mRNA_Ecto-sp13_S_contig11226.1089.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11226.1089.1 vs. uniprot
Match: D7G7L2_ECTSI (G-patch_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7L2_ECTSI) HSP 1 Score: 439 bits (1129), Expect = 1.430e-146 Identity = 354/378 (93.65%), Postives = 361/378 (95.50%), Query Frame = 1
Query: 1 QMKRPRKKKPGEKPRSSDAERLKIWEKKVQEERLRASRPSAAAQLAVMDVVELSEGREEGGSRRPRAMVLKTQGVPGLNKISVRLEDTGEKVLVDKATATRVSEDELARRPFSENKDRSSRSSGXXXXXXXXXXXXXXXXSGSVEREDVRRERRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIDRXXXXXXXXXXXXGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGGQQSGPPAWLRANIRVRVIHKSYGGGRAYLGKGRVVDVPRVGQATVRMDLGELVLEGVKERHLETVLPSRGGKVIVVRGTERGATGKLLAKNKEKETALVQVYEDLRAVTLSLDDVAEYTGMLDEDMEDVGY 1134
+MKRPR KKPGEKPRSSDAERLKIWEKKVQEERLRASRPSAAAQLAVMDVVELSEG E G RRPRAMVLKTQGVPGLNKISVR+EDTGEKVLVDK+TATRVSEDELARRPFSENKDRSSRSS XXXXXXXXXXXXXXXXSGSVERED RRERR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXGGR XXXXXXXXXXXXXXXXXXXXXXXXXXX +GGQQSGPPAWLRANIRVRVIHKSYGGGRAYLGKGRVVDVPR GQATVRMDLGELVLEGVKERHLETVLP+RGGKVIVVRG E+GATGKLLAKNKEKETALVQVYEDLRAVTLSLDDVAE+TGMLDEDMEDVGY
Sbjct: 295 EMKRPRTKKPGEKPRSSDAERLKIWEKKVQEERLRASRPSAAAQLAVMDVVELSEGGGERGRRRPRAMVLKTQGVPGLNKISVRMEDTGEKVLVDKSTATRVSEDELARRPFSENKDRSSRSSXXXXXXXXXXXXXXXXXSGSVEREDGRRERR--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGQQSGPPAWLRANIRVRVIHKSYGGGRAYLGKGRVVDVPRAGQATVRMDLGELVLEGVKERHLETVLPARGGKVIVVRGAEKGATGKLLAKNKEKETALVQVYEDLRAVTLSLDDVAEFTGMLDEDMEDVGY 670
BLAST of mRNA_Ecto-sp13_S_contig11226.1089.1 vs. uniprot
Match: A0A1E7FVK9_9STRA (KN17_SH3 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVK9_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.910e-26 Identity = 59/121 (48.76%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 760 AWLRANIRVRVIHKSYGGGRAYLGKGRVVDVPRVGQATVRMDLGELVLEGVKERHLETVLPSRGGKVIVVRGTERGATGKLLAKNKEKETALVQVYEDLRAVTLSLDDVAEYTGMLDEDME 1122
+WL NIRVRVI YGG Y KG VVDV R G AT++M G+++ V ERHLET LP GG I++ G +R + G+LL ++ +K +VQV+ED+ +T SLD++AE+ G LD+D+E
Sbjct: 3 SWLIPNIRVRVISSKYGGS-VYKEKGVVVDVTRRGVATLKMGNGQVI--NVAERHLETALPKAGGNSIILSGDQRHSKGRLLERDSKKNRGVVQVFEDMSVITTSLDEMAEWCGPLDDDLE 120
BLAST of mRNA_Ecto-sp13_S_contig11226.1089.1 vs. uniprot
Match: A0A7S3VCG7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VCG7_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.800e-22 Identity = 60/122 (49.18%), Postives = 83/122 (68.03%), Query Frame = 1
Query: 763 WLRANIRVRVIHKSYGGGRAYLGKGRVVDVPRVG-QATVRMDLGELVLEGVKERHLETVLPSRGGKVIVVRGTERGATGKLLAKNKEKETALVQVYEDLRAVTLSLDDVAEYTGMLDEDMED 1125
WL +NIR+RV+ K GR + KG VVDV R G +AT++M GE +LE + ER+LET LP GG VI++ G+ + GKLL ++ EK +VQ++ED+ TLSLDD+AEY G LD+ + D
Sbjct: 519 WLVSNIRIRVVTKKIAKGRQFKQKGIVVDVLRKGSEATLQMSNGE-ILERIPERYLETALPKVGGNVIILTGSNKFEKGKLLERDSEKGRGVVQLFEDMHVKTLSLDDIAEYCGPLDDALAD 639
BLAST of mRNA_Ecto-sp13_S_contig11226.1089.1 vs. uniprot
Match: A0A7S4ELZ5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ELZ5_9STRA) HSP 1 Score: 107 bits (267), Expect = 8.590e-22 Identity = 57/121 (47.11%), Postives = 80/121 (66.12%), Query Frame = 1
Query: 760 AWLRANIRVRVIHKSYGGGRAYLGKGRVVDVPRVGQATVRMDLGELVLEGVKERHLETVLPSRGGKVIVVRGTERGATGKLLAKNKEKETALVQVYEDLRAVTLSLDDVAEYTGMLDEDME 1122
+WL NIRVRV+ YG Y KG V+DV R G AT++M G+++ ERHLET LP GG I++ G +R + G+LL ++ +K +VQV+ED+ VT SLDD+AE+ G LD+D+E
Sbjct: 436 SWLIPNIRVRVVSSKYGRS-VYKEKGVVIDVTRKGVATLKMGSGQVI--SAPERHLETALPKAGGNAIILSGDQRFSKGQLLERDGKKNRGVVQVFEDMSIVTTSLDDMAEWCGPLDDDLE 553
BLAST of mRNA_Ecto-sp13_S_contig11226.1089.1 vs. uniprot
Match: A4RU75_OSTLU (KOW domain-containing protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4RU75_OSTLU) HSP 1 Score: 99.4 bits (246), Expect = 8.900e-22 Identity = 56/118 (47.46%), Postives = 76/118 (64.41%), Query Frame = 1
Query: 763 WLRANIRVRVIHKSYGGGRAYLGKGRVVDVPRVGQATVRMDLGELVLEGVKERHLETVLPSRGGKVIVVRGTERGATGKLLAKNKEKETALVQVYEDLRAVTLSLDDVAEYTGMLDED 1116
WL ANIRVRV+ KS+ G+ YL KG VVDV + ++++ +E V + LETV+P GG++ VV G RG GKLL KNK +TA +Q+ +D A L LD +AEY+G LDE+
Sbjct: 6 WLFANIRVRVVSKSFKRGQFYLMKGVVVDVLTPTECMLQLEENGTTIE-VSQSALETVVPKPGGRICVVSGKFRGRRGKLLEKNKSTDTASIQLSDDFEAHMLPLDAIAEYSGALDEE 122
BLAST of mRNA_Ecto-sp13_S_contig11226.1089.1 vs. uniprot
Match: A0A7S0D295_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D295_MICPS) HSP 1 Score: 102 bits (255), Expect = 1.480e-21 Identity = 57/115 (49.57%), Postives = 73/115 (63.48%), Query Frame = 1
Query: 757 PAWLRANIRVRVIHKSYGGGRAYLGKGRVVDVPRVGQATVRMDLGELVLEGVKERHLETVLPSRGGKVIVVRGTERGATGKLLAKNKEKETALVQVYEDLRAVTLSLDDVAEYTG 1101
PAWL+ N RVR++ KS+ GGR YL KG VVDV + V ++ VL GV +R LET LP RGG+V VV G ++G GKLL +K+ E A VQ+ ED +LD +AEY G
Sbjct: 148 PAWLQGNTRVRIVSKSFEGGRLYLKKGVVVDVLTPRECVVEINDSGEVLSGVPQRVLETALPKRGGRVAVVLGPKKGQRGKLL--DKKGEAASVQLSEDFTVQNFTLDQIAEYVG 260
BLAST of mRNA_Ecto-sp13_S_contig11226.1089.1 vs. uniprot
Match: A0A7S0NN85_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0NN85_MICPS) HSP 1 Score: 97.4 bits (241), Expect = 6.980e-21 Identity = 56/119 (47.06%), Postives = 77/119 (64.71%), Query Frame = 1
Query: 757 PAWLRANIRVRVIHKSYGGGRAYLGKGRVVDVPRVGQATVRMDLGELVLEGVKERHLETVLPSRGGKVIVVRGTERGATGKLLAKNKEKETALVQVYEDLRAVTLSLDDVAEYTGMLDE 1113
PAWL A+ RVR++ KS+ GG+ YL K VVDV ++++ GE VL V +R LET LP RGG V+V+ G RG G +L +K+ E A VQ+ E+L +SLD +AEYTG L++
Sbjct: 23 PAWLFASTRVRIVSKSFQGGKHYLKKASVVDVLTPRTCVLQLEGGE-VLTDVPQRALETALPKRGGAVVVLVGEHRGQRGTML--DKKGEVAAVQLSEELSVHKISLDHIAEYTGALED 138
BLAST of mRNA_Ecto-sp13_S_contig11226.1089.1 vs. uniprot
Match: A0A7S1D9L4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9L4_CYCTE) HSP 1 Score: 97.1 bits (240), Expect = 2.260e-20 Identity = 52/120 (43.33%), Postives = 79/120 (65.83%), Query Frame = 1
Query: 760 AWLRANIRVRVIHKSYGGGRAYLGKGRVVDVPRVGQATVRMDLGELVLEGVKERHLETVLPSRGGKVIVVRGTERGATGKLLAKNKEKETALVQVYEDLRAVTLSLDDVAEYTGMLDEDM 1119
+WL NIRVRV+ K G + + KG VVDV R AT+++ G+L L+ V E +LET LP GG +++ G + A GKLL +N + ++Q++ED+ ++LSLDD+AE+ G LD+D+
Sbjct: 51 SWLIPNIRVRVVTKKLG-SKYFKEKGVVVDVTRGPCATLQLSSGQL-LDRVPESYLETALPKVGGNAVILAGKSKLAKGKLLERNSDSGEGIIQIFEDMSVLSLSLDDLAEWVGPLDDDL 168
BLAST of mRNA_Ecto-sp13_S_contig11226.1089.1 vs. uniprot
Match: A0A7R9Y0J3_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y0J3_9VIRI) HSP 1 Score: 94.0 bits (232), Expect = 4.750e-19 Identity = 53/116 (45.69%), Postives = 72/116 (62.07%), Query Frame = 1
Query: 760 AWLRANIRVRVIHKSYGGGRAYLGKGRVVDVPRVGQATVRM--DLGELVLEGVKERHLETVLPSRGGKVIVVRGTERGATGKLLAKNKEKETALVQVYEDLRAVTLSLDDVAEYTG 1101
AWLR I VRV+ K G+ YL KG V+DV +AT+ M G+ V+ V +R LET LP RGG+VIVV+G RG +L+ ++ + A VQ+ +DL TL +D+VAEY G
Sbjct: 72 AWLRPGIVVRVVSKRLAEGKLYLQKGCVLDVTGPEEATLSMLSGNGDTVVHEVPQRSLETALPKRGGRVIVVKGEHRGEVAQLIERHSDSGEATVQLSDDLSMRTLMMDEVAEYRG 187
BLAST of mRNA_Ecto-sp13_S_contig11226.1089.1 vs. uniprot
Match: A0A803L9I6_CHEQI (G-patch domain-containing protein n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803L9I6_CHEQI) HSP 1 Score: 98.6 bits (244), Expect = 5.540e-19 Identity = 50/125 (40.00%), Postives = 78/125 (62.40%), Query Frame = 1
Query: 760 AWLRANIRVRVIHKSYGGGRAYLGKGRVVDVPRVGQATVRMDLGELVLEGVKERHLETVLPSRGGKVIVVRGTERGATGKLLAKNKEKETALVQVYEDLRAVTLSLDDVAEYTGMLDEDMEDVGY 1134
+WLR++IRVR++ KS+ GG+ YL KG V+D V + MD G +++GV++ LET LP RGG V+V+ G +G G L+ K+ E+ T +VQ + + + L+ +AE+ G D D+GY
Sbjct: 336 SWLRSHIRVRIVSKSFKGGKFYLKKGVVIDAAGVRTCDISMDDGREIVQGVEQEILETALPRRGGPVLVLFGNHKGTYGSLVEKDSERGTGVVQDADTHELIHVQLEQIAEFVG----DPGDIGY 456 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11226.1089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11226.1089.1 >prot_Ecto-sp13_S_contig11226.1089.1 ID=prot_Ecto-sp13_S_contig11226.1089.1|Name=mRNA_Ecto-sp13_S_contig11226.1089.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=378bp MKRPRKKKPGEKPRSSDAERLKIWEKKVQEERLRASRPSAAAQLAVMDVVback to top mRNA from alignment at Ecto-sp13_S_contig11226:236..5014+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11226.1089.1 ID=mRNA_Ecto-sp13_S_contig11226.1089.1|Name=mRNA_Ecto-sp13_S_contig11226.1089.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4779bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11226:236..5014+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11226:236..5014+ >mRNA_Ecto-sp13_S_contig11226.1089.1 ID=mRNA_Ecto-sp13_S_contig11226.1089.1|Name=mRNA_Ecto-sp13_S_contig11226.1089.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1134bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11226:236..5014+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |