mRNA_Ecto-sp13_S_contig1008.109.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1008.109.1
Unique NamemRNA_Ecto-sp13_S_contig1008.109.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: D7FU15_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU15_ECTSI)

HSP 1 Score: 529 bits (1363), Expect = 1.810e-189
Identity = 269/273 (98.53%), Postives = 271/273 (99.27%), Query Frame = 2
Query:   32 MAGGKSSHPECHFAASGVAAIINFPLWRAAAIGQSGFDRTTNMGSNFFQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAPADHGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVRAVEE 850
            MAGGKSSHPECHFAASGVAAIINFPLWRAAAIGQSGFD TTNMGSNFFQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAV+VKDYMERNLAPADHGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEG+GFAVRGMSKNLVAVAIPITVTIF TDVLVRAVEE
Sbjct:    1 MAGGKSSHPECHFAASGVAAIINFPLWRAAAIGQSGFDTTTNMGSNFFQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVSVKDYMERNLAPADHGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGSGFAVRGMSKNLVAVAIPITVTIFVTDVLVRAVEE 273          
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: A0A835YRL8_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRL8_9STRA)

HSP 1 Score: 345 bits (886), Expect = 1.510e-116
Identity = 182/274 (66.42%), Postives = 213/274 (77.74%), Query Frame = 2
Query:   38 GGKSSHPECHFAASGVAAIINFPLWRAAAIGQSGFDR--TTNMGS---NFFQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAPADHG-DRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVRA 841
            G KS H  CH  AS +AA++NFPLW+A+AIGQSGFD+  TT  G+    F QRY  AL+PPYKGV ATI GMTWARAFIFYGSD GK  LE  G  S+ + VA+PPL+ S+ VQL+N PIIRASIT+QNP  + S+V ++L  +Y+  G+  LWHGTSAGVMKTVPKYCVAV VKDYME  L P +     WG  WRSA+KSVAAGVAGAALTNP+DVLRNEMFKTDLGVR AL+KL  EEGA +A RGM+KNLVAV+IPI +TIF TDVL+RA
Sbjct:    5 GDKSQHFMCHLTASAMAAVVNFPLWKASAIGQSGFDKVLTTEGGAVPVTFLQRYAAALRPPYKGVTATIGGMTWARAFIFYGSDWGKLYLERRGVESKTICVALPPLLCSSTVQLVNQPIIRASITLQNPQCEHSTVPQALRHLYKTRGLSGLWHGTSAGVMKTVPKYCVAVAVKDYMEGVLDPPNPELGSWGAAWRSAKKSVAAGVAGAALTNPVDVLRNEMFKTDLGVRQALSKLIHEEGAQWATRGMTKNLVAVSIPIGLTIFFTDVLIRA 278          
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: A0A1Z5JEI3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEI3_FISSO)

HSP 1 Score: 281 bits (720), Expect = 1.270e-91
Identity = 151/272 (55.51%), Postives = 188/272 (69.12%), Query Frame = 2
Query:   38 GGKSSHPECHFAASGVAAIINFPLWRAAAIGQSGFDRTTNMGSNFFQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAP-ADHGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVRAVEE 850
            GG   +P  +  AS +AA IN+PLWRA+AIGQSGF   +         Y+ A  PPYKG  AT++GMTWARA IF+GSD GK +L ++G +    TV +PPLV STVVQ +NMP++RA+ITIQ+P SK  +V  +L  IY+  G   LWHGTSAGV+K+VPKYC AV VK +ME  L P  D  +R   LWRSA KS AAG+AGAALTNPLDV+RNEMFKT+L +   + KL RE G  F  RG+ KN+VAVAIP+  TIF TD LV   ++
Sbjct:    2 GGTKDYPREYLIASALAATINYPLWRASAIGQSGFVVESARIPALLSPYVHAFAPPYKGALATVLGMTWARAGIFWGSDYGKEQLMQMGMAESAATV-LPPLVVSTVVQCVNMPLVRATITIQDPQSKLPNVAAALRYIYQTHGWAGLWHGTSAGVLKSVPKYCTAVVVKGFMEDWLPPPTDPSER---LWRSAYKSAAAGIAGAALTNPLDVIRNEMFKTNLELTATVQKLWRELGVRFLARGLGKNMVAVAIPVACTIFFTDALVHRTQQ 269          
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: A0A7R9YDC2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDC2_9STRA)

HSP 1 Score: 276 bits (706), Expect = 3.030e-89
Identity = 148/266 (55.64%), Postives = 188/266 (70.68%), Query Frame = 2
Query:   41 GKSSHPECHFAASGVAAIINFPLWRAAAIGQSGFDRTTNMGSNFFQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAPADHGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVR 838
            G    P  +F AS VAA+INFPLW+A+AIGQSGF R    G+   Q Y+EALKPPYKGV   + GMTWARA IF+GSD G+++L+E  +   ++  AVPPL+ ST VQ+ N PIIRASIT+Q+P +   S    +  I R+ GV ALWHGTSAG+MKTVPKYC A+  KDY+E  L P+D G R G L RSA K+V AGVAGA +TNP DV+RNEMFKT+  +   + +L +EE   FA RG++KN+VAV+IP+  TIF TD+  R
Sbjct:   30 GSRKRPLPYFLASSVAAVINFPLWKASAIGQSGF-RVKARGNGALQLYIEALKPPYKGVGVVVFGMTWARAAIFFGSDWGRQRLKET-HVHDLLASAVPPLITSTFVQICNQPIIRASITLQDPSANHPSTWSVIRDICRRHGVAALWHGTSAGIMKTVPKYCCAILTKDYLEDKLPPSD-GTRQGDLQRSAVKAVIAGVAGAVITNPFDVIRNEMFKTNQSLVAVVRRLGKEEPQ-FATRGLTKNIVAVSIPVACTIFFTDLFSR 291          
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: A0A7S1UGC6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGC6_9STRA)

HSP 1 Score: 270 bits (689), Expect = 7.940e-87
Identity = 142/268 (52.99%), Postives = 191/268 (71.27%), Query Frame = 2
Query:   56 PECHFAASGVAAIINFPLWRAAAIGQSGFDRTTNMGS--NFFQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGY-SSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAPADHGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVRAVEE 850
            P  +  +S +AA++NFPLW+A+AIGQSGF   ++ G+       YLEALKPPYKGV   + GMTWARA IF+GSD G+++L+E     S ++  A+PPLV STVVQ+ N PIIRASIT+Q+P +++ +    + +I R+ GV ALWHGTSAG+MKTVPKYC A+  KDY+E  L  +D G R G L RSA K+V AG+AGA +TNP DV+RNEMFKT+  + + + +L REE   FA RG+ KN+VAV+IP+  TIF TD+   A+ +
Sbjct:   16 PLPYLLSSSLAAVVNFPLWKASAIGQSGFKVKSHGGAATTALNLYLEALKPPYKGVGVVVFGMTWARAAIFFGSDLGRQQLKERRLVRSELLASALPPLVTSTVVQVCNQPIIRASITLQDPQTQYDNTLAVMRSIARRHGVAALWHGTSAGIMKTVPKYCTAIMAKDYLEDRLPQSD-GTRAGALVRSATKAVLAGMAGAIITNPFDVVRNEMFKTNQSLTEVITRLYREE-PNFATRGLGKNVVAVSIPVACTIFFTDLFTSALYD 281          
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: A0A7S4KCS5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCS5_9STRA)

HSP 1 Score: 269 bits (688), Expect = 1.950e-86
Identity = 148/287 (51.57%), Postives = 191/287 (66.55%), Query Frame = 2
Query:   32 MAGGKSS--HPECHFAASGVAAIINFPLWRAAAIGQSGFDRTTNMGSNFFQRY-----------LEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEEL--GYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAPADHGD---RWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVR 838
            M GG  +  HP  +  AS ++A IN+PLWRA+A+GQSGF    +                    L A  PPY+G++ATI+GMTWARA IF+GSDRGK  L E   G    + TV +PPL  ST+VQ++N PI+RASIT+QNP++   ++R+SL  IY   G+G +WHGTSAG++KTVPKYC AV +KD ME  L P D          LWRSA KS AAG+AGAALTNPLDV+RNEMFKT+ G+R+ +  LR   G  F +RG+ KN+VAVAIP++ TIF TD L++
Sbjct:    1 MGGGSLAREHPWDYLGASALSATINYPLWRASAVGQSGFRVLASSVPGVLSGVVPHVPPSVAPLLYAFAPPYRGLSATILGMTWARAAIFWGSDRGKDLLRENFPGMHPGMSTV-LPPLAVSTMVQIVNQPIVRASITLQNPETDLRTIRQSLRFIYVNHGLGGMWHGTSAGILKTVPKYCTAVVIKDLMEEILPPVDTSSPSAERDALWRSAYKSSAAGLAGAALTNPLDVIRNEMFKTNHGLRETVRNLRESLGWRFMIRGIGKNMVAVAIPVSCTIFFTDALIQ 286          
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: A0A7S1ZAZ4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAZ4_TRICV)

HSP 1 Score: 269 bits (687), Expect = 2.280e-86
Identity = 151/290 (52.07%), Postives = 192/290 (66.21%), Query Frame = 2
Query:   32 MAGGKSS--HPECHFAASGVAAIINFPLWRAAAIGQSGF--------DRTTNMGSNFFQRY---LEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRV-VTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAPADHGD---RWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVRAVEE 850
            M GG ++  HP  +  AS ++A IN+PLWRA+A+GQSGF           + + S         L A  PPY+G+ ATI+GMTWARA IF+GSDRGK  L          V   +PPLV ST+VQ++N P++RA+IT+QNP+S   +VR +L  IYR  G+  LWHGTSAGV+KTVPKYC AV VKD ME  L PAD          LWRSA KS AAG+AGAALTNPLDV+RNEMFKT+ G+ + +  LR+E G  F +RG+ KN+VAVAIP++ TIF TD L++  E 
Sbjct:    1 MGGGTTARDHPGEYLLASAMSASINYPLWRASAVGQSGFRVAAASVPPAVSGLVSAVHPSVAPILYAFAPPYRGLTATILGMTWARAAIFWGSDRGKEALRASAPGMHPSVHALLPPLVVSTLVQIVNQPLVRATITLQNPESDLLNVRSALRQIYRAHGLSGLWHGTSAGVLKTVPKYCTAVVVKDAMEDWLPPADPSSPTFESDKLWRSAYKSSAAGLAGAALTNPLDVIRNEMFKTNRGLVETVHNLRKELGWRFMIRGIGKNMVAVAIPVSCTIFFTDALIQVSER 290          
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: B7GD97_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GD97_PHATC)

HSP 1 Score: 268 bits (684), Expect = 5.000e-86
Identity = 151/285 (52.98%), Postives = 189/285 (66.32%), Query Frame = 2
Query:   32 MAGGKSS-----HPECHFAASGVAAIINFPLWRAAAIGQSGFD-RTTNMGSNFFQR----YLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAPAD------HGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVR 838
            MAGG  +     HP  +  AS +AA IN+PLWRA+A  QSGF     ++  +        Y+ A  PPYKG+ AT++GMTWARA IF+GSD G+  L   G++    TVA PPLV ST VQ INMP++R++IT+QNP S   +V  S+  IY   GV  LWHGTSAG++KTVPKY  AV VKD+ME+ L PAD      H DR   LWRSA KS  AGVAGAALTNPLDV+RNEMFKT+LG+   +  L+  EG  F  RG+ KNL+AVAIP+  TIF TD +++
Sbjct:    1 MAGGSGTGVAKEHPWEYLMASALAATINYPLWRASATAQSGFRIAPVHIAGHAIPSGVAPYVYAFLPPYKGMLATVLGMTWARAAIFWGSDYGRDILRTGGWNDGFATVA-PPLVVSTAVQCINMPLVRSTITLQNPQSHLRTVSASVQQIYNSHGVQGLWHGTSAGILKTVPKYITAVVVKDWMEQALPPADPLSKTYHQDR---LWRSAAKSAMAGVAGAALTNPLDVIRNEMFKTNLGLAATVRHLQETEGYAFVYRGLGKNLIAVAIPVGCTIFFTDAMIQ 281          
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: A0A7S3L599_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L599_9STRA)

HSP 1 Score: 260 bits (664), Expect = 7.090e-83
Identity = 141/274 (51.46%), Postives = 184/274 (67.15%), Query Frame = 2
Query:   53 HPECHFAASGVAAIINFPLWRAAAIGQSGF--DRTTNMGSNF---FQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNL-------APADHGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVR 838
            +P  +F A+ +AA IN+PLWRA+A+ QSGF        G         Y+ A  PPYKG+ AT+ GMTWARA IF+GSD GK  L++      VV   +PPL  ST VQ +NMP++RA+ITIQNP S   +V  +L  I +  G+ ALWHGTSAG++KTVPKYC AV VKD+M+ ++       +P  H DR   LWRSA KSV AGVAGAALTNPLDV+RN+MF+T+ G+R+ +  L  +EG  F  +G+ KN++AVAIP+  TIF TD LV+
Sbjct:    9 YPLEYFGAAALAAAINYPLWRASALAQSGFAVPEMVLAGQRLPSALAPYVFAFGPPYKGLVATVAGMTWARAAIFWGSDAGKAWLKQYETCPDVVATLLPPLAVSTAVQCVNMPLVRATITIQNPSSTLPTVPAALRHIAQHHGLPALWHGTSAGILKTVPKYCTAVVVKDFMDEHVLEPVDPTSPTAHTDR---LWRSATKSVVAGVAGAALTNPLDVIRNKMFQTNQGLRETVQVLYEKEGWAFLHKGLGKNMIAVAIPVACTIFFTDSLVQ 279          
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Match: A0A7S3PVJ4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVJ4_9STRA)

HSP 1 Score: 261 bits (666), Expect = 1.170e-82
Identity = 152/332 (45.78%), Postives = 194/332 (58.43%), Query Frame = 2
Query:   32 MAGGKSS--HPECHFAASGVAAIINFPLWRAAAIGQSGFDRTTN----------MGSNF---------------------------FQRYLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEE--------LGYSSRV---VTVAVPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGALWHGTSAGVMKTVPKYCVAVTVKDYMERNLAPADHGD---------RWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNLVAVAIPITVTIFATDVLVRAVEE 850
            M GG  +  HP  +  AS ++A+IN+PLWRA+A+GQSGF  T            M +N                             + YL +  PPYKG+ ATI GMTWARA IFYGSDRGK  L++        LG    +   V    PPLV S +VQ +N P++RASIT+QNP S+  ++RESL  IYR  G+  LWHGT+AG++KTVPKYC A+ VKDYME  L                +  T+ RSA KS  AG+AGA LTNP+DV+RNEMFKT+L + D +AKLR E G  F  RG+ KNLVAV+IP+  TIF TD+ ++  EE
Sbjct:    1 MGGGSKAKDHPLAYLGASSISALINYPLWRASAMGQSGFRVTPEILVDGMNIKPMSTNLKTIGIHLNPKHVQQQYIKPLVEAIPSTIRPYLHSFTPPYKGMVATIAGMTWARAAIFYGSDRGKDYLQQHQSTYVPSLGRDVVLPLSVITLTPPLVTSIMVQCVNQPVVRASITLQNPSSEMKNIRESLKYIYRNFGIKGLWHGTNAGILKTVPKYCTAIIVKDYMEEVLPKISESSSSSSSPEEYKRNTMIRSACKSATAGIAGAILTNPVDVIRNEMFKTNLSLIDTVAKLRGEMGWNFCTRGIGKNLVAVSIPVASTIFFTDLFIQMSEE 332          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1008.109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU15_ECTSI1.810e-18998.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YRL8_9STRA1.510e-11666.42Mitochondrial carrier domain-containing protein n=... [more]
A0A1Z5JEI3_FISSO1.270e-9155.51Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7R9YDC2_9STRA3.030e-8955.64Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1UGC6_9STRA7.940e-8752.99Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S4KCS5_9STRA1.950e-8651.57Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1ZAZ4_TRICV2.280e-8652.07Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
B7GD97_PHATC5.000e-8652.98Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3L599_9STRA7.090e-8351.46Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S3PVJ4_9STRA1.170e-8245.78Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1008contigEcto-sp13_S_contig1008:9805..13201 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score530.0
Seed ortholog evalue6.5e-148
Seed eggNOG ortholog2880.D7FU15
Model size866
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Mitochondrial carrier protein
EggNOG OGs2C9EI@1,2RYD4@2759
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-27_001070.1
Cds size822
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1008.109.1prot_Ecto-sp13_S_contig1008.109.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1008 9836..13188 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462506.113699-UTR-Ecto-sp13_S_contig1008:9804..98351681462506.113699-UTR-Ecto-sp13_S_contig1008:9804..9835Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1008 9805..9835 +
1681462506.1877275-UTR-Ecto-sp13_S_contig1008:13188..132011681462506.1877275-UTR-Ecto-sp13_S_contig1008:13188..13201Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1008 13189..13201 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462506.1240838-CDS-Ecto-sp13_S_contig1008:9835..99841681462506.1240838-CDS-Ecto-sp13_S_contig1008:9835..9984Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1008 9836..9984 +
1681462506.1349444-CDS-Ecto-sp13_S_contig1008:10515..105701681462506.1349444-CDS-Ecto-sp13_S_contig1008:10515..10570Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1008 10516..10570 +
1681462506.1460025-CDS-Ecto-sp13_S_contig1008:10742..109001681462506.1460025-CDS-Ecto-sp13_S_contig1008:10742..10900Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1008 10743..10900 +
1681462506.1553292-CDS-Ecto-sp13_S_contig1008:11583..115961681462506.1553292-CDS-Ecto-sp13_S_contig1008:11583..11596Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1008 11584..11596 +
1681462506.1648014-CDS-Ecto-sp13_S_contig1008:12382..125231681462506.1648014-CDS-Ecto-sp13_S_contig1008:12382..12523Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1008 12383..12523 +
1681462506.175629-CDS-Ecto-sp13_S_contig1008:12882..131881681462506.175629-CDS-Ecto-sp13_S_contig1008:12882..13188Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1008 12883..13188 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1008.109.1

>prot_Ecto-sp13_S_contig1008.109.1 ID=prot_Ecto-sp13_S_contig1008.109.1|Name=mRNA_Ecto-sp13_S_contig1008.109.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=274bp
MAGGKSSHPECHFAASGVAAIINFPLWRAAAIGQSGFDRTTNMGSNFFQR
YLEALKPPYKGVAATIIGMTWARAFIFYGSDRGKRKLEELGYSSRVVTVA
VPPLVFSTVVQLINMPIIRASITIQNPDSKFSSVRESLAAIYRKGGVGAL
WHGTSAGVMKTVPKYCVAVTVKDYMERNLAPADHGDRWGTLWRSAQKSVA
AGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGAGFAVRGMSKNL
VAVAIPITVTIFATDVLVRAVEE*
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mRNA from alignment at Ecto-sp13_S_contig1008:9805..13201+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1008.109.1 ID=mRNA_Ecto-sp13_S_contig1008.109.1|Name=mRNA_Ecto-sp13_S_contig1008.109.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3397bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1008:9805..13201+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCCCACACAGGACACAGATACCTTGGGGGCCATGGCTGGCGGGAAGAGCT CCCACCCAGAATGCCACTTCGCGGCATCTGGCGTGGCTGCGATAATCAAT TTCCCTCTGTGGAGAGCTGCAGCAATCGGCCAGAGCGGGTTTGACAGAAC CACTAACATGGGAAGTAATTTCTTTCAAAGGTGCGGTGGTACTTCGAGGC AGCATTCGATAGACCTGCACTCCTGCTGTTGTGTGCCAGCAGGCGGCAGC ACACCAGTTGTGCGCGAGTCCTCTGTGTGCATGATATTGGATTTTATTGG TGCAAATACCTATGCACTCTAGCGTGCATGGTAGAACGTGGAACTTACGA ACTTACGTCCTCTGTACACAGCAGCAGCGCAGCATCGGTGGATTGATCGG TTGGCTTCAAACTTGCCTGCGGAGGGTATGTACGTCAGCAGGCCCAGCAG CCTTGCGGTTACAGCAGTGGGGTCCTTTCTGGACCGCTTAATTCTAGGTA GATACAATCCACCTCTGGCCACCGCAGCGCGAGTGGTGTCCACTAACTCT GCAAAAGGAGTAACGTCGAACTTCCGAGAGTTTTTAACTCCTCCCGTCCG TAACGCAACCTCGCTGCTGTTGCAGATCCAACAACACCGCCATTTGTTTG TTTGTGTCCCCTGAACCTACCTTGAATCGTTTCCCTCGGAATATATTGCA CACTACTCCAGGTATTTGGAAGCTCTGAAACCACCGTACAAAGGGGTTGC AGCGACAATAATTGGGGTAAGCACTTGGGAGTAAATCTGTTCAGACCGCC TCGTTTCACTTGTTCTGTGTATTGAACTGCGAAATGCAGCAGTGCACCCA CATTGCAACCCCTCCAAGCCTCTCTTGTTGATTGATCCCTTTAAACAAAC TTGATGTTTCCTTGCTCTCCATGCGTCTTCGCACCCAGATGACGTGGGCG CGCGCCTTCATCTTCTACGGAAGCGATCGAGGCAAGCGCAAGCTGGAGGA GCTAGGGTACTCAAGCCGGGTGGTGACGGTGGCGGTGCCGCCTCTCGTCT TCTCCACCGTGGTTCAGTTGATAAACATGCCCATCATCCGAGCAAGGTGT GCTAGTGCTAAGAGAGACACGCGAGACTACAGCAGTCCAGTCGTGATTGT TAACGTTTTCGCACAACCGTGATTGGCGAGGAAGGAATCAGCAAGTCGTG CTTTGGTAGACGATATGGGGGCTCGACAAGGAAGTCAATTGCCGCAATGC TGTTTCGAACCAAGCACACGACTGTTTAGGCACGTGGTGGAAACCCAGGC ATTCCACGGAGTTAAATTGTCACTGCCATGAGGGACGATGAAGGAGTTGG GACCTGTACTGCTGTAGGCTTGCTCATCACTCATCACCACCGAGAAGGAA GGGTGCAGCTGAAACACTCTGGCCGTTACGTTTATCGCTGTCTCTGCGGT TTCCGGTCACATAGAGAAAGCACGAACCGGCAAGGAGGGGCTAAGCAAGA AGTCGTCTTGCGCCGTTTTTTGTCATGAACTGTGCGCCGAAGACAGACGA GCCAGTCTCGGTTTGTGGGCGAAGTGATGACTATTCAGCCCCTGAACAGC ATTACCACCACGGCCACCACCAACCAAAACGAGAGTAAGCCGTACGTTAT GCGGTGCCAAAGTCTTACCAGCCGCTACTCTCCTTCCTCCTCGCCCAACT CATGTCCGCTGTATTTGGATGCCGTCTAATCGCGGGTTGGCGTCACGCTT GCGGTTTGGGGGCGCCGGGAACGCATCAGCATTACCATCCAGGTGAGTTC TGTCGTGAGAATTCGACTTTCCCTAAGGTAACGTTTGCTTACGAGTTTCG AGGCCGAAACCCATCAATAACAGCAAAATTGCGTGACTGAACCGCCGGCT GTTTTTTCGGCGGTGGAAAATTATTGTGCTCGCAGCGCGCGAGGCCTTTT TTTTTGTCTCGTCGCGCAGGAGAACGGCTGCCTTCCGAGTCGAATCCCAG ACGAAAGCCGCTCTATCTGCTGTTGGCGGCACGCTCGTCATGAGAGTGGG ACCCAGGCAGTGGGCTCCTACTGCCTGGACCGAGCAGACCTTAACCTTTA CCTCGGCCGCCGCTCATCGCCCACTTTCCCGTAGTGCTGTAGCGAGCGTC CGTCCGTACACGTCTGCACGAGGGTGCGCACGAGATTGGCAGTGCCGCCA CCCGCGTTCGATTTCGTCTCGCCGTTCCGCATTTTCCCAGCGCGCACGCA GATTTCGAAAGCCACTGGTCGCAGAGTAGACACGTTGTTGAAAGCCTACC GTAGGCTGCATAAAGATACCACGCCGCCTGGACCAACATTTCATCTCAAT TTCTCCACGACGACGAGGACGCCAAAATCGAAAGATGCGTTGCCAGTGTT CTGGACGACACCGTTCAAACGCTATCACGGTTGTTGTTTTCGCTGCAAGA GCTTAGGAAATCAGTCCATGGGGTGTGGTTTGATATGCGACCGAAGGTGT GCCCAATTTGCCCCCGTGTTTTTGAACGTTTATATGTTTGCTTGGCGTAT ATGTGTTTGCTTGGCGTTCTTTTGTCAGAACCCGGACTCGAAGTTTTCCT CCGTGAGGGAGTCGCTGGCAGCCATTTACAGAAAAGGCGGAGTTGGTGCG CTGTGGCACGGCACTTCCGCAGGGGTTATGAAGACCGTGCCCAAGTATTG CGTCGCGGTAACCGTCAAGGTGAGTTTGATTCCGCCTGGAGGGCGCGTGG CACGAAGGTTTAGTGCCTCCGACGGTGTTCGTGTCGTTGGTTTAGGTTCT ACACCCCCCAAGTGATTTGCGCATGGGTCAAGCTGCAAAGCTCATCGGCT CTTGCGCCAACTGATCGGCCCTGCTTGGCGTGCGAGCTTCGGGGACGGCC CTCCGCAAGTTCTCTCCGAGTGAAGCACCGCGGCACACAACAGTGGGCAT CAAGAACATCTTCTTGTTCGAATCTTCTCCCCCTTGGCACCACCGCCGCT CCGTGATCGGGTTCCTCGACCCGTCCCTCTTTGCGCTCCCATTCAACCGC GTCCCGCCGCATTCATCGTGCTGTGCAGGACTACATGGAACGGAACCTCG CTCCCGCCGACCACGGGGACCGATGGGGGACGCTGTGGCGCTCCGCCCAG AAGTCGGTGGCCGCCGGGGTGGCCGGCGCCGCCCTCACCAACCCGCTGGA CGTGCTGAGAAACGAGATGTTCAAGACGGACCTGGGCGTGAGAGACGCGC TGGCCAAGCTCAGGCGTGAAGAGGGGGCGGGGTTCGCCGTTCGCGGGATG AGCAAGAACCTGGTGGCCGTCGCGATCCCGATCACGGTGACGATTTTCGC GACGGATGTCCTGGTGCGCGCGGTTGAGGAGTGAGGGGTGGGCGCGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1008:9805..13201+

>mRNA_Ecto-sp13_S_contig1008.109.1 ID=mRNA_Ecto-sp13_S_contig1008.109.1|Name=mRNA_Ecto-sp13_S_contig1008.109.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=822bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1008:9805..13201+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCTGGCGGGAAGAGCTCCCACCCAGAATGCCACTTCGCGGCATCTGG
CGTGGCTGCGATAATCAATTTCCCTCTGTGGAGAGCTGCAGCAATCGGCC
AGAGCGGGTTTGACAGAACCACTAACATGGGAAGTAATTTCTTTCAAAGG
TATTTGGAAGCTCTGAAACCACCGTACAAAGGGGTTGCAGCGACAATAAT
TGGGATGACGTGGGCGCGCGCCTTCATCTTCTACGGAAGCGATCGAGGCA
AGCGCAAGCTGGAGGAGCTAGGGTACTCAAGCCGGGTGGTGACGGTGGCG
GTGCCGCCTCTCGTCTTCTCCACCGTGGTTCAGTTGATAAACATGCCCAT
CATCCGAGCAAGCATTACCATCCAGAACCCGGACTCGAAGTTTTCCTCCG
TGAGGGAGTCGCTGGCAGCCATTTACAGAAAAGGCGGAGTTGGTGCGCTG
TGGCACGGCACTTCCGCAGGGGTTATGAAGACCGTGCCCAAGTATTGCGT
CGCGGTAACCGTCAAGGACTACATGGAACGGAACCTCGCTCCCGCCGACC
ACGGGGACCGATGGGGGACGCTGTGGCGCTCCGCCCAGAAGTCGGTGGCC
GCCGGGGTGGCCGGCGCCGCCCTCACCAACCCGCTGGACGTGCTGAGAAA
CGAGATGTTCAAGACGGACCTGGGCGTGAGAGACGCGCTGGCCAAGCTCA
GGCGTGAAGAGGGGGCGGGGTTCGCCGTTCGCGGGATGAGCAAGAACCTG
GTGGCCGTCGCGATCCCGATCACGGTGACGATTTTCGCGACGGATGTCCT
GGTGCGCGCGGTTGAGGAGTGA
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