prot_Ecto-sp13_S_contig11119.977.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11119.977.1
Unique Nameprot_Ecto-sp13_S_contig11119.977.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length302
Homology
BLAST of mRNA_Ecto-sp13_S_contig11119.977.1 vs. uniprot
Match: D7FT50_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT50_ECTSI)

HSP 1 Score: 498 bits (1283), Expect = 9.300e-174
Identity = 273/301 (90.70%), Postives = 279/301 (92.69%), Query Frame = 0
Query:    1 YYADKVQIREAAAADAVVAASRAKSRGPEARGSGGRPATEGREKKKQTVDVAASLQKLKAFILKPKKAAKAASLMADLMEAHMRPDNARMFFRALKPLAEEPAGEAALAAGEGGARSFRNLAERASEWVATPLEGVRAVTWELLFGLRHDTKTDDSFTFARAIKRLREAIEALGDVTGGGMATDGTAGEGDDGXXXGSARGNGVSLSLERKLALILVMKEAFKSYHLAWARSSIEPAFKAAADRRRLFPEGELRDTLDGFTDAITKRQRNPGGLMAPPSRSVRAHNSTAHPMLNKRSDVIR 301
            YYAD+VQIR AAAADAVVAASRAKSRGPEARGSGGRP TEGREKK QTVDVAASLQKLK FILKPKKAAKAASLMADLMEAH+RP+NARMFFRALKPLAEEPAGEAALAAGEGGAR+FR LA+RASEWV  P EGVRAVTWELLFGLRHDTKTDDSFTFARAIKRLREAIEALG VTGGG ATDGT       XX GSA GN VSLSLERK ALILVMKEAFKSYHLAWARSSIEPAFKAAADRRRLFPEG+LRDTLD FTDAITKRQRNPGGLMAPPSRSVRAHNSTAHPMLNKRSDVIR
Sbjct:  185 YYADRVQIRAAAAADAVVAASRAKSRGPEARGSGGRPETEGREKKTQTVDVAASLQKLKVFILKPKKAAKAASLMADLMEAHLRPENARMFFRALKPLAEEPAGEAALAAGEGGARAFRKLAQRASEWVGAPSEGVRAVTWELLFGLRHDTKTDDSFTFARAIKRLREAIEALGGVTGGGKATDGTXXXXXXXXXTGSAGGNRVSLSLERKTALILVMKEAFKSYHLAWARSSIEPAFKAAADRRRLFPEGDLRDTLDDFTDAITKRQRNPGGLMAPPSRSVRAHNSTAHPMLNKRSDVIR 485          
BLAST of mRNA_Ecto-sp13_S_contig11119.977.1 vs. uniprot
Match: A0A8J2SLZ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SLZ0_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.080e-9
Identity = 74/263 (28.14%), Postives = 125/263 (47.53%), Query Frame = 0
Query:   43 EKKKQTVDVAASLQKLKAFI-----LKPKKAAKAASLMADL--MEAHMRPDNARMFFRALKPLAEEPAGEAALAAGEGGARSFRNLAERASEWVATPLEGVRAVTWEL-LFGLRHDTKTDDSFTFARAIKRLREAIEALGDVTGGGMATDGTAGEGDDGXXXGSARGNGVSLSLERKLALILVMKEAFKSYHLA-WARSSIEPAFKAAADRRRLFPEGELRDTLDGFTDAITKRQRNPGGLMAPPSRSVRAHNSTAHPMLNKR 296
            +K +QTVD AA+++++ A +         KA+KA +++A L  ++  +  + A ++  AL+  A   A    L    G A      A+R+S  V    + V+  TW L L   R   +TDD++ F  A+KR+ +A+EALG              E D               +++R+ A++  +K  + +Y    WA++ +E A  A A+RR LF E + R  +D  T  +  +QR   GL    +  VR  + T+HP+   R
Sbjct:  131 KKTEQTVDAAATVKRVCAILKSSARTNAAKASKALAMLATLAGVDGGVTEETAPLYVDALRSFAASGAVSDGLVGPLGDAVEALGKADRSSFGVD---DRVQVATWRLSLRTARTLRETDDTYDFCAAMKRVHKAVEALG------------LDESD--------------AAVQRRDAIVHCLKSGWAAYESKPWAKTPVEAAVLACAERRHLFSEAQ-RTRIDRLTTQVKSKQR---GLCRVETAPVRDVDDTSHPLREVR 360          
BLAST of mRNA_Ecto-sp13_S_contig11119.977.1 vs. uniprot
Match: A0A7S2HDH6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HDH6_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.660e-6
Identity = 45/143 (31.47%), Postives = 63/143 (44.06%), Query Frame = 0
Query:  153 TDDSFTFARAIKRLREAIEALGDVTGGGMATDGTAGEGDDGXXXGSARGNGVSLSLERKLALILVMKEAFKSYHLAWARSSIEPAFKAAADRRRLFPEGELRDTLDGFTDAITKRQRNPGGLMAPPSRSVRAHNSTAHPMLNK 295
            +DD++TFARA+KR+R A+E + D  G                      G G      R+L L  +     K   L WA+  IE     AA+ R  F EG  R+ LD  T+ +   QR         +R+VR  +S  HP+ NK
Sbjct:   65 SDDTYTFARAMKRVRGAVEGVADKYG-------------------KDEGGGCY----RRLILACLETSLVKRSQL-WAKPEIERTMTLAAENRLHFSEGAERNHLDSLTEKMRHGQRK-----VIVNRTVRVVDSITHPLRNK 178          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11119.977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FT50_ECTSI9.300e-17490.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J2SLZ0_9STRA1.080e-928.14Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2HDH6_9STRA6.660e-631.47Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36749FAMILY NOT NAMEDcoord: 19..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11119contigEcto-sp13_S_contig11119:1..2060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11119.977.1mRNA_Ecto-sp13_S_contig11119.977.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11119 1..2060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11119.977.1 ID=prot_Ecto-sp13_S_contig11119.977.1|Name=mRNA_Ecto-sp13_S_contig11119.977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp
YYADKVQIREAAAADAVVAASRAKSRGPEARGSGGRPATEGREKKKQTVD
VAASLQKLKAFILKPKKAAKAASLMADLMEAHMRPDNARMFFRALKPLAE
EPAGEAALAAGEGGARSFRNLAERASEWVATPLEGVRAVTWELLFGLRHD
TKTDDSFTFARAIKRLREAIEALGDVTGGGMATDGTAGEGDDGEGTGSAR
GNGVSLSLERKLALILVMKEAFKSYHLAWARSSIEPAFKAAADRRRLFPE
GELRDTLDGFTDAITKRQRNPGGLMAPPSRSVRAHNSTAHPMLNKRSDVI
R*
back to top