGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLVLSLVAVPGAEPHAVIGGQADLSKGKIIGIDEISTDIERLTNELAGDGTAVSAKPIYLKIIRPSGPTLTLIDLPDITHNSPDGTQDIHTETVNLVKKFIENDNMVILVVIPAMDDFANAEAIALAKKYDPDGRRTLGVVTKTDNIK--------------------------------VEEDTPAEEVRARERQFFQTNSEMAGIEKEYWGFDTLVGRIVEIQAERV 269
BLAST of mRNA_Ecto-sp13_S_contig11234.1099.1 vs. uniprot
Match: A0A813LGD8_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LGD8_POLGL) HSP 1 Score: 222 bits (566), Expect = 3.980e-63 Identity = 123/291 (42.27%), Postives = 186/291 (63.92%), Query Frame = 1
Query: 7 LSGELGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLVLSLVAVPGT-EPHAVIGGEADLSKGKIIGIDEISTEIERLTNELAGDGTTVSAKPIYLKIIRPSGPTLTLIDLPGITHNSPNGTQDIHTETVNLVKQFIENESMVILVVIPAMDDFANAEAIALAKKYDPDGRRTLGVVTKTDNI---KAGCGIKAKLRMEPGHVQLSLGFIAVVNRTPIEVEEDTPAEEVRARERQFFQTYSEMVGLEKEYWGFDTLVGRIVEIQAERV 867
LS +LG LE++R + Q ++ +PGVVV G QSAGKSS+LE + G++ PR QN TR+P +L+++ P EP+A + ++ + + E+ +I LT + A T +S K +Y++++R GP L+LIDLPG+THN+ DIH TV+LV++++ +E +VIL VIPAM DF NAE I LA+KYDP+G+RTLGVVTK D+ +A + L VQL LGF VVNR+ ++++ +++ +E+Q F+T + GL ++WG L+ +I IQA RV
Sbjct: 121 LSKKLGLLERVRHVCQA-VQIALPGVVVVGEQSAGKSSLLENISGIQFPRAQNTCTRMPCILTMLTDPSILEPYAKVSMDSSFEGAEQCAVGEVEEKIRALTAQHATGDTFISRKALYVRVVRKDGPQLSLIDLPGVTHNADK-MADIHEVTVSLVEEYVRHEEVVILCVIPAMSDFGNAEVIKLARKYDPEGKRTLGVVTKCDDAARAEASDVVDKTLMRRDSDVQLKLGFHCVVNRSQKNIDDNMARKDLWVKEQQLFETSERLRGLPSDHWGTLRLMEKIARIQASRV 409
BLAST of mRNA_Ecto-sp13_S_contig11234.1099.1 vs. uniprot
Match: A0A815G6I8_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815G6I8_9BILA) HSP 1 Score: 208 bits (530), Expect = 9.430e-59 Identity = 121/283 (42.76%), Postives = 182/283 (64.31%), Query Frame = 1
Query: 19 LGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLVLSLVAVPGTEPHAVIGGEADLSKGKIIGIDEISTEIERLTNELAGDGTTVSAKPIYLKIIRPSGPTLTLIDLPGITHNS-PNGTQDIHTETVNLVKQFIENESMVILVVIPAMDDFANAEAIALAKKYDPDGRRTLGVVTKTDNIKAGCGIKAKLRMEPGHVQLSLGFIAVVNRTPIEVEEDTPAEEVRARERQFFQ-TYSEMVGLEKEYWGFDTLVGRIVEIQAE 861
L AL+ +R +L N E++ +P +VVAG QS GKSSVLEAL G++LPR QNI TR PL L L +A I + + + KI +D+IS ++RLT LAGDG VS+ PIYL + + + P LTLIDLPGIT N P ++DI+ + + L+ ++I+ E+ ++L VIPA DF +E++ ++K YDP+G+R L V+K D G G K + + PG ++L G +AV+NR+P E+EE+ EE++ RE+ FF+ + + +E G D LV ++ +IQ +
Sbjct: 38 LDALDLMREIL-NEEKINLPEIVVAGDQSVGKSSVLEALSGIQLPRAQNICTRCPLELRLKNSMNDAEYATIRCKGE-EEEKITDLDDISQYVKRLTQTLAGDGVNVSSDPIYLTVYKQNIPDLTLIDLPGITRNPLPGQSKDIYKQIITLIDKYIQPETAIVLHVIPASVDFTTSESVKISKNYDPEGKRQLIAVSKIDKFDKGIGEKLQGK-GPGSMKLEFGCVAVLNRSPEEIEEEISFEEMKQREKAFFKKNHHAFHQVPEELLGSDQLVKKLADIQQD 317
BLAST of mRNA_Ecto-sp13_S_contig11234.1099.1 vs. uniprot
Match: A0A812V0V8_9DINO (DRP4C protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812V0V8_9DINO) HSP 1 Score: 198 bits (504), Expect = 1.880e-57 Identity = 114/291 (39.18%), Postives = 177/291 (60.82%), Query Frame = 1
Query: 7 LSGELGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLVLSLVAVPGT-EPHAVIGGEADLSKGKIIGIDEISTEIERLTNELAGDGTTVSAKPIYLKIIRPSGPTLTLIDLPGITHNSPNGTQDIHTETVNLVKQFIENESMVILVVIPAMDDFANAEAIALAKKYDPDGRRTLGVVTKTD---NIKAGCGIKAKLRMEPGHVQLSLGFIAVVNRTPIEVEEDTPAEEVRARERQFFQTYSEMVGLEKEYWGFDTLVGRIVEIQAERV 867
+S +LG +E +R + Q ++ +PGVVV G QSAGKSS+LE + G++ PR QN TR+P VL+++ P E A++ ++ + K + ++ I++LT++ +S + +Y++++R GP L+LIDLPG+THN+ +IH TV+LVK++IE E MVIL VIPAM DF NAE + LA++YDP+G RTLGVVTK D N +A ++ V+L+ GF VVNR+ ++E E++ +E + F + L WG L+ ++ +IQ RV
Sbjct: 24 VSKKLGLMESVRHVCQA-VQIPLPGVVVVGEQSAGKSSLLENISGIQFPRAQNTCTRMPCVLTMLTDPTVNESFALVSMDSSFTDAKRCAVADVEGRIKQLTDQHTTGAAFISREALYIRVVRRDGPQLSLIDLPGVTHNAEK-MSNIHEVTVSLVKEYIEPEEMVILCVIPAMSDFGNAEVVKLAREYDPEGIRTLGVVTKCDDAANAEASDIVEKVTMSRDSDVRLAFGFHCVVNRSQKNIDEGMSREDLWQKEEKTFTASERLRKLPASNWGTLRLMEKVAKIQEARV 312
BLAST of mRNA_Ecto-sp13_S_contig11234.1099.1 vs. uniprot
Match: A0A821VT27_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821VT27_9BILA) HSP 1 Score: 201 bits (512), Expect = 1.820e-56 Identity = 125/288 (43.40%), Postives = 181/288 (62.85%), Query Frame = 1
Query: 19 LGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLVLSLVAVPGTEPHAVIGGEADLSKGKII-GIDEISTEIERLTNELAGDGTTVSAKPIYLKIIRPSGP-TLTLIDLPGITHNS-PNGTQDIHTETVNLVKQFIENESMVILVVIPAMDDFANAEAIALAKKYDPDGRRTLGVVTKTDNIKAGCGIKAKLRME-PGHVQLSLGFIAVVNRTPIEVEEDTPAEEVRARERQFFQTYSEMV-GLEKEYWGFDTLVGRIVEIQAERV 867
L A++++R +LQ N+ + +P +VV G QS GKSSVLEA+ G++LPR QNI TR PL L + G E + + + K I +++I+ E+ RLTN++AG+GT VS+ PIYL + + + P LTLIDLPGIT N P +DIH + + L+ ++IE + V+L VIP+ DF+ +E+ LAK++DPD R L V+K D K GI KL E PG ++L LG +AV+NR E++ + EE++ RERQFF + E L EY G D LV ++ IQ R+
Sbjct: 15 LSAVDRMREILQGNQ-ICLPEIVVVGDQSVGKSSVLEAISGIQLPRAQNICTRCPLELRMKVTTGDEYAIIHNSQTPVDAMKTIYDMEDIADEVIRLTNDIAGNGTNVSSHPIYLTVYKRNIPYDLTLIDLPGITRNPLPGQAKDIHAQILTLINKYIEPSTAVVLHVIPSSVDFSTSESTKLAKEFDPDCERQLIAVSKID--KYDKGIAKKLVGEGPGSMKLQLGCVAVLNRNQDEIDSNVSFEEMKERERQFFIKHREAFQNLSDEYKGVDQLVKKLATIQHSRI 299
BLAST of mRNA_Ecto-sp13_S_contig11234.1099.1 vs. uniprot
Match: A0A812NNR0_9DINO (DRP4C protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812NNR0_9DINO) HSP 1 Score: 203 bits (517), Expect = 3.050e-56 Identity = 117/291 (40.21%), Postives = 185/291 (63.57%), Query Frame = 1
Query: 7 LSGELGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLVLSLVAVPGTE-PHAVIGGEADLSKGKIIGIDEISTEIERLTNELAGDGTTVSAKPIYLKIIRPSGPTLTLIDLPGITHNSPNGTQDIHTETVNLVKQFIENESMVILVVIPAMDDFANAEAIALAKKYDPDGRRTLGVVTKTDNI---KAGCGIKAKLRMEPGHVQLSLGFIAVVNRTPIEVEEDTPAEEVRARERQFFQTYSEMVGLEKEYWGFDTLVGRIVEIQAERV 867
LS +LG E++R + N E+ +PGVVV G QSAGKSS+LE++ G++ PR QN TR+P VL+++ P T+ P+A++ + + ++ +I++LT + A +S + ++++++R GP L+LIDLPG+THN+ ++IH TV LV+++I+ + MVIL VIPAM DF NAE + LAKKYDPDG RTLGVVTK D+ +A ++ L ++L LGF VVNR+ ++E ++ +E++ F + + L ++YWG L+ +I +IQ +RV
Sbjct: 16 LSKKLGLFERVRHVC-NAVEIPLPGVVVVGEQSAGKSSLLESISGIQFPRSQNTCTRMPCVLTMLTDPATDDPYALVSMDPSFEDAGPCPVMQVEGKIKQLTEKHATGDDFISKQALFVRVVRKEGPQLSLIDLPGVTHNA-ECMENIHEVTVALVEEYIKPDEMVILCVIPAMSDFGNAEVVKLAKKYDPDGIRTLGVVTKCDDAAHAEASDVVEKVLMRRETDMRLQLGFHCVVNRSQKNIDEGMSRVDLWNKEKKIFSS-ERLRSLPEDYWGTRRLMEKIAKIQEDRV 303
BLAST of mRNA_Ecto-sp13_S_contig11234.1099.1 vs. uniprot
Match: A0A817FC83_9BILA (Hypothetical protein n=12 Tax=Rotaria TaxID=231623 RepID=A0A817FC83_9BILA) HSP 1 Score: 200 bits (508), Expect = 1.860e-55 Identity = 124/290 (42.76%), Postives = 179/290 (61.72%), Query Frame = 1
Query: 10 SGELGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLVLSLVAVPGTEPHAVIGGEADLSKGKII-GIDEISTEIERLTNELAGDGTTVSAKPIYLKII-RPSGPTLTLIDLPGITHNS-PNGTQDIHTETVNLVKQFIENESMVILVVIPAMDDFANAEAIALAKKYDPDGRRTLGVVTKTDNIKAGCGIKAKLRMEPGHVQLSLGFIAVVNRTPIEVEEDTPAEEVRARERQFFQTYSEMVG-LEKEYWGFDTLVGRIVEIQAERV 867
SG L ++++R +L +NE++ +P +VV G QS GKSSVLEA+ G++LPR QNI TR PL L + + TE + + ++ + + ++EIS + RLT E+AG+GT VS+ PIYL + R LTLIDLPGIT N P +DIH + +NL+ ++IE + V+L VIPA DFA +E++ LAK+YDP R L TK D G K L PG +QL LG IAV+NR E++++ EE++ RE +FF + E L E+ G D LV ++ IQ +R+
Sbjct: 12 SGLLSTVDRMREIL-HNEKITLPEIVVVGDQSVGKSSVLEAISGIQLPRAQNICTRCPLELRMKSTIATEYAVIRSSKCSENEAETLYDMNEISNVVTRLTKEIAGEGTNVSSTPIYLTVYKRNMAYDLTLIDLPGITRNPLPGQPKDIHAQILNLINKYIEPSTAVVLHVIPASVDFATSESMKLAKEYDPQCLRQLITATKIDKYDKGIAEKL-LGRGPGAMQLKLGCIAVLNRNQDEIDQNISFEEMKKREAEFFIKHHEAFQYLPDEFKGIDQLVKKLAIIQQDRI 299
BLAST of mRNA_Ecto-sp13_S_contig11234.1099.1 vs. uniprot
Match: A0A819GPP9_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A819GPP9_9BILA) HSP 1 Score: 200 bits (508), Expect = 1.860e-55 Identity = 124/290 (42.76%), Postives = 179/290 (61.72%), Query Frame = 1
Query: 10 SGELGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLVLSLVAVPGTEPHAVIGGEADLSKGKII-GIDEISTEIERLTNELAGDGTTVSAKPIYLKII-RPSGPTLTLIDLPGITHNS-PNGTQDIHTETVNLVKQFIENESMVILVVIPAMDDFANAEAIALAKKYDPDGRRTLGVVTKTDNIKAGCGIKAKLRMEPGHVQLSLGFIAVVNRTPIEVEEDTPAEEVRARERQFFQTYSEMVG-LEKEYWGFDTLVGRIVEIQAERV 867
SG L ++++R +L +NE++ +P +VV G QS GKSSVLEA+ G++LPR QNI TR PL L + + TE + + ++ + + ++EIS + RLT E+AG+GT VS+ PIYL + R LTLIDLPGIT N P +DIH + +NL+ ++IE + V+L VIPA DFA +E++ LAK+YDP R L TK D G K L PG +QL LG IAV+NR E++++ EE++ RE +FF + E L E+ G D LV ++ IQ +R+
Sbjct: 12 SGLLSTVDRMREIL-HNEKITLPEIVVVGDQSVGKSSVLEAISGIQLPRAQNICTRCPLELRMKSTIATEYAVIRSSKCSENEAETLYDMNEISNVVTRLTKEIAGEGTNVSSTPIYLTVYKRNMAYDLTLIDLPGITRNPLPGQPKDIHAQILNLINKYIEPSTAVVLHVIPASVDFATSESMKLAKEYDPQCLRQLITATKIDKYDKGIAEKL-LGRGPGAMQLKLGCIAVLNRNQDEIDQNISFEEMKKREAEFFIKHHEAFQYLPDEFKGIDQLVKKLAIIQQDRI 299
BLAST of mRNA_Ecto-sp13_S_contig11234.1099.1 vs. uniprot
Match: A0A820W219_9BILA (Hypothetical protein n=8 Tax=Rotaria TaxID=231623 RepID=A0A820W219_9BILA) HSP 1 Score: 198 bits (504), Expect = 7.060e-55 Identity = 123/290 (42.41%), Postives = 178/290 (61.38%), Query Frame = 1
Query: 10 SGELGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLVLSLVAVPGTEPHAVIGGEADLSKGKIIG-IDEISTEIERLTNELAGDGTTVSAKPIYLKIIRPSGP-TLTLIDLPGITHNS-PNGTQDIHTETVNLVKQFIENESMVILVVIPAMDDFANAEAIALAKKYDPDGRRTLGVVTKTDNIKAGCGIKAKLRMEPGHVQLSLGFIAVVNRTPIEVEEDTPAEEVRARERQFFQTYSEMVG-LEKEYWGFDTLVGRIVEIQAERV 867
SG L A++++R +L +NE++ +P ++V G QS GKSSVLEA+ G++LPR QNI TR PL L + + E + + + + ++EIS + RLT E+AG+GT VS+ PIYL + + P LTLIDLPGIT N P +DIH + +NL+ ++IE + V+L VIPA DFA +E++ LAK++DP R L V+K D G K L PG +QL LG IAV+NR E++E+ EE++ RE FF + E L E+ G D LV ++ IQ +R+
Sbjct: 12 SGLLSAVDRMREIL-HNEKITLPEIIVVGDQSVGKSSVLEAISGIQLPRAQNICTRCPLELRMKSTANIEYAIIRNSKRSEDAAETLNDMNEISNAVTRLTKEIAGEGTNVSSTPIYLTVYKRHMPYDLTLIDLPGITRNPLPGQPKDIHAQILNLINKYIEPVTAVVLHVIPASVDFATSESMKLAKEFDPQCLRQLIAVSKIDKYDKGIAEKL-LGRGPGAMQLKLGCIAVLNRNQDEIDENISFEEMKKREADFFLKHHEAFQYLPDEFKGIDQLVKKLAIIQQDRI 299
BLAST of mRNA_Ecto-sp13_S_contig11234.1099.1 vs. uniprot
Match: A0A812KZ97_9DINO (DRP4C protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812KZ97_9DINO) HSP 1 Score: 201 bits (510), Expect = 1.020e-54 Identity = 116/291 (39.86%), Postives = 177/291 (60.82%), Query Frame = 1
Query: 7 LSGELGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLVLSLVAVPG-TEPHAVIGGEADLSKGKIIGIDEISTEIERLTNELAGDGTTVSAKPIYLKIIRPSGPTLTLIDLPGITHNSPNGTQDIHTETVNLVKQFIENESMVILVVIPAMDDFANAEAIALAKKYDPDGRRTLGVVTKTD---NIKAGCGIKAKLRMEPGHVQLSLGFIAVVNRTPIEVEEDTPAEEVRARERQFFQTYSEMVGLEKEYWGFDTLVGRIVEIQAERV 867
+S +LG E +R + Q ++ +PGVVV G QSAGKSS+LE + G++ PR QN TR+P +L+++ P +E +A++ ++ + + ++ +I+RLT A +S + +Y++++R GP L+LIDLPG+THN+ +IH TV+LVK++IE E MVIL VIPAM DF NAE + LA++YDPDG RTLGVVTK D N +A ++ V+L+ GF VVNR+ ++E E++ +E Q F + L WG L+ ++ +IQ RV
Sbjct: 344 VSKKLGLFESVRHVCQA-VQIPLPGVVVVGEQSAGKSSLLENISGIQFPRAQNTCTRMPCILTMLTDPTVSESYALVSMDSSFGDAQQCAVPDVEGQIKRLTEMHATGEAFISRQALYVRVVRRDGPQLSLIDLPGVTHNAEK-MSNIHEVTVDLVKEYIEPEEMVILCVIPAMSDFGNAEVVKLAREYDPDGIRTLGVVTKCDDAANAEASDIVEKVTMARDSDVRLAFGFHCVVNRSQKNIDEGMSREDLWKKEEQVFTRSDRLRRLPLSNWGTLRLMEKVAKIQEARV 632 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11234.1099.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11234.1099.1 >prot_Ecto-sp13_S_contig11234.1099.1 ID=prot_Ecto-sp13_S_contig11234.1099.1|Name=mRNA_Ecto-sp13_S_contig11234.1099.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=289bp NRLSGELGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLback to top mRNA from alignment at Ecto-sp13_S_contig11234:3373..4239+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11234.1099.1 ID=mRNA_Ecto-sp13_S_contig11234.1099.1|Name=mRNA_Ecto-sp13_S_contig11234.1099.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=867bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11234:3373..4239+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11234:3373..4239+ >mRNA_Ecto-sp13_S_contig11234.1099.1 ID=mRNA_Ecto-sp13_S_contig11234.1099.1|Name=mRNA_Ecto-sp13_S_contig11234.1099.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=867bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11234:3373..4239+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |