prot_Ecto-sp13_S_contig100701.97.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig100701.97.1
Unique Nameprot_Ecto-sp13_S_contig100701.97.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length52
Homology
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BLAST of mRNA_Ecto-sp13_S_contig100701.97.1 vs. uniprot
Match: D8LMA8_ECTSI (Nischarin/ IRAS/ imidazoline receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA8_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 4.790e-15
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 0 
Query:    1 RRSRLLLPAPPVGRHEAALVWKLFRLARDSTALRVHR 37
            RRSRLLLPAPPVGRHEAALVWKLFRLARD+TALRVHR
Sbjct:  338 RRSRLLLPAPPVGRHEAALVWKLFRLARDATALRVHR 374
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BLAST of mRNA_Ecto-sp13_S_contig100701.97.1 vs. uniprot
Match: A0A6H5K372_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K372_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 4.790e-15
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 0 
Query:    1 RRSRLLLPAPPVGRHEAALVWKLFRLARDSTALRVHR 37
            RRSRLLLPAPPVGRHEAALVWKLFRLARD+TALRVHR
Sbjct:  236 RRSRLLLPAPPVGRHEAALVWKLFRLARDATALRVHR 272
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig100701.97.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMA8_ECTSI4.790e-1597.30Nischarin/ IRAS/ imidazoline receptor n=1 Tax=Ecto... [more]
A0A6H5K372_9PHAE4.790e-1597.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig100701contigEcto-sp13_S_contig100701:2..157 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig100701.97.1mRNA_Ecto-sp13_S_contig100701.97.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig100701 2..157 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig100701.97.1 ID=prot_Ecto-sp13_S_contig100701.97.1|Name=mRNA_Ecto-sp13_S_contig100701.97.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=52bp
RRSRLLLPAPPVGRHEAALVWKLFRLARDSTALRVHRCSKCFRVFSGGVL
PG
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