mRNA_Ecto-sp13_S_contig112.1062.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig112.1062.1 vs. uniprot
Match: D7G7R8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7R8_ECTSI) HSP 1 Score: 343 bits (880), Expect = 1.010e-109 Identity = 187/228 (82.02%), Postives = 188/228 (82.46%), Query Frame = 1
Query: 1 TTEGIKAILMSRGSIEQLHQARLNELEEHKNEDTWVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRHVYGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQMHANLVIAKKAAAAXXXXXXXXXXXXXXXXXXSNSVDNKAVPQAKSPNPAGAEEMWEEERGGGDGGCK 684
TTEGIKAILMSRGSIEQLHQ VQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTR YGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQMHANLVIAKKAAAA SNS D KAVPQAKSPNPAGAEEMWEEERGGG G +
Sbjct: 304 TTEGIKAILMSRGSIEQLHQ---------------VQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTR--YGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQMHANLVIAKKAAAAVTAAQAKARKEDAKRKSNSNSADTKAVPQAKSPNPAGAEEMWEEERGGGAGDAR 514
BLAST of mRNA_Ecto-sp13_S_contig112.1062.1 vs. uniprot
Match: A0A6H5J9P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9P9_9PHAE) HSP 1 Score: 286 bits (731), Expect = 1.020e-86 Identity = 183/231 (79.22%), Postives = 189/231 (81.82%), Query Frame = 1
Query: 1 TTEGIKAILMSRGSIEQLHQARLNELEEHKNEDTWVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRHV---YGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQMHANLVIAKKAAAAXXXXXXXXXXXXXXXXXXSNSVDNKAVPQAKSPNPAGAEEMWEEERGGGDGGCK 684
TTEGIKAILMSRGSIEQLHQAR N S W G + T +A L L++ + YGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQMHANLVIAKKAAAAXXXXXXXXXXXXXXXXXXSNSVDNKAVPQAKSPNPAGAEEMWE ERGGG G +
Sbjct: 367 TTEGIKAILMSRGSIEQLHQARCNH------------SGW-GRTLLPSRPR----STSMAPSLLLSSSSIQGTYGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQMHANLVIAKKAAAAXXXXXXXXXXXXXXXXXXSNSVDNKAVPQAKSPNPAGAEEMWEGERGGGTGDAR 580
BLAST of mRNA_Ecto-sp13_S_contig112.1062.1 vs. uniprot
Match: A0A7S1FR75_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FR75_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.050e-27 Identity = 74/163 (45.40%), Postives = 96/163 (58.90%), Query Frame = 1
Query: 7 EGIKAILMSRGSIEQLHQARLNELEEHKNEDTWVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRHVYGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQMHANL 495
+GI++IL+ R SIE + VQSQW G + F++KAEVDFDGT+LAA+L Y +EFR+ DK D LLS+Y EDVMR EREVR+ E EIR YP AAYIELEPDS + FA++ + AL+K+E L +M +L
Sbjct: 4 KGIESILLQRRSIEGVSS---------------VQSQWTGPYAFSYKAEVDFDGTYLAARLMSR----YKKEFRKATEGSSLDK----DLSVLLSWYAEDVMRLVEREVRDIEAEIRSVYPGAAYIELEPDSKYSDQFAIDDVKQEALQKIEMDALEKMMVSL 143
BLAST of mRNA_Ecto-sp13_S_contig112.1062.1 vs. uniprot
Match: A0A7S1FQ98_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQ98_9STRA) HSP 1 Score: 121 bits (303), Expect = 3.810e-26 Identity = 76/164 (46.34%), Postives = 97/164 (59.15%), Query Frame = 1
Query: 4 TEGIKAILMSRGSIEQLHQARLNELEEHKNEDTWVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRHVYGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQMHANL 495
TEGI++IL+ R SIE + VQSQW G + F++KAEVDFDGT+LAA+L Y +EFR+ DK D LLS+Y EDVMR EREVR+ E EIR YP AAYIELEPDS + FA++ + AL+K+E L +M +L
Sbjct: 325 TEGIESILLQRRSIEGVSS---------------VQSQWTGPYAFSYKAEVDFDGTYLAARLMSR----YKKEFRKATEGSSLDK----DLSVLLSWYAEDVMRLVEREVRDIEAEIRSVYPGAAYIELEPDSKYSDQFAIDDVKQEALQKIEMDALEKMMVSL 465
BLAST of mRNA_Ecto-sp13_S_contig112.1062.1 vs. uniprot
Match: A0A7S1DBT2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBT2_CYCTE) HSP 1 Score: 115 bits (287), Expect = 3.490e-25 Identity = 76/161 (47.20%), Postives = 92/161 (57.14%), Query Frame = 1
Query: 4 TEGIKAILMSRGSIEQLHQARLNELEEHKNEDTWVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRHVYGQEFRQLLARPPDDKGKYKDHE--TLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQ 480
TEGI+ IL+ R SI+ + VQSQW G TF+FKAEVDFDGTFLAAKL Y EF ++ G D E LLS+Y EDVMR EREV+E E EIRK+YP A YIELEP S + FA++ T LR++E LN+
Sbjct: 152 TEGIEKILLLRRSIDNVQS---------------VQSQWTGPETFSFKAEVDFDGTFLAAKLMPR----YQNEFLEV--------GDSLDSELRVLLSWYAEDVMRTVEREVKEIEAEIRKRYPGAEYIELEPMSKDSDRFAIDDGMTGQLRRIEVEALNR 285
BLAST of mRNA_Ecto-sp13_S_contig112.1062.1 vs. uniprot
Match: A0A7S0FKN8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FKN8_9STRA) HSP 1 Score: 111 bits (278), Expect = 5.960e-25 Identity = 70/159 (44.03%), Postives = 92/159 (57.86%), Query Frame = 1
Query: 4 TEGIKAILMSRGSIEQLHQARLNELEEHKNEDTWVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRHVYGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQ 480
TE IK IL+++ SI+ +H +QSQW G TF++KAEVDFDGTFLAAKL Y EF + K KD LLS+Y EDVMR+AERE++ E +IRK+YP A YIELEP S + FA++ L+++E LN+
Sbjct: 64 TEAIKKILLNQKSIDGVHS---------------IQSQWTGPETFSYKAEVDFDGTFLAAKLMPR----YQTEFLKA------QKSLDKDLRVLLSWYAEDVMRSAEREIKYIEAQIRKEYPGAEYIELEPMSKDSDRFAIDDGMEAQLKRIEIENLNR 197
BLAST of mRNA_Ecto-sp13_S_contig112.1062.1 vs. uniprot
Match: B8C824_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C824_THAPS) HSP 1 Score: 112 bits (280), Expect = 7.100e-23 Identity = 78/170 (45.88%), Postives = 97/170 (57.06%), Query Frame = 1
Query: 1 TTEGIKAILMSRGSIEQLHQARLNELEEHKNEDTWVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRHVYGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQMHANLVIAKK 510
T E I+ I++SR SI+ ++ VQSQW G TF++KAEVDFDGTFLAAKL Y QEF A+ D+ D LLS+Y EDVMRAAEREVR E EIR KYP A YIELEP S + +A++ LR+VE LN+ +L K+
Sbjct: 471 TREDIEKIILSRRSIDNVYS---------------VQSQWTGPDTFSYKAEVDFDGTFLAAKLMPR----YQQEFFD--AKHTLDR----DLRVLLSWYAEDVMRAAEREVRHIEEEIRLKYPSAQYIELEPMSKDADRYAIDDGMEAQLRRVEIEVLNRYLKSLYKIKE 615
BLAST of mRNA_Ecto-sp13_S_contig112.1062.1 vs. uniprot
Match: A0A7S2SWT6_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SWT6_9STRA) HSP 1 Score: 110 bits (276), Expect = 8.400e-23 Identity = 72/164 (43.90%), Postives = 104/164 (63.41%), Query Frame = 1
Query: 4 TEGIKAILMSRGSIEQLHQARLNELEEHKNEDTWVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRHVYGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQMHANL 495
T IKA+L+SR SI+ +H V QW G +TF++KAE+DFDGT++AA+L ++R++ EF+ A+ D KD + LL++Y EDV+R EREV E +IR++YPEAA+IEL PDS+ + FA+E + ALR+VE+ T+NQ A L
Sbjct: 303 TGAIKALLLSRPSIDAVHS---------------VTHQWEGPYTFSYKAELDFDGTYIAARL--HSRYL--TEFQN--AQDLD-----KDLKILLAWYAEDVVRVVEREVNLLEAKIREEYPEAAFIELVPDSTDTSAFAIEGNKQQALRRVEQETINQYLAQL 440
BLAST of mRNA_Ecto-sp13_S_contig112.1062.1 vs. uniprot
Match: A0A067BE64_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BE64_SAPPC) HSP 1 Score: 107 bits (268), Expect = 9.250e-23 Identity = 71/163 (43.56%), Postives = 95/163 (58.28%), Query Frame = 1
Query: 7 EGIKAILMSRGSIEQLHQARLNELEEHKNEDTWVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRHVYGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQMHANL 495
+GIKA+L+SR SI+ ++ VQSQWVG TF+FKAEVDFDGT++AA+L + V+ E + L A P LL++Y EDV R E+EV+E E EIR YPEAA+IELEPDS +M AL T + R E +++ A+L
Sbjct: 139 QGIKALLLSRPSIDNVYA---------------VQSQWVGPSTFSFKAEVDFDGTYMAAQLLEIYKPVF-LEAKDLKADLP----------LLLAWYAEDVTRLVEKEVQEVEAEIRALYPEAAFIELEPDSKDTDMRALSNLGTKSFRTSEREAMSRALAHL 275
BLAST of mRNA_Ecto-sp13_S_contig112.1062.1 vs. uniprot
Match: A0A7S2RB90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RB90_9STRA) HSP 1 Score: 103 bits (258), Expect = 2.660e-22 Identity = 72/169 (42.60%), Postives = 92/169 (54.44%), Query Frame = 1
Query: 1 TTEGIKAILMSRGSIEQLHQARLNELEEHKNEDTWVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRHVYGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQMHANLVIAK 507
T + IK IL R SI+ + +QSQ+ G TF++KAEVDFDGTFLAAKL Y QEF L A+ P D LLS+Y EDVMR EREV+ E EIRK+YP A YIELEP S + FA++ ++++E LN+ +L K
Sbjct: 30 TVQNIKLILEKRRSIDNVQS---------------IQSQYTGPETFSYKAEVDFDGTFLAAKLMPR----YQQEF--LKAQLPHDLN------VLLSWYAEDVMRTVEREVKHIEFEIRKQYPGAEYIELEPMSKDADRFAIDDGMEAQIKRIEIEALNRYLKSLYHTK 171 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig112.1062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig112.1062.1 >prot_Ecto-sp13_S_contig112.1062.1 ID=prot_Ecto-sp13_S_contig112.1062.1|Name=mRNA_Ecto-sp13_S_contig112.1062.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=225bp MSRGSIEQLHQARLNELEEHKNEDTWVQSQWVGTHTFAFKAEVDFDGTFLback to top mRNA from alignment at Ecto-sp13_S_contig112:35669..39186- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig112.1062.1 ID=mRNA_Ecto-sp13_S_contig112.1062.1|Name=mRNA_Ecto-sp13_S_contig112.1062.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3518bp|location=Sequence derived from alignment at Ecto-sp13_S_contig112:35669..39186- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig112:35669..39186- >mRNA_Ecto-sp13_S_contig112.1062.1 ID=mRNA_Ecto-sp13_S_contig112.1062.1|Name=mRNA_Ecto-sp13_S_contig112.1062.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=675bp|location=Sequence derived from alignment at Ecto-sp13_S_contig112:35669..39186- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |