prot_Ecto-sp13_S_contig10077.106.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10077.106.1
Unique Nameprot_Ecto-sp13_S_contig10077.106.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length417
Homology
BLAST of mRNA_Ecto-sp13_S_contig10077.106.1 vs. uniprot
Match: A0A6H5L3M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M5_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 2.300e-97
Identity = 148/158 (93.67%), Postives = 153/158 (96.84%), Query Frame = 0
Query:    1 MAVLNHQSCDEGQERWYTSIRELQLVSLKFCGVCRSTSILRVRVDHKAPPSLWSPTKSFSYALPDAWNRVPAVRAYGWTWSIPVDTLLKVRDLRYWAQTELSRRGSFPEAKLASVVWPQGLKQLEFDLDTAVEKASWPASLQSLTFGCSFNQPILGAV 158
            +AVLNHQSC EG++RWYTSIRELQLVSLKFCGVCRSTSILRVRV+H APPSLWSPTKSFSYALPDAWNRVPAVRAYGWTWSIPVDTLLKV DLRYWA+ ELSRRGSFPEAKLASVVWPQGLKQLEFDLDTAVEKASWPASLQSLTFGCSFNQPILG V
Sbjct:  108 VAVLNHQSCVEGKKRWYTSIRELQLVSLKFCGVCRSTSILRVRVEHNAPPSLWSPTKSFSYALPDAWNRVPAVRAYGWTWSIPVDTLLKVCDLRYWAKAELSRRGSFPEAKLASVVWPQGLKQLEFDLDTAVEKASWPASLQSLTFGCSFNQPILGVV 265          
BLAST of mRNA_Ecto-sp13_S_contig10077.106.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.270e-28
Identity = 70/160 (43.75%), Postives = 95/160 (59.38%), Query Frame = 0
Query:    3 VLNHQSCDEGQERWYTSIRELQLVSLKFCGVCRSTSILRVRVDHKAPPSLWSPTKSFSYA---LPDAW--NRVPAVRAYGWTWSIPVDTLLKVRDLRYWAQTELSRRGSFPEA-KLASVVWPQGLKQLEFDLDTAVEKASWPASLQSLTFGCSFNQPILG 156
            V  +Q+CD  ++RWY S  ELQLVSL+ CG CR    L VRV  + PPSLW P+++ +      P     +RVP V+A+G TW++P+  L +       + +   R  +   A  L S VWPQ LK++ F+ D  V  ASWPASLQ L+FGC FNQ I+G
Sbjct:   15 VALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTVNTASWPASLQQLSFGCGFNQAIVG 174          
BLAST of mRNA_Ecto-sp13_S_contig10077.106.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.440e-22
Identity = 67/164 (40.85%), Postives = 91/164 (55.49%), Query Frame = 0
Query:    3 VLNHQSCDEGQERWYTSIRELQLVSLKFCGVCRSTSILRVRVDHKAPPSLWSPTKSFSY--------ALPDAWNRVPAVRAYGWTWSIPVDTLLKVRDLRYWAQTELSRRGSFPEAKLAS--VVWPQGLKQLEFDLDTAVEKASWPASLQSLTFGCSFNQPILG 156
            V   Q+ D   +RWY S  ELQLVSL+FCG CRS     V++  + P SLWSP KS            +P   +RVPAV+A GW W++P++ LL  R      Q   +R+ + P +  +   + W Q L +L F  + +V   SWPA LQ L+FG  FNQPI+G
Sbjct:   35 VALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIP---SRVPAVQANGWMWALPMEILLP-RSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYSERSVNSVSWPACLQELSFGDFFNQPIIG 194          
BLAST of mRNA_Ecto-sp13_S_contig10077.106.1 vs. uniprot
Match: A0A6H5K2L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.720e-20
Identity = 62/151 (41.06%), Postives = 82/151 (54.30%), Query Frame = 0
Query:    3 VLNHQSCDEGQERWYTSIRELQLVSLKFCGVCRSTSILRVRVDHKAPPSLWSPTKSFSYALPDAWNRVPAVRAYGWTWSIPVDTLLKVRDLRYWAQTELSRRGSFPEA-KLASVVWPQGLKQLEFDLDTAVEKASWPASLQSLTFGCSFNQ 152
            V  +++CD G++RWY S  ELQ VSL+FC  CR     RV   H           S    L    +R P VRAY  TW++ +D LL+   +     ++  R G    A  LAS++W Q LK+L  +LDT V  ASWPASLQ L+FG  FN+
Sbjct:   25 VALNRTCDGGEQRWYASTLELQPVSLEFCVACR-----RVPTSHST---------STVGRLVSGVSRAPVVRAYSLTWALSMDVLLQSCAMELQRGSKYRRSGGHSSAANLASMLWLQRLKRLVLELDTPVITASWPASLQQLSFGYKFNK 161          
BLAST of mRNA_Ecto-sp13_S_contig10077.106.1 vs. uniprot
Match: A0A6H5JSE5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSE5_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 2.100e-8
Identity = 35/74 (47.30%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    3 VLNHQSCDEGQERWYTSIRELQLVSLKFCGVCRSTSILRVRVDHKAPPSLWSPTKSFSYALPDAWNRVPAVRAY 76
            V  +Q+ D  +++WY S  ELQLVSL FCG CRS  +L + VD   PPSLW P KS  Y  P+   R+ A R +
Sbjct:  981 VTMNQAADGRKQQWYASTLELQLVSLAFCGACRSAKMLHLHVDRGKPPSLWFPHKS--YTTPN--KRIAASRVW 1050          
BLAST of mRNA_Ecto-sp13_S_contig10077.106.1 vs. uniprot
Match: A0A6H5JTV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV8_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.620e-6
Identity = 49/132 (37.12%), Postives = 62/132 (46.97%), Query Frame = 0
Query:    3 VLNHQSCDEGQERWYTSIRELQLVSLKFCGVCRSTSILRVRVDHKAPPSLWSPTKSFSYALPD--------AWNRVPAVRAYGWTWSIPVDTLLKVRDLRYWAQTELSRRGSFPEAKLASVVWPQGLKQLEF 126
            VLN      G   W  S  EL+LVS + C  CRS S L +RV    P  LW+   +   A P         +   VP  R    TW +P  TL   R    +A  E    GSF + + +SVVWP+GLK+LEF
Sbjct:   37 VLNQNH--SGGAGWLASTSELRLVSFQSCVECRSLSRLALRVSSDTPERLWAAGYAIENAPPSDRAHETVSSAANVPPFRVVKATWLLP--TLALKRTGPAFAGLEELSLGSF-KFRSSSVVWPRGLKKLEF 163          
BLAST of mRNA_Ecto-sp13_S_contig10077.106.1 vs. uniprot
Match: A0A6H5J7K7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K7_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 2.950e-6
Identity = 33/88 (37.50%), Postives = 48/88 (54.55%), Query Frame = 0
Query:   68 NRVPAVRAYGWTWSIPVDTLLKVRDLRYWAQT-ELSRRGSFPEAKLASVVWPQGLKQLEFDLDTAVEKASWPASLQSLTFGCSFNQPI 154
            +RVP V+A+G    +P + LL+   +   + +     +G    A L S+ W + L  L  +LDT   K SW ASLQ L+FG  FNQP+
Sbjct:    2 SRVPGVQAFGLLLGLPTEVLLQSSAIELGSGSGHQHMKGHASAASLGSMSWLKKLNWLVLELDTPANKTSWAASLQQLSFGDCFNQPL 89          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10077.106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L3M5_9PHAE2.300e-9793.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNI6_9PHAE1.270e-2843.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8K9_9PHAE1.440e-2240.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2L2_9PHAE1.720e-2041.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSE5_9PHAE2.100e-847.30Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JTV8_9PHAE1.620e-637.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7K7_9PHAE2.950e-637.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 119..305
e-value: 4.7E-9
score: 37.1
IPR008615FNIPPFAMPF05725FNIPcoord: 282..325
e-value: 1.8E-8
score: 34.4
coord: 348..389
e-value: 8.3E-8
score: 32.3
coord: 150..193
e-value: 2.5E-7
score: 30.8
coord: 194..236
e-value: 3.1E-6
score: 27.3
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 215..323
coord: 111..235
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 313..408
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 313..408
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 215..323
coord: 111..235
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 137..410

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10077contigEcto-sp13_S_contig10077:2980..4230 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10077.106.1mRNA_Ecto-sp13_S_contig10077.106.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10077 2980..4257 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10077.106.1 ID=prot_Ecto-sp13_S_contig10077.106.1|Name=mRNA_Ecto-sp13_S_contig10077.106.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=417bp
MAVLNHQSCDEGQERWYTSIRELQLVSLKFCGVCRSTSILRVRVDHKAPP
SLWSPTKSFSYALPDAWNRVPAVRAYGWTWSIPVDTLLKVRDLRYWAQTE
LSRRGSFPEAKLASVVWPQGLKQLEFDLDTAVEKASWPASLQSLTFGCSF
NQPILGAVWPSSLQQLSLGHDFNQSIDGVRWPSCLRELSFGYKFNQPIAG
VLWPGSLEALSFGNCFDQPIAGTVWPSSLQQLSFGHCFDQGIVGVVWPAS
LQQLSFGYQFNKTLAGVLWPAYLQRLLFGHFFNQPIAGVWWPASLQQLSF
GGSFNQPIAGVSWPASLQQLSFGGFFNQPITDVVWPASLQQLSFGTLFNQ
PITGASWPTSLQQLSFGDNFNQPIAGVLWPCSLQDLSFGFGFMQSARGVV
WPASLRSVALGGTKLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP