prot_Ecto-sp13_S_contig1008.108.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1008.108.1
Unique Nameprot_Ecto-sp13_S_contig1008.108.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length231
Homology
BLAST of mRNA_Ecto-sp13_S_contig1008.108.1 vs. uniprot
Match: A0A6H5JG07_9PHAE (Rubredoxin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JG07_9PHAE)

HSP 1 Score: 372 bits (956), Expect = 4.090e-129
Identity = 208/230 (90.43%), Postives = 209/230 (90.87%), Query Frame = 0
Query:    1 MVSSTSVSLGLALLVGVPAGAFVQAPARCAVTQQAASRARGSTSTSPLCLLKQRPRPLVSSYTTLFSEGEDTSPAAASAEGSXXXXXXXXXXGDGAEVAVVEEKPLTEAELAQKAKMEEIERLRAKEKFTTVKTGDHECLQCGFVYKPENAGQGALPGTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLFAFFVLFLAGYALD 230
            MVSSTSVS GLALL GVPAGAFVQAPARC VTQQAASRARGS STSP CLLKQR RP VSSYTT+FSEGED           XXXXXXXXXX  GAEVAVVEEKPLTEAELAQKAKMEEIERLRAKEKFTTVKTGDHECLQCGFVYKPENAGQGALPGTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFG LFAFFVLFLAGYALD
Sbjct:    1 MVSSTSVSFGLALLAGVPAGAFVQAPARCTVTQQAASRARGSRSTSPPCLLKQRSRPPVSSYTTIFSEGEDXXXXXXXXXXXXXXXXXXXXXXXGAEVAVVEEKPLTEAELAQKAKMEEIERLRAKEKFTTVKTGDHECLQCGFVYKPENAGQGALPGTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGGLFAFFVLFLAGYALD 230          
BLAST of mRNA_Ecto-sp13_S_contig1008.108.1 vs. uniprot
Match: A0A6S9ELN9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ELN9_HETAK)

HSP 1 Score: 147 bits (370), Expect = 1.510e-40
Identity = 77/136 (56.62%), Postives = 89/136 (65.44%), Query Frame = 0
Query:   97 EVAVVEEKP--LTEAELAQKAKMEEIERLRAKEKFTTVKTGDHECLQCGFVYKPENAGQGALPGTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLFAFFVLFLAGYALD 230
            EV + EE P  LTE +  +  K  EI+RLR  EKF T  TG+ +C QC +VYKP+   +  LPGT F DLP+ + CP C APK  F A T TIAGFEDN  YGFG N MTG QKN LIFG L  FF LFL+GY LD
Sbjct:   71 EVTLEEEAPVELTEQQRKEAEKQAEIQRLRDAEKFITKMTGEFQCSQCNYVYKPDEGERNILPGTSFADLPTGYQCPECGAPKSFFDALTVTIAGFEDNQGYGFGTNSMTGDQKNTLIFGGLAFFFALFLSGYLLD 206          
BLAST of mRNA_Ecto-sp13_S_contig1008.108.1 vs. uniprot
Match: A0A7S0GMA1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GMA1_9EUKA)

HSP 1 Score: 136 bits (343), Expect = 3.620e-36
Identity = 68/120 (56.67%), Postives = 82/120 (68.33%), Query Frame = 0
Query:  113 QKAKMEEIERLRAKEKFTTVKTGDHECLQCGFVYKPENAGQGAL--PGTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLFAFFVLFLAGYALD 230
            Q+AK +EI RLRA EKF    TGD EC++C FVYK EN    +L   GT F+DLP  W+CPVC  PKDTF  Q K +AGF +N  YGFG N +T  QK+ LI+GSL AFF LFL GY ++
Sbjct:  115 QEAKAKEIARLRAAEKFFRKGTGDFECVECQFVYKAENGDPESLIAKGTAFEDLPEDWLCPVCGQPKDTFEEQGKIVAGFAENQGYGFGTNSLTEGQKSALIYGSLAAFFALFLLGYKMN 234          
BLAST of mRNA_Ecto-sp13_S_contig1008.108.1 vs. uniprot
Match: A0A2V3IE15_9FLOR (Rubredoxin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE15_9FLOR)

HSP 1 Score: 130 bits (327), Expect = 4.920e-34
Identity = 63/115 (54.78%), Postives = 78/115 (67.83%), Query Frame = 0
Query:  118 EEIERLRAKEKFTTVKTGDHECLQCGFVYKPENAGQ--GALPGTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLFAFFVLFLAGYALD 230
            EEIERLRA EKF TV  G +EC  CG+ Y+P+   +  G  PGT F+ LP+T+ CPVC+ PK  F ++ K IAGF DN +YGFG N MT  QKNLLIFG L    +L L+GY L+
Sbjct:   98 EEIERLRAAEKFITVDEGRYECPACGYTYEPKQGEKQAGIQPGTPFEQLPATYFCPVCRTPKSRFISKKKVIAGFADNQSYGFGTNSMTAGQKNLLIFGGLVFAALLLLSGYGLN 212          
BLAST of mRNA_Ecto-sp13_S_contig1008.108.1 vs. uniprot
Match: J7G1B9_9CRYP (Rubredoxin n=1 Tax=Chroomonas mesostigmatica CCMP1168 TaxID=1195612 RepID=J7G1B9_9CRYP)

HSP 1 Score: 126 bits (316), Expect = 1.440e-32
Identity = 63/120 (52.50%), Postives = 79/120 (65.83%), Query Frame = 0
Query:  113 QKAKMEEIERLRAKEKFTTVKTGDHECLQCGFVYKPENAGQ--GALPGTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLFAFFVLFLAGYALD 230
            +KA+ EEIERLRA EKF  +  G  EC  CG+VY+PE   +  G  PGT F DLPS + CP C++PK  F    K IAGF +N  YG G N +TG QKNL+IFG L + F+L L+GY L+
Sbjct:   78 EKARKEEIERLRAAEKFMEIDEGKFECQACGYVYEPEKGDRFAGIEPGTTFPDLPSDFYCPACRSPKTQFKNIKKVIAGFAENQQYGLGGNSLTGEQKNLVIFGILGSAFLLLLSGYLLE 197          
BLAST of mRNA_Ecto-sp13_S_contig1008.108.1 vs. uniprot
Match: M2XPL6_GALSU (Rubredoxin family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XPL6_GALSU)

HSP 1 Score: 121 bits (303), Expect = 2.910e-31
Identity = 66/136 (48.53%), Postives = 84/136 (61.76%), Query Frame = 0
Query:   98 VAVVEEKPLTEAELAQKAKM-EEIERLRAKEKFTTVKTGDHECLQCGFVYKPENAGQ--GALPGTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLFAFFVLFLAGYALD 230
            V   EE+ L+ +E  + AK  EE+ERLRA EKF     G   C  C +VY+P+      G  PGT F+DLP T+ CPVC++ KDTF  +   IAGF  N +YG G+N +T +QKN LIFG LF  FVL +AGY L 
Sbjct:   10 VTCKEEQRLSMSEEERLAKKREEVERLRAAEKFIRKDVGKFGCPVCEYVYEPDKGDSLAGIQPGTSFEDLPETFRCPVCRSSKDTFIPKQTVIAGFATNQSYGLGSNALTPAQKNALIFGGLFLLFVLLMAGYGLS 145          
BLAST of mRNA_Ecto-sp13_S_contig1008.108.1 vs. uniprot
Match: A0A8J4FYX4_9CHLO (Rubredoxin-like domain-containing protein (Fragment) n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4FYX4_9CHLO)

HSP 1 Score: 122 bits (306), Expect = 3.500e-31
Identity = 63/127 (49.61%), Postives = 79/127 (62.20%), Query Frame = 0
Query:  106 LTEAELAQKAKMEEIERLRAKEKFTTVKTGDHECLQCGFVYKPENAGQG--ALPGTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLFAFFVLFLAGYALD 230
            LTEAE     K  E E+LRA EKF  + +G   C  CG+ YKPE         PG  F  LP  ++CP+C APK  F ++ K +AGF +N  YG G N MT SQK+LLI+G+L  FF+LFLAGYAL+
Sbjct:   66 LTEAE----RKKAEAEKLRAAEKFMVIGSGSATCKGCGYEYKPEKGDPDFPVPPGVSFQALPDDYVCPICGAPKSKFESRMKVVAGFAENQKYGLGGNSMTESQKSLLIYGALAVFFILFLAGYALE 188          
BLAST of mRNA_Ecto-sp13_S_contig1008.108.1 vs. uniprot
Match: A0A2P6VL59_9CHLO (Rubredoxin n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VL59_9CHLO)

HSP 1 Score: 122 bits (305), Expect = 3.550e-31
Identity = 62/117 (52.99%), Postives = 73/117 (62.39%), Query Frame = 0
Query:  116 KMEEIERLRAKEKFTTVKTGDHECLQCGFVYKPENAGQG--ALPGTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLFAFFVLFLAGYALD 230
            K  E +RLRA EKF TV TG+  C  CG+ Y P+         PGTQF  LP+ W CPVC A K  F ++ + +AGF +N  YG G N MT   K+LLIFGSL  FFVLFLAGYAL 
Sbjct:   60 KKAEADRLRAAEKFMTVGTGEASCKGCGYEYSPKRGDPEYPVAPGTQFQQLPADWQCPVCGAEKKLFVSKQRQVAGFAENQGYGLGTNSMTEGDKSLLIFGSLAFFFVLFLAGYALP 176          
BLAST of mRNA_Ecto-sp13_S_contig1008.108.1 vs. uniprot
Match: A0A7S2RF64_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RF64_9STRA)

HSP 1 Score: 120 bits (302), Expect = 3.560e-31
Identity = 66/123 (53.66%), Postives = 78/123 (63.41%), Query Frame = 0
Query:  108 EAELAQKAKMEEIERLRAKEKFTTVKTGDHECLQCGFVYKPENAGQGALPGTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLFAFFVLFLAGYALD 230
            E EL ++ K  E +RLR  EKF    TG  EC  CG+VY        A  GTQF +LPS+W CP C + K  F  QT+T+AGFE+N  YGFG N MT  +KN LIFGSL AFFVLFL GY L+
Sbjct:   26 EEELTEQEK--ENQRLRDAEKFVVETTGRAECKTCGYVYDE------ATEGTQFVELPSSWRCPQCLSQKGFFEVQTRTLAGFEENLQYGFGTNTMTAGEKNNLIFGSLAAFFVLFLGGYLLE 140          
BLAST of mRNA_Ecto-sp13_S_contig1008.108.1 vs. uniprot
Match: I0Z237_COCSC (Rubredoxin-like protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z237_COCSC)

HSP 1 Score: 120 bits (301), Expect = 4.470e-31
Identity = 64/127 (50.39%), Postives = 78/127 (61.42%), Query Frame = 0
Query:  106 LTEAELAQKAKMEEIERLRAKEKFTTVKTGDHECLQCGFVYKPENAGQG--ALPGTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLFAFFVLFLAGYALD 230
            + E+E AQK    E +RLRA EKF  V TG+  C  CG+ Y P+N        PGT F  LP  W CP+C A K TF ++ K IAGF +N  YG G N +T  QK+LLIFGSL AFF LFL GY ++
Sbjct:   12 IPESEAAQKKA--EADRLRAAEKFMVVGTGEAICAGCGYEYLPKNGDPEYPITPGTPFTQLPDDWNCPICGADKVTFQSKAKEIAGFAENQRYGLGTNSLTSGQKSLLIFGSLIAFFFLFLGGYFIE 136          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1008.108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG07_9PHAE4.090e-12990.43Rubredoxin-like domain-containing protein n=2 Tax=... [more]
A0A6S9ELN9_HETAK1.510e-4056.62Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0GMA1_9EUKA3.620e-3656.67Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A2V3IE15_9FLOR4.920e-3454.78Rubredoxin n=1 Tax=Gracilariopsis chorda TaxID=448... [more]
J7G1B9_9CRYP1.440e-3252.50Rubredoxin n=1 Tax=Chroomonas mesostigmatica CCMP1... [more]
M2XPL6_GALSU2.910e-3148.53Rubredoxin family protein n=1 Tax=Galdieria sulphu... [more]
A0A8J4FYX4_9CHLO3.500e-3149.61Rubredoxin-like domain-containing protein (Fragmen... [more]
A0A2P6VL59_9CHLO3.550e-3152.99Rubredoxin n=1 Tax=Micractinium conductrix TaxID=5... [more]
A0A7S2RF64_9STRA3.560e-3153.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
I0Z237_COCSC4.470e-3150.39Rubredoxin-like protein n=1 Tax=Coccomyxa subellip... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 106..126
NoneNo IPR availableGENE3D2.20.28.10coord: 130..187
e-value: 1.0E-16
score: 62.2
NoneNo IPR availablePANTHERPTHR47627FAMILY NOT NAMEDcoord: 98..230
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 210..229
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 230..230
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.654
NoneNo IPR availableSUPERFAMILY57802Rubredoxin-likecoord: 134..197
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 210..229
IPR024935Rubredoxin domainPRINTSPR00163RUBREDOXINcoord: 136..152
score: 31.58
coord: 164..180
score: 50.93
IPR024935Rubredoxin domainPFAMPF00301Rubredoxincoord: 137..180
e-value: 6.1E-14
score: 51.8
IPR024934Rubredoxin-like domainPROSITEPS50903RUBREDOXIN_LIKEcoord: 134..183
score: 11.834

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1008contigEcto-sp13_S_contig1008:5331..9574 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1008.108.1mRNA_Ecto-sp13_S_contig1008.108.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1008 5331..9574 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1008.108.1 ID=prot_Ecto-sp13_S_contig1008.108.1|Name=mRNA_Ecto-sp13_S_contig1008.108.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=231bp
MVSSTSVSLGLALLVGVPAGAFVQAPARCAVTQQAASRARGSTSTSPLCL
LKQRPRPLVSSYTTLFSEGEDTSPAAASAEGSGEPNAAAAAAGDGAEVAV
VEEKPLTEAELAQKAKMEEIERLRAKEKFTTVKTGDHECLQCGFVYKPEN
AGQGALPGTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGFGA
NQMTGSQKNLLIFGSLFAFFVLFLAGYALD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024935Rubredoxin_dom
IPR024934Rubredoxin-like_dom