mRNA_Ecto-sp13_S_contig11211.1071.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11211.1071.1 vs. uniprot
Match: D8LML3_ECTSI (Imidazole glycerol phosphate synthase hisHF n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LML3_ECTSI) HSP 1 Score: 234 bits (596), Expect = 4.460e-72 Identity = 112/114 (98.25%), Postives = 114/114 (100.00%), Query Frame = 1
Query: 1 RGGELTGDSSIEQISHVYGKQAVVVSVDPRRVYVANPEDAPKHTVLKIKDSDKGGPMGQRYCWYQCTVKGGREGKDIDAVSLAKSCETLGAGEILLNCVDMDGQKDGFDLELVK 342
RGGELTGDSSIEQISHVYGKQAVVVSVDPRRVYVANPEDAPKHTVLK+K+SDKGGPMGQRYCWYQCTVKGGREGKDIDAVSLAKSCETLGAGEILLNCVDMDGQKDGFDLELVK
Sbjct: 406 RGGELTGDSSIEQISHVYGKQAVVVSVDPRRVYVANPEDAPKHTVLKVKESDKGGPMGQRYCWYQCTVKGGREGKDIDAVSLAKSCETLGAGEILLNCVDMDGQKDGFDLELVK 519
BLAST of mRNA_Ecto-sp13_S_contig11211.1071.1 vs. uniprot
Match: A0A835ZC23_9STRA (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC23_9STRA) HSP 1 Score: 167 bits (423), Expect = 8.070e-47 Identity = 78/111 (70.27%), Postives = 94/111 (84.68%), Query Frame = 1
Query: 10 ELTGDSSIEQISHVYGKQAVVVSVDPRRVYVANPEDAPKHTVLKIKDSDKGGPMGQRYCWYQCTVKGGREGKDIDAVSLAKSCETLGAGEILLNCVDMDGQKDGFDLELVK 342
+L+G S+IEQIS VYG+QAVV+SVDPRRVYVA+PE+AP HT L + + GP GQ+Y WYQCTV+GGREG+D+DAV L ++CE LGAGEILLNC+DMDGQK GFDL LVK
Sbjct: 380 QLSGTSAIEQISKVYGRQAVVISVDPRRVYVASPEEAPTHTCLHLPHAP--GPEGQQYAWYQCTVRGGREGRDVDAVQLVRACEALGAGEILLNCIDMDGQKQGFDLALVK 488
BLAST of mRNA_Ecto-sp13_S_contig11211.1071.1 vs. uniprot
Match: A0A2G6FD88_9DELT (Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Desulfobulbus propionicus TaxID=894 RepID=A0A2G6FD88_9DELT) HSP 1 Score: 164 bits (415), Expect = 6.500e-46 Identity = 78/111 (70.27%), Postives = 89/111 (80.18%), Query Frame = 1
Query: 7 GELTGDSSIEQISHVYGKQAVVVSVDPRRVYVANPEDAPKHTVLKIKDSDKGGPMGQRYCWYQCTVKGGREGKDIDAVSLAKSCETLGAGEILLNCVDMDGQKDGFDLELV 339
G TG SSIEQI+ VYG QAVV+SVDPRRVYV PEDAPKHTV+K GP G+ YCWYQCT+KGGREG+D+DAV+LAK CE LGAGEILLNC+D DG GFD+EL+
Sbjct: 354 GRATGLSSIEQIARVYGNQAVVISVDPRRVYVNAPEDAPKHTVMKTAIP---GPNGEEYCWYQCTIKGGREGRDLDAVTLAKVCEELGAGEILLNCIDRDGTNSGFDIELI 461
BLAST of mRNA_Ecto-sp13_S_contig11211.1071.1 vs. uniprot
Match: A0A448ZSD3_9STRA (Imidazole glycerol-phosphate synthase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSD3_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.190e-45 Identity = 73/114 (64.04%), Postives = 94/114 (82.46%), Query Frame = 1
Query: 1 RGGELTGDSSIEQISHVYGKQAVVVSVDPRRVYVANPEDAPKHTVLKIKDSDKGGPMGQRYCWYQCTVKGGREGKDIDAVSLAKSCETLGAGEILLNCVDMDGQKDGFDLELVK 342
R GE TG+SSIE ISHVYG QAVV+S+DP+RVYVA+ +DA K V+ D GP G+++CW+QCTVKGGRE +DI AV++AK+C+TLGAGEI+LNC+DMDGQ +GFDL L++
Sbjct: 151 RNGEKTGESSIETISHVYGAQAVVISIDPKRVYVASKDDADKKHVVVELDDGSSGPNGEKFCWFQCTVKGGREERDICAVTVAKACQTLGAGEIMLNCIDMDGQGNGFDLPLMR 264
BLAST of mRNA_Ecto-sp13_S_contig11211.1071.1 vs. uniprot
Match: A0A7C2TKD1_9DELT (Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Desulfurivibrio alkaliphilus TaxID=427923 RepID=A0A7C2TKD1_9DELT) HSP 1 Score: 162 bits (411), Expect = 3.380e-45 Identity = 76/115 (66.09%), Postives = 91/115 (79.13%), Query Frame = 1
Query: 1 RGGELTGDSSIEQISHVYGKQAVVVSVDPRRVYVANPEDAPKHTVLKIKDSDKGGPMGQRYCWYQCTVKGGREGKDIDAVSLAKSCETLGAGEILLNCVDMDGQKDGFDLELVKV 345
RG + G SSIEQI+HVYG QAVV+S+DPRRVYV +P DAPKH V+ GP G+ YCWYQCTVKGGREG+DIDA +LA++CE LGAGEILLNC+D DG GFDLEL+++
Sbjct: 374 RGRQKGGKSSIEQIAHVYGNQAVVISIDPRRVYVTSPTDAPKHRVIPTAFP---GPNGEEYCWYQCTVKGGREGRDIDAATLAQACEELGAGEILLNCIDKDGTNSGFDLELIRL 485
BLAST of mRNA_Ecto-sp13_S_contig11211.1071.1 vs. uniprot
Match: A0A8K1CIM2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIM2_PYTOL) HSP 1 Score: 160 bits (405), Expect = 2.570e-44 Identity = 79/112 (70.54%), Postives = 94/112 (83.93%), Query Frame = 1
Query: 16 TGDSSIEQISHVYGKQAVVVSVDPRRVYVAN--PEDAPKHTVLKIKDSDKGGPMGQRYCWYQCTVKGGREGKDIDAVSLAKSCETLGAGEILLNCVDMDGQKDGFDLELVKV 345
+GDSSIEQIS VYGKQAVVVS+DPRRVYVA+ E A H+V+K+ K GP G+ YCWYQ TVKGGRE +DIDAV +AK+CE LGAGEILLNCVDMDGQKDG+DL+L+++
Sbjct: 378 SGDSSIEQISAVYGKQAVVVSLDPRRVYVASFHDESAQNHSVVKLS---KPGPNGEEYCWYQATVKGGREARDIDAVGVAKACEALGAGEILLNCVDMDGQKDGYDLDLIRL 486
BLAST of mRNA_Ecto-sp13_S_contig11211.1071.1 vs. uniprot
Match: I5AYU9_9DELT (Imidazole glycerol phosphate synthase subunit HisH n=7 Tax=Desulfobacter TaxID=2289 RepID=I5AYU9_9DELT) HSP 1 Score: 160 bits (404), Expect = 2.750e-44 Identity = 75/117 (64.10%), Postives = 93/117 (79.49%), Query Frame = 1
Query: 7 GELTGDSSIEQISHVYGKQAVVVSVDPRRVYVANPEDAPKHTVLKIKDSDKGGPMGQRYCWYQCTVKGGREGKDIDAVSLAKSCETLGAGEILLNCVDMDGQKDGFDLELVKVTDSS 357
G+ T S+IE+IS VYG QAVV+SVDP+R +VA+PEDAPKH V+K+ +KG P G+ YCWYQCTV GGR+ DIDAV+LAK+CE LGAGEILLNC+D DG K GFDL+L+ S+
Sbjct: 356 GQKTKRSAIEEISRVYGAQAVVISVDPKRAWVASPEDAPKHHVVKVTSGEKG-PNGEVYCWYQCTVSGGRKAMDIDAVALAKACEALGAGEILLNCIDKDGTKSGFDLDLINAVRSN 471
BLAST of mRNA_Ecto-sp13_S_contig11211.1071.1 vs. uniprot
Match: UPI001FF5FE62 (imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Desulfatitalea sp. M08but TaxID=2929485 RepID=UPI001FF5FE62) HSP 1 Score: 159 bits (401), Expect = 6.860e-44 Identity = 73/111 (65.77%), Postives = 88/111 (79.28%), Query Frame = 1
Query: 7 GELTGDSSIEQISHVYGKQAVVVSVDPRRVYVANPEDAPKHTVLKIKDSDKGGPMGQRYCWYQCTVKGGREGKDIDAVSLAKSCETLGAGEILLNCVDMDGQKDGFDLELV 339
G TGDS+IEQIS VYG QAVV+S+DPRRVYVA P++ P H + GP G+RYCWYQCTVKGGREG+ IDAV+LA+ C+ LGAGEILLNC+D DG +DGFD+EL+
Sbjct: 354 GRATGDSAIEQISRVYGSQAVVISIDPRRVYVATPDEVPHHVLQTAIP----GPRGERYCWYQCTVKGGREGRPIDAVTLARVCQQLGAGEILLNCIDRDGTRDGFDIELI 460
BLAST of mRNA_Ecto-sp13_S_contig11211.1071.1 vs. uniprot
Match: A0A7S3XYZ3_HETAK (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYZ3_HETAK) HSP 1 Score: 159 bits (403), Expect = 8.010e-44 Identity = 78/112 (69.64%), Postives = 90/112 (80.36%), Query Frame = 1
Query: 7 GELTGDSSIEQISHVYGKQAVVVSVDPRRVYVANPEDAPKHTVLKIKDSDKGGPMGQRYCWYQCTVKGGREGKDIDAVSLAKSCETLGAGEILLNCVDMDGQKDGFDLELVK 342
G G SSIEQISHVYG QAVVVS+DPRRVYV P DAPKHTV ++ GP G+R+CWYQ TVKGGREG+D+DAV+LAK+C+ LGAGEILLNCVD DGQ +G+DL L K
Sbjct: 409 GAPQGGSSIEQISHVYGAQAVVVSIDPRRVYVDGPGDAPKHTVFELPAP--AGPEGKRFCWYQATVKGGREGRDLDAVALAKACQALGAGEILLNCVDSDGQCNGYDLILTK 518
BLAST of mRNA_Ecto-sp13_S_contig11211.1071.1 vs. uniprot
Match: A0A3D6BXW0_9DELT (Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3D6BXW0_9DELT) HSP 1 Score: 158 bits (400), Expect = 1.020e-43 Identity = 76/111 (68.47%), Postives = 89/111 (80.18%), Query Frame = 1
Query: 7 GELTGDSSIEQISHVYGKQAVVVSVDPRRVYVANPEDAPKHTVLKIKDSDKGGPMGQRYCWYQCTVKGGREGKDIDAVSLAKSCETLGAGEILLNCVDMDGQKDGFDLELV 339
GE TG S+IEQIS YG QAVV+S+DP+RV+V PEDAPKH V+ ++ GP GQRYCWYQCTVKGGRE +DIDAV+LAK+CE LGAGEILLNC+D DG GF LEL+
Sbjct: 356 GEKTGKSAIEQISLKYGAQAVVISIDPQRVWVTAPEDAPKHHVMASPET---GPEGQRYCWYQCTVKGGREARDIDAVALAKACEALGAGEILLNCIDKDGTNSGFALELI 463 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11211.1071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11211.1071.1 >prot_Ecto-sp13_S_contig11211.1071.1 ID=prot_Ecto-sp13_S_contig11211.1071.1|Name=mRNA_Ecto-sp13_S_contig11211.1071.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=119bp RGGELTGDSSIEQISHVYGKQAVVVSVDPRRVYVANPEDAPKHTVLKIKDback to top mRNA from alignment at Ecto-sp13_S_contig11211:4199..5508- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11211.1071.1 ID=mRNA_Ecto-sp13_S_contig11211.1071.1|Name=mRNA_Ecto-sp13_S_contig11211.1071.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1310bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11211:4199..5508- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11211:4199..5508- >mRNA_Ecto-sp13_S_contig11211.1071.1 ID=mRNA_Ecto-sp13_S_contig11211.1071.1|Name=mRNA_Ecto-sp13_S_contig11211.1071.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=357bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11211:4199..5508- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |