prot_Ecto-sp13_S_contig10073.100.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10073.100.1
Unique Nameprot_Ecto-sp13_S_contig10073.100.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length360
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10073.100.1 vs. uniprot
Match: A0A6H5K3H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H3_9PHAE)

HSP 1 Score: 400 bits (1027), Expect = 6.450e-134
Identity = 249/359 (69.36%), Postives = 257/359 (71.59%), Query Frame = 0 
Query:    1 MCRKRSMEISRWLIFVVISASSIASGEQPPASPPSQHGIRIDSRARPPXXXXXXXXXXXXXXXXXXISPSPWSFPPRQQRHSTVLSTREGGCAGSASAPAGAFLEHYSPAAAXXXXXXXXXXAATRVPVLQQLPSKAANATRTLLPLAPFVVEVPALAAHARAAWPWARSAMTAAVAVAFSRRPFAFVLPPTQPRPYRRWKQXXXXXXXXXPRAIARIHQEREEQQACCGPSRLGRRGFFSISSSGSGSGSDGGSSTNDRSALHPSNRSPSCCRDVDVATSSFTRRGAIEKTLVSAARWWAVVAAGSSVAFADADVGATRVGDQLSSKALTKESYDGFAEGYDDLDGGWAASAIGLEAS 359
            MC KRS E+SRWLIF VISASSIASGEQP ASPPS HGIRIDSRARPP                  ISPSPWS PPRQQR+STVLSTRE G  GSASAPA AFLEH+SP+AA XXXXXXXXXAA RVPVLQ LPSKAAN TR LLPLAPFVVEVPALAAHARAA PWARSAMTAAVA AFSRRPFA                                                  RGF  +S  G       GSSTNDRSAL P++RSPSCCRDVDVAT S TRRGAIE+TLVSAARWWAV AAGSS AFADADVGAT VGDQLSSKALTKESYDGFAEGYDDLDGGWAASAIGLEAS
Sbjct:    1 MCWKRSTEVSRWLIFAVISASSIASGEQPLASPPSHHGIRIDSRARPPPSPDDTAATLTTSSSPAPISPSPWSSPPRQQRYSTVLSTREDGRVGSASAPA-AFLEHFSPSAAAXXXXXXXXXAAARVPVLQHLPSKAANVTRNLLPLAPFVVEVPALAAHARAARPWARSAMTAAVAAAFSRRPFA--------------------------------------------------RGFICLSGGGXXXXXXXGSSTNDRSALDPNSRSPSCCRDVDVATPSLTRRGAIEETLVSAARWWAVAAAGSSGAFADADVGATGVGDQLSSKALTKESYDGFAEGYDDLDGGWAASAIGLEAS 308
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BLAST of mRNA_Ecto-sp13_S_contig10073.100.1 vs. uniprot
Match: D8LQ21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ21_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 7.880e-24
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 0 
Query:  297 ARWWAVVAAGSSVAFADADVGATRVGDQLSSKALTKESYDGFAEGYDDLDGGWAASAIGLE 357
            ARWWAV AA SS AFAD DVGAT VGDQLSSKALTKESYDGFAEGYD+LDGGWAASAIGLE
Sbjct:    2 ARWWAVAAAASSGAFADTDVGATGVGDQLSSKALTKESYDGFAEGYDNLDGGWAASAIGLE 62
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10073.100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K3H3_9PHAE6.450e-13469.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ21_ECTSI7.880e-2490.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..359
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.634

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10073contigEcto-sp13_S_contig10073:1226..2720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10073.100.1mRNA_Ecto-sp13_S_contig10073.100.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10073 1226..2720 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10073.100.1 ID=prot_Ecto-sp13_S_contig10073.100.1|Name=mRNA_Ecto-sp13_S_contig10073.100.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=360bp
MCRKRSMEISRWLIFVVISASSIASGEQPPASPPSQHGIRIDSRARPPPS
PDATAATLTTSSSPAPISPSPWSFPPRQQRHSTVLSTREGGCAGSASAPA
GAFLEHYSPAAAAAAAAASVATAATRVPVLQQLPSKAANATRTLLPLAPF
VVEVPALAAHARAAWPWARSAMTAAVAVAFSRRPFAFVLPPTQPRPYRRW
KQQQQQQQQQKPRAIARIHQEREEQQACCGPSRLGRRGFFSISSSGSGSG
SDGGSSTNDRSALHPSNRSPSCCRDVDVATSSFTRRGAIEKTLVSAARWW
AVVAAGSSVAFADADVGATRVGDQLSSKALTKESYDGFAEGYDDLDGGWA
ASAIGLEAS*
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