mRNA_Ecto-sp13_S_contig11222.1084.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11222.1084.1 vs. uniprot
Match: D7FTC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC7_ECTSI) HSP 1 Score: 1257 bits (3252), Expect = 0.000e+0 Identity = 695/778 (89.33%), Postives = 719/778 (92.42%), Query Frame = 1
Query: 1 AQLLEGRTGEFAEATADAFLEDWLKTDADRARDAAXXXXXXXXXGGRILSPHENVPPIDRTIGAASTGADATRQGGEGRHFSATRNGSTAHVGHKKKRRSSHDXXXXXXHHTRRRSSGARKIHMMGSTSRDSAGTSSAGSSDSEGGRSNDHVAGHGVSCGKHNGVVGGQGGSQQRRRNAAVGPISSPNGIAPAAPADSQPSAAEHXXXRNRAGKHRAPNEPLAGEHRREKSGEGGSD---ERAAAQQPESISLGQVGREDEEQESLRRATEDSAQLRATVERLERELSSVESGARIGAGGVVGAQGEGFGLAGGSGGIRWGPPTDPTAGAPWMAGGMAAPGLQQYLASLDAENARMMAEIQGLSSGGAGGGGQQFGLTDLRGEVSMGLSPMFPGAAGAPTGRGMAAAGYLGPGLHVNGRGPQVDGSGEQGEGGVCGAITAARKRSRVNGGKERVAPEWDEELLPGARGEPLSPRNKEYRRKMIEMDAEHKEAVKRLEFEMQRLELEQQLEDMRERMAREKKTRQQDVAHGQWVTEQKRNLQAIKIQKTLAKERQLIEVQQTLTDARGGGAGSSALGGGRLAGGGFGEVAAALHAAAGWRPGVGGIVQRPYNKDQGFCVFWDYLTGLPKRSGSKVIGKVRLAFGLYIGKRLHGKMLSTPWTDIEPRAVKNGNTGKAETFSKLETRSTFPGIPVHLQTKLVVELQFKDEAGVQRKGGKGNLGWGCVYVFKPEKGSPHRLTLRAGLTRLTLFPGSVDLRIANVNDDKSAVSRSTPTAAFIR 2325
A+LLEGRTGE+AEATADAFL+DWLKTDADRAR+AAXXXXXXXX GGR+LSPH+N+P IDRTIGAASTGADAT QGG GR SATRNG+TAH GHKKKRRSS D H+TRRRSSG RKIH G TSRDSAGTSSAGSSDSEGGRSNDHVAGHGVS G+H GVVGGQGG+QQRRRNAAVGPIS PNG+APAAPADSQPSA XXXRNRAG+HRAPNE LAGEHR +KSGEGGSD R AAQQPESIS GQ GREDEEQESLRRA +DSAQLRATVERLERELSSV++G R+GAGGVVGAQGEGFGLAGGSGG RWGPPTD TAGAPWMAGGMAAPGLQQYLASLDAENARMMAEIQGLSSGGAGGGGQQFGLT L G+ ++GLS MFPG AGA G+GMAAAGYLGPGLH NGRGPQVDGSGEQGEGG AITAARKRSRVNG KERV PEWDEEL P A GEP SPRNKEYRRKMIEMDAEHKEAVKRLEFEMQRLELEQQLEDMRERMAREKKTRQQDVAH QWVTEQKRNLQAIKIQKTLAKERQLIEVQQTLTDARGGG G+ ALGGGRLAGGGFGEVAAALHAA GWRPGVGGIVQRPYNKDQGFCVFWDYLTGLPKRSGSKVIGKVRLAFGLYIGKRLHGKMLSTPWTDI PRAVKNGNTGKAETFSKLETRSTFPGIPVHLQTKLVVELQFKDEAGVQRKGGKGNLGWGC+YVFKPEKGSPHRLTLRAGLTRLTLFPGSVDLRIANVNDDKSAVSRSTPTAAFIR
Sbjct: 258 AKLLEGRTGEYAEATADAFLDDWLKTDADRAREAAXXXXXXXX-GGRLLSPHDNIPAIDRTIGAASTGADATGQGGVGRRLSATRNGTTAHEGHKKKRRSSRDRGHGNGHYTRRRSSGGRKIHRKGRTSRDSAGTSSAGSSDSEGGRSNDHVAGHGVSHGRHGGVVGGQGGNQQRRRNAAVGPISPPNGVAPAAPADSQPSAXXXXXXRNRAGEHRAPNERLAGEHRSDKSGEGGSDGGDARPAAQQPESISFGQAGREDEEQESLRRAKDDSAQLRATVERLERELSSVKAGTRMGAGGVVGAQGEGFGLAGGSGGSRWGPPTDTTAGAPWMAGGMAAPGLQQYLASLDAENARMMAEIQGLSSGGAGGGGQQFGLTGLGGDANVGLSTMFPGPAGATAGKGMAAAGYLGPGLHGNGRGPQVDGSGEQGEGGGGSAITAARKRSRVNGEKERVGPEWDEEL-PEAGGEPRSPRNKEYRRKMIEMDAEHKEAVKRLEFEMQRLELEQQLEDMRERMAREKKTRQQDVAHEQWVTEQKRNLQAIKIQKTLAKERQLIEVQQTLTDARGGGVGNGALGGGRLAGGGFGEVAAALHAAGGWRPGVGGIVQRPYNKDQGFCVFWDYLTGLPKRSGSKVIGKVRLAFGLYIGKRLHGKMLSTPWTDIAPRAVKNGNTGKAETFSKLETRSTFPGIPVHLQTKLVVELQFKDEAGVQRKGGKGNLGWGCIYVFKPEKGSPHRLTLRAGLTRLTLFPGSVDLRIANVNDDKSAVSRSTPTAAFIR 1033
BLAST of mRNA_Ecto-sp13_S_contig11222.1084.1 vs. uniprot
Match: A0A6H5K786_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K786_9PHAE) HSP 1 Score: 1181 bits (3056), Expect = 0.000e+0 Identity = 661/775 (85.29%), Postives = 686/775 (88.52%), Query Frame = 1
Query: 4 QLLEGRTGEFAEATADAFLEDWLKTDADRARDAAXXXXXXXXXG-GRILSPHENVPPIDRTIGAASTGADATRQGGEGRHFSATRNGSTAHVGHKKKRRSSHDXXXXXXHHTRRRSSGARKIHMMGSTSRDSAGTSSAGSSDSEGGRSNDHVAGHGVSCGKHNGVVGGQGGSQQRRRNAAVGPISSPNGIAPAAPADSQPSAAEHXXXRNRAGKHRAPNEPLAGEHRREKSGEGGSDERAAAQQPESISLGQVGREDEEQESLRRATEDSAQLRATVERLERELSSVESGARIGAGGVVGAQGEGFGLAGGSGGIRWGPPTDPTAGAPWMAGGMAAPGLQQYLASLDAENARMMAEIQGLSSGGAGGGGQQFGLTDLRGEVSMGLSPMFPGAAGAPTGRGMAAAGYLGPGLHVNGRGPQVDGSGEQGEGGVCGAITAARKRSRVNGGKERVAPEWDEELLPGARGEPLSPRNKEYRRKMIEMDAEHKEAVKRLEFEMQRLELEQQLEDMRERMAREKKTRQQDVAHGQWVTEQKRNLQAIKIQKTLAKERQLIEVQQTLTDARGGGAGSSALGGGRLAGGGFGEVAAALHAAAGWRPGVGGIVQRPYNKDQGFCVFWDYLTGLPKRSGSKVIGKVRLAFGLYIGKRLHGKMLSTPWTDIEPRAVKNGNTGKAETFSKLETRSTFPGIPVHLQTKLVVELQFKDEAGVQRKGGKGNLGWGCVYVFKPEKGSPHRLTLRAGLTRLTLFPGSVDLRIANVNDDKSAVSRSTPTAAFIR 2325
QLLEGRTGE+AEATADAFL+DWLKTDADRARDAAXXXXXXXXX G++LSPH+N+PP DRT+GAASTGADATRQGG GR SATRNGSTAH HK KRRSSHD H+TRRRSSG RKIHM G T RDSAGTSSAGSSDSEGG SNDHVA HG G+ +GVVGGQ RRRNAAVGPISSPNG APAAPADSQPSAAEH RNRAGKHRAP+EPLAG KSGEGGSD R AAQQPESI LGQVGREDEE ES R A +DSAQLRATVERLERELSS+++G R GAGGVVGAQGE FGLAGG+GG+RWGPPTDPTAGAPWMAGGMA ENARMMAEI LS+GGAGGGGQQFGLT L G+ +MGLS MFPGAAG TG+GMAAAGYLGPGLH NGRGPQVDGSGEQGEGG AITAARKRSRVNG +RV PEWDEEL GA GEPLSPRNKEYRRKMIEMDAEHKEAVKRLEFEMQRLELEQQLEDMRERMAREKKTRQQDVAH QWVTEQKRNLQAIKIQKTLAKERQLIEV TLTDARGGGAG+S L GGRLAGGGF EVAAALHAA GWRPGVGGIV+RPYNKDQGFCVFWDYLTGLPKRSGSKVIGKVRLAFGLYIGKRLHGKM STPWTDIEPR VKNGNTGKAETFSKLETRSTFPGIPVHLQTKLVVELQFKDEAGVQRKGGKGNLGWGCVYVFKPEKGSPHRLTLRAGLTRLTLFPGSVDLRIANVNDDKSAVSRSTPTAAF+R
Sbjct: 13 QLLEGRTGEYAEATADAFLDDWLKTDADRARDAAXXXXXXXXXXXGQMLSPHDNIPPTDRTLGAASTGADATRQGGVGRRLSATRNGSTAHEDHKNKRRSSHDRGHGNGHYTRRRSSGGRKIHMKGRTPRDSAGTSSAGSSDSEGGPSNDHVAVHGFLRGRPSGVVGGQ-----RRRNAAVGPISSPNGTAPAAPADSQPSAAEHHHHRNRAGKHRAPSEPLAGXXXXXKSGEGGSDGRPAAQQPESIPLGQVGREDEEHESSRGAKDDSAQLRATVERLERELSSMKAGTRTGAGGVVGAQGEVFGLAGGNGGVRWGPPTDPTAGAPWMAGGMA-------------ENARMMAEIHVLSNGGAGGGGQQFGLTGLGGDANMGLSTMFPGAAGTTTGKGMAAAGYLGPGLHGNGRGPQVDGSGEQGEGGGGSAITAARKRSRVNGENQRVGPEWDEELQ-GAGGEPLSPRNKEYRRKMIEMDAEHKEAVKRLEFEMQRLELEQQLEDMRERMAREKKTRQQDVAHEQWVTEQKRNLQAIKIQKTLAKERQLIEVXXTLTDARGGGAGNSVLCGGRLAGGGFSEVAAALHAAGGWRPGVGGIVERPYNKDQGFCVFWDYLTGLPKRSGSKVIGKVRLAFGLYIGKRLHGKMHSTPWTDIEPRTVKNGNTGKAETFSKLETRSTFPGIPVHLQTKLVVELQFKDEAGVQRKGGKGNLGWGCVYVFKPEKGSPHRLTLRAGLTRLTLFPGSVDLRIANVNDDKSAVSRSTPTAAFVR 768
BLAST of mRNA_Ecto-sp13_S_contig11222.1084.1 vs. uniprot
Match: A0A7S2VVL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VVL4_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 2.570e-11 Identity = 83/306 (27.12%), Postives = 143/306 (46.73%), Query Frame = 1
Query: 1429 RKMIEMDAEHKEAVKRLEFEMQRLELEQQLEDMRERMAREKKTRQQDVAHGQWVTEQKRNLQAIKIQKTLAKERQLIEVQQTLTDARGGGAGSSALGGGRLAGGGFGEVAAALHAAAGWRPGVGGIVQRPYNKDQGFCVFWDYLTGLPKRSGSKVIGKVRLAFGLYIGKRLHG-KMLSTPWTDIEPRAVKNGNTGKAETFSKLETRSTFPGIPVHLQTKLVVELQFKDEA-GVQRKGGKGNLGWGCVYVFKP--EKGSPHRLTLRAGLTRLTLFPGSVD---LRIANVND--DKSAVSRSTPTAAF 2319
+++ ++ +H E + +L FE +RLE E ++E++A EK+ ++ +AH +W+ +QKR++QA+++Q+ LA+E + V T+A +S L + H Q Y+ +QGF V DY LP++ + + R+ +Y G R+ K + + D E A NG F+K +P L +L++++ + EA G+ + LGW + +FK E PH LR G ++TL PG+ + LRI N D D + + PT F
Sbjct: 648 KRLEKLKIDHLEYMAKLRFEQERLEQEAANNAIKEKIAAEKEAHERALAHEKWLADQKRSIQALRVQQALARE---MPVGDPATNA------TSVL---------------SHH-------------QMTYDINQGFKVLCDYGISLPRKLKRLDLARTRIVHCIYNGDRMFSAKPKQSKFYDTEKSA--NGTVQTVFGFAK-----AYPKTSPLLTMQLILQVDYTPEADGMANRPLTKTLGWCSLPLFKEVEESEMPH---LRVGNFKVTLHPGAFNASFLRIKNEQDPADPAEDASQKPTLFF 906 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11222.1084.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11222.1084.1 >prot_Ecto-sp13_S_contig11222.1084.1 ID=prot_Ecto-sp13_S_contig11222.1084.1|Name=mRNA_Ecto-sp13_S_contig11222.1084.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=775bp AQLLEGRTGEFAEATADAFLEDWLKTDADRARDAAAAATAAAAAGGRILSback to top mRNA from alignment at Ecto-sp13_S_contig11222:577..4957+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11222.1084.1 ID=mRNA_Ecto-sp13_S_contig11222.1084.1|Name=mRNA_Ecto-sp13_S_contig11222.1084.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4381bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11222:577..4957+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11222:577..4957+ >mRNA_Ecto-sp13_S_contig11222.1084.1 ID=mRNA_Ecto-sp13_S_contig11222.1084.1|Name=mRNA_Ecto-sp13_S_contig11222.1084.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2325bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11222:577..4957+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |