mRNA_Ecto-sp13_S_contig11212.1072.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11212.1072.1 vs. uniprot
Match: A0A6H5KMM8_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM8_9PHAE) HSP 1 Score: 439 bits (1128), Expect = 8.780e-155 Identity = 203/217 (93.55%), Postives = 211/217 (97.24%), Query Frame = 1
Query: 169 MYIFYPLAPYRMKMVQPHARLVVILKDPTARYFSHARMTMCGKIDESKPKTSVNFRLQEFHAPGRAAGYLNRGTHKVERYAPLCRGVNAEPGDLAKCFIATNGQNPLLRGLYADQLERWFAAFPRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYDSDFQHSTGACKDNRPQFFGDDGRYKKMLEQEQLFRDWYRPYNERLYSLIGKDLKWD 819
MY+FYPLAPYRMKMVQPHARLVVILKDPTARYFSHARMTMCGKIDESKPKTSVN+RL+ FHAPGRAAGYLNRGT KVERYAPLCRGVNAEPGDLAKCF+A NGQNPLLRGLYADQLERWFA F RSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYY+SDFQHSTGACK+NRPQFFG+DGRYKKMLEQEQLFRDWYRP+NERLYSLIGKD KWD
Sbjct: 1 MYVFYPLAPYRMKMVQPHARLVVILKDPTARYFSHARMTMCGKIDESKPKTSVNYRLRAFHAPGRAAGYLNRGTDKVERYAPLCRGVNAEPGDLAKCFMAINGQNPLLRGLYADQLERWFAVFSRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYNSDFQHSTGACKENRPQFFGEDGRYKKMLEQEQLFRDWYRPHNERLYSLIGKDFKWD 217
BLAST of mRNA_Ecto-sp13_S_contig11212.1072.1 vs. uniprot
Match: D7G3W5_ECTSI (Similar to heparan sulfate sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W5_ECTSI) HSP 1 Score: 355 bits (911), Expect = 2.040e-119 Identity = 186/273 (68.13%), Postives = 193/273 (70.70%), Query Frame = 1
Query: 1 SLGEWPGNTGDARRKQLPVSAAGEVLELYSNATMRTIGAPDELEEAGVTVTVESSPMYIFYPLAPYRMKMVQPHARLVVILKDPTARYFSHARMTMCGKIDESKPKTSVNFRLQEFHAPGRAAGYLNRGTHKVERYAPLCRGVNAEPGDLAKCFIATNGQNPLLRGLYADQLERWFAAFPRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYDSDFQHSTGACKDNRPQFFGDDGRYKKMLEQEQLFRDWYRPYNERLYSLIGKDLKWD 819
SLGEWPGNTGDARR +LP SAAGEVLELYSNATMRTIGAPDELEEAGVTVTV+SSPMYIFYPLAPYRMKMVQPHARLVVILKDPTAR + A RG + R +QLERWFA FPRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYDSDFQH TGACKDNRPQFFG+DGRYKKMLEQEQLFRDWYRP+NERLYSLIGKDLKWD
Sbjct: 166 SLGEWPGNTGDARRAKLPASAAGEVLELYSNATMRTIGAPDELEEAGVTVTVDSSPMYIFYPLAPYRMKMVQPHARLVVILKDPTAR-----------------------------------------------KIAVFLRGFSD-------------------RKRQPNQLERWFAVFPRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYDSDFQHGTGACKDNRPQFFGEDGRYKKMLEQEQLFRDWYRPHNERLYSLIGKDLKWD 372
BLAST of mRNA_Ecto-sp13_S_contig11212.1072.1 vs. uniprot
Match: A0A6H5JDR2_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR2_9PHAE) HSP 1 Score: 278 bits (711), Expect = 3.750e-87 Identity = 136/271 (50.18%), Postives = 177/271 (65.31%), Query Frame = 1
Query: 10 EWPGNTGDARRKQ-LPVSAAGEVLELYSNATMRTIGAPDELEEAGVTVTVESSPMYIFYPLAPYRMKMVQPHARLVVILKDPTARYFSHARMTMCGKIDESKPKTSVNFRLQEFHAPGRAAGYLNRGTHKVERYAPLCRGVNAEPGDLAKCFIATNGQNPLLRGLYADQLERWFAAFPRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYDSDFQHSTGACKDNRPQFFGDDGRYKKMLEQEQLFRDWYRPYNERLYSLIGKDLKWD 819
EW GD R L SAAGEVL Y++ M + + + TVES+P+Y FYPLAPYRMKMV P ARLV+IL+DPT RYFSH RM MC D + FH PGR YL RG + Y PLCRG A DL +C+ A +PL RGLYADQLERWF +PRSQILV++SSE++ +F TL++ ARH+GLPPH + YDS QH++ C+ N P+ F + GRY+KMLE +++ ++WYRP+NERLY L+G+++ W+
Sbjct: 269 EW---RGDGRGGAGLNSSAAGEVLSAYADRAMEAV----DPRKRDTMATVESTPLYFFYPLAPYRMKMVLPAARLVLILRDPTERYFSHLRMMMCWTRDSETFDHLEKRQKTYFHIPGRVKEYLERGEASYKPYTPLCRGEEARAKDLLRCWKAMVTHDPLHRGLYADQLERWFRVYPRSQILVLESSEMFGNFTGTLDKVARHIGLPPHGYEYDSRHQHASAPCERNHPELFAEGGRYQKMLEDQRVLQEWYRPHNERLYRLLGREMPWE 532
BLAST of mRNA_Ecto-sp13_S_contig11212.1072.1 vs. uniprot
Match: D7G3W4_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W4_ECTSI) HSP 1 Score: 259 bits (663), Expect = 1.010e-83 Identity = 128/229 (55.90%), Postives = 157/229 (68.56%), Query Frame = 1
Query: 148 VTVESSPMYIFYPLAPYRMKMVQPHARLVVILKDPTARYFSHARMTMC-GKIDESKPKTSVNFRLQEFHAPGRAAGYLNRGTHKVERYAPLCRGVNAEPGDLAKCFIATNGQNPLLRGLYADQLERWFAAFPRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYDSDFQHSTGAC----KDNRPQFFGDDGRYKKMLEQEQLFRDWYRPYNERLYSLIGKDLKWD 819
VTVESSP YIF PLAPYRM MVQP ARLV++L+DPT RYFS RMTMC GK +++ + N + FH+PG AAGY++ G E Y PLCRG NA DL C+ A +PLLRGLYADQLERWF F +SQIL++DS+ + D L A H+GLP DF D QHSTG C + P FFG++GRY KMLE+E LFR+WYRP+NERL+ L+G+ + WD
Sbjct: 12 VTVESSPRYIFNPLAPYRMGMVQPFARLVLVLRDPTDRYFSQLRMTMCSGKTNQTFERVQEN-QATWFHSPGDAAGYIDGGEATYEPYTPLCRGENATTEDLRDCYRAQLPHHPLLRGLYADQLERWFRVFDKSQILIVDSANMMEDLPGVLADVAAHIGLPGSDFDSDRPVQHSTGLCPALGRGEDPDFFGEEGRYDKMLEEEDLFREWYRPHNERLFKLLGRSMMWD 239
BLAST of mRNA_Ecto-sp13_S_contig11212.1072.1 vs. uniprot
Match: D7FST9_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST9_ECTSI) HSP 1 Score: 236 bits (601), Expect = 1.760e-70 Identity = 122/242 (50.41%), Postives = 157/242 (64.88%), Query Frame = 1
Query: 10 EWPGN-TGDARRKQLPVSAAGEVLELYSNATMRTIGAPDELEEAGVTVTVESSPMYIFYPLAPYRMKMVQPHARLVVILKDPTARYFSHARMTMCGKIDESKPKTSVNFRLQE-FHAPGRAAGYLNRGTHKVERYAPLCRGVNAEPGDLAKCFIATNGQNPLLRGLYADQLERWFAAFPRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYDSDFQHSTGACKDNRPQFFGDDGRYKK 729
EWPG+ G A L SAAGEVL Y++ M+ + + + TVESSP+Y+F+PLAPYRM+MV P ARLV+IL+DPT RYFSH RM MCG D + + RL+ FH PGR YL +G + Y PLCRG A DL +C+ A +PL RGLY DQLERW +PRSQILV++SSE++ DF TL + ARH+GLPPHDF YDS QH++ C+ + P+ F + GRY +
Sbjct: 325 EWPGDGRGGAG---LNPSAAGEVLSAYADRAMKAV----DPSKRDTMATVESSPLYLFFPLAPYRMRMVLPAARLVLILRDPTERYFSHLRMMMCGTRD-GETFDQLEERLETYFHIPGRVKEYLEQGEASYKPYTPLCRGEGARAKDLLRCWKAMVTHDPLHRGLYVDQLERWLRVYPRSQILVVESSEMFGDFTGTLNQVARHIGLPPHDFSYDSRHQHASAPCERHHPELFAEGGRYSR 558
BLAST of mRNA_Ecto-sp13_S_contig11212.1072.1 vs. uniprot
Match: D7G9G8_ECTSI (Putative deacetylase sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G8_ECTSI) HSP 1 Score: 198 bits (503), Expect = 3.500e-57 Identity = 114/253 (45.06%), Postives = 141/253 (55.73%), Query Frame = 1
Query: 4 LGEWPGNTGDARRKQLPVSAAGEVLELYSNATMRTIGAPDE-------LEEAGVTVTVESSPMYIFYPLAPYRMKMVQPHARLVVILKDPTARYFSHARMTMCGKIDESKPKTSVNFRLQ-EFHAPGRAAGYLNRGTHKVERYAPLCRGVNAEPGDLAKCFIATNGQNPLLRGLYADQLERWFAAFPRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYDSDFQHSTGACKD-----NRPQFFGDDGRY 723
LG W G D R K+L A G +L Y+ + G P + + V VESSP YI P+APYRM+MV P A+LVV+L+DPT RYFS RM MC K + S+ ++ FH PG+A GY+ R Y CRG NA DL CF A NPL RGLYADQLERWF + +SQILVIDS+E++ +F T+ A GLP H+F YD GAC+D N+P FF D GRY
Sbjct: 178 LGHWQG---DGREKELSPGAIGRILSEYAKTCLEE-GKPKKKPAWHKNVAAMSSGVIVESSPRYILSPIAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMC-KTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPYGERCRGENATSADLWNCFKAMATHNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAVVAEWAGLPEHEFEYDK--HEFKGACRDKIRYHNQPDFFADGGRY 423
BLAST of mRNA_Ecto-sp13_S_contig11212.1072.1 vs. uniprot
Match: A0A6H5KC11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC11_9PHAE) HSP 1 Score: 149 bits (376), Expect = 1.220e-41 Identity = 78/136 (57.35%), Postives = 90/136 (66.18%), Query Frame = 1
Query: 148 VTVESSPMYIFYPLAPYRMKMVQPHARLVVILKDPTARYFSHARMTMC-GKIDESKPKTSVNFRLQEFHAPGRAAGYLNRGTHKVERYAPLCRGVNAEPGDLAKCFIATNGQNPLLRGLYADQLERWFAAFPRSQI 552
VTVESSP YIF PLAPYRM MVQP ARLV++L+DPT RYFS RMTMC GK +++ FH+PG AAGY++ E Y PLCRG A DL KC A +PL RGLYADQLERWF F +SQ+
Sbjct: 12 VTVESSPTYIFNPLAPYRMGMVQPFARLVLVLRDPTDRYFSQLRMTMCSGKANQTFEGVKE---AAWFHSPGDAAGYIDGAEATYEPYTPLCRGEKATAMDLRKCSRAQRRHHPLFRGLYADQLERWFRVFDKSQV 144
BLAST of mRNA_Ecto-sp13_S_contig11212.1072.1 vs. uniprot
Match: A0A6H5K695_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K695_9PHAE) HSP 1 Score: 135 bits (341), Expect = 1.100e-34 Identity = 86/273 (31.50%), Postives = 133/273 (48.72%), Query Frame = 1
Query: 10 EWPGNTGDARRKQLPVSAAGEVLELYSNATMRTIGAPDELEEAGVTVTVESSPMYIFYPLAPYRMKMVQPHARLVVILKDPTARYFSHARMTMCG-KIDESKPKTSVNFRLQEFHAPGRAAGYLNRGTHKVERYAPLCRGVNAEPGDLAKCFIATN-GQNPLLRGLYADQLERWFAAFPRSQILVIDSSELYRDFLPTLERAARHLGLPP-HDFYYDSDFQHSTGACKDNRPQFFGDDGRYKKMLEQEQLFRDWYRPYNERLYSLIGKDLKWD 819
EWPG D K+LP S G++LE ++ + + ++ + VT SP Y LAPYR+K+ P ++VV+L+DPT RY+S R +C ++D +S F PG GYL+ Y C G A DL C PLL+GLYA QL+RW AF SQ+LV+ + +L+++ T A+ GL H F+ + + ++ + P+ Y K E E R WY +N+ + L+G+++ W+
Sbjct: 21 EWPG---DNLEKELPASVLGKLLEEFARPYTVSESRQEGID-GPILVTTAVSPGYFSSHLAPYRLKLAIPDVKVVVVLRDPTDRYYSELREALCADEVDWEDIMSS-------FAMPGACKGYLSDAVLDYSPYDKRCLGEGASAADLWACQKGLEKSHTPLLKGLYAAQLDRWQRAFGESQVLVVQAEKLFQEPEKTAAEVAKFAGLAAEHSFFEFAVDREASCDPRRKNPEVVT---AYSKRKESEPQLRKWYAEHNDIVSELLGEEMGWN 279
BLAST of mRNA_Ecto-sp13_S_contig11212.1072.1 vs. uniprot
Match: D8LJ80_ECTSI (N-deacetylase/N-sulfotransferase (Heparan glucosaminyl) 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ80_ECTSI) HSP 1 Score: 134 bits (336), Expect = 1.820e-32 Identity = 86/274 (31.39%), Postives = 132/274 (48.18%), Query Frame = 1
Query: 10 EWPGNTGDARRKQLPVSAAGEVLELYSNATMRTIGAPDELEEAGVTVTVESSPMYIFYPLAPYRMKMVQPHARLVVILKDPTARYFSHARMTMCG-KIDESKPKTSVNFRLQEFHAPGRAAGYLNRGTHKVERYAPLCRGVNAEPGDLAKCFIATN-GQNPLLRGLYADQLERWFAAFPRSQILVIDSSELYRDFLPTLERAARHLGLPP-HDFY-YDSDFQHSTGACKDNRPQFFGDDGRYKKMLEQEQLFRDWYRPYNERLYSLIGKDLKWD 819
EWPG D K+LP S G++LE ++ + + ++ + VT SP Y LAPYR+K+ P ++VV+L+DPT RY+S R +C ++D +S + P + YL+ Y C G A DL C PLL+GLYA QLERW AF SQ+LV+ + +L+++ T A+ GL H F+ + D + S + P+ Y K E E R WY +N+ + L+G+++ W+
Sbjct: 214 EWPG---DNLEKELPASVLGKLLEEFARPYTVSESRHEGVDAPNL-VTTAVSPGYFASHLAPYRLKLAMPDVKIVVVLRDPTNRYYSELREALCADEVDWEDIMSS-------YAMPAASKDYLSDAVLDYSPYDKRCLGEGASAADLWACQKGLEKSHTPLLKGLYAPQLERWQRAFGESQVLVVQAEKLFQEPEKTAAEVAKFAGLAAEHTFFEFAVDREASCDPRRKKNPEVVT---AYSKRKESEPQLRKWYAEHNDMVSELLGEEMGWN 473
BLAST of mRNA_Ecto-sp13_S_contig11212.1072.1 vs. uniprot
Match: A0A839PY38_9MICO (Sulfotransfer_1 domain-containing protein n=2 Tax=Terracoccus luteus TaxID=53356 RepID=A0A839PY38_9MICO) HSP 1 Score: 97.4 bits (241), Expect = 4.190e-20 Identity = 72/222 (32.43%), Postives = 100/222 (45.05%), Query Frame = 1
Query: 151 TVESSPMYIFYPLAPYRMKMVQPHARLVVILKDPTARYFSHARMTMCGKIDESKPKTSVNFRLQEFHAPGRAAGYLNRGTHKVERYAPLCRGVNAEPGDLAKCFIATNGQNPLLRGLYADQLERWFAAFPRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYDSDFQHSTGACKDNRPQFFGDDGRYKKMLEQEQLFRDWYRPYNERLYSLIGKDLKW 816
T E+SP Y+++PLAP R+ P R V +L+DP AR SH R ++ ++ P + + E R A YL E +A L + F + RGLYADQLERWF PR Q+LV+ S E+Y D P +R LGL PH G +P+ D + E E+ F P+N+RL +L+G W
Sbjct: 103 TFEASPYYLYHPLAPQRIAAAMPEGRFVALLRDPAARAVSHYRHSVERGVE---PLSFADALAAEDE---RLAPYLGHDVTSREAHAAL------------RSFSYAS------RGLYADQLERWFEHVPREQVLVLKSEEMYADPAPVYDRVLDFLGLAPHT-------PDRFGVFSRPKPRI--DAPADSTLAELERRFA----PHNDRLANLLGWSGSW 287 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11212.1072.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11212.1072.1 >prot_Ecto-sp13_S_contig11212.1072.1 ID=prot_Ecto-sp13_S_contig11212.1072.1|Name=mRNA_Ecto-sp13_S_contig11212.1072.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=274bp SLGEWPGNTGDARRKQLPVSAAGEVLELYSNATMRTIGAPDELEEAGVTVback to top mRNA from alignment at Ecto-sp13_S_contig11212:1130..5516- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11212.1072.1 ID=mRNA_Ecto-sp13_S_contig11212.1072.1|Name=mRNA_Ecto-sp13_S_contig11212.1072.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4387bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11212:1130..5516- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11212:1130..5516- >mRNA_Ecto-sp13_S_contig11212.1072.1 ID=mRNA_Ecto-sp13_S_contig11212.1072.1|Name=mRNA_Ecto-sp13_S_contig11212.1072.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=822bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11212:1130..5516- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |