mRNA_Ecto-sp13_S_contig11101.960.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11101.960.1
Unique NamemRNA_Ecto-sp13_S_contig11101.960.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: D7G011_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G011_ECTSI)

HSP 1 Score: 570 bits (1468), Expect = 4.410e-192
Identity = 276/296 (93.24%), Postives = 282/296 (95.27%), Query Frame = 1
Query:    1 CAVMVRLWYGYGTVIRQPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILTARHAGVDPDAVRASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESV 888
            C   V  W     +  QPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLA+LPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGL+QIVHGAKPTILTARHAGVDPDAVRASL+EEGS+ EV RLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQES+
Sbjct:  125 CGGWVAEWDHEQLIAMQPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAILPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLVQIVHGAKPTILTARHAGVDPDAVRASLREEGSREEVDRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESL 420          
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: A0A6H5L492_9PHAE (GT20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L492_9PHAE)

HSP 1 Score: 299 bits (765), Expect = 2.790e-95
Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 1
Query:   49 QPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGF 483
            + AVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLA+LPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQV F
Sbjct:  353 KAAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAILPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVCF 497          
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: A0A7S3XSU4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSU4_HETAK)

HSP 1 Score: 265 bits (678), Expect = 4.910e-83
Identity = 129/275 (46.91%), Postives = 182/275 (66.18%), Query Frame = 1
Query:   67 ALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILTARHAGVDPDAVRASLQEE-GSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESV 888
            AL   +CVPV+L   +  + Y  +CKGVLWPV H ML++Y D      D   +   W AY QVNR FRD++VEV+++ D++W+HGFHL ++P+FL R+V VA++GLFLHTPFP  E+FR LP REDLLRGML ADQ+GFH +  S+HF+T C RLLGLTH     TG I++ +  +  ++T+ HAGVDP+   A L++E G  AEV+ L      + V  G+++VE++KG+ LKL+ +   L R P  VG+V +H+VG++      DY +    V
Sbjct:   85 ALQPFDCVPVWLEADLAEKFYSGFCKGVLWPVFHNMLDVYGDAAVDFWDAQHLDGLWFAYTQVNRKFRDRIVEVYNDRDLVWVHGFHLLLVPSFLSRSV-VAKVGLFLHTPFPSSEIFRTLPFREDLLRGMLVADQIGFHVYEYSRHFLTCCVRLLGLTH-EQGPTGQIEVRYNGRQVLVTSVHAGVDPEVFEAILRDEAGVAAEVAALQARAAGKFVFLGLDKVERLKGLQLKLVGYARFLERNPDAVGKVLLHQVGLSASELQQDYNSSAAEV 357          
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: V5K3Y9_SACJA (Trehalose-6-phosohate synthase n=1 Tax=Saccharina japonica TaxID=88149 RepID=V5K3Y9_SACJA)

HSP 1 Score: 271 bits (692), Expect = 2.980e-79
Identity = 124/276 (44.93%), Postives = 174/276 (63.04%), Query Frame = 1
Query:   49 QPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILTARHAGVDPDAVRASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRAC 876
            + AV KALL  +CVPVFL +S+  + Y  +CKGVLWPV H ++++Y D          +   WQAY  VNR FRDK+VEV++EGDM+W+HGFHL +LP+FL R ++ AR+GLFLHTPFP  E+FR LP REDLLRGML ADQ+GFH F  ++HF+T C+R+LGL    S   G   + +  +   + + H G++P  + A+L   G     + L   +  R V  G+++VE++KG+ LK  AF   L   P L  ++ + +VGI+   R  DY  C
Sbjct:  232 EEAVAKALLPFSCVPVFLERSLAQKFYRDFCKGVLWPVFHHVVDVYGDQVMRFFAQDVLADLWQAYANVNRRFRDKIVEVYNEGDMVWVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYARHFLTCCKRILGLNEGDSNNRGNTNVFYNGRCVSIESMHGGIEPSIIAANLSNPGIVGRAAELRKEYQGRFVFLGIDKVERLKGLQLKFTAFYKFLLERPHLADKIVLLQVGISALEREQDYHKC 507          
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: A0A7S2F9H1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9H1_9STRA)

HSP 1 Score: 251 bits (642), Expect = 1.030e-76
Identity = 119/290 (41.03%), Postives = 179/290 (61.72%), Query Frame = 1
Query:   49 QPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLP---------NSLLDDAAITQ-GWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILTARHAGVDPDAVRASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESV 888
            Q  +   L + NCVP+++   + H  + ++CK  LWPV H +LE+Y  +P         N+  + +   Q  W AY  V R F+  ++E++H+GD+IWIHGFHL +LP FL R + +A+IGLFLHTPFP  E+FR L  R+DLLRGML ADQ+GFH +  ++HF+T CRR+LGL   H  E   I + +G +  ++T  HAG+D + + + LQ +  + +++ L     D+ V AG++R+E++KGV LKLLAFE  L + P   G V ++++ +A   RG DY      V
Sbjct:   30 QDELTSILEQFNCVPIYIDPELHHAFFSTFCKQTLWPVFHNLLEIYGPVPTGQAAREAGNAFREGSRPEQDAWSAYTSVQRIFKKTIIEMYHDGDLIWIHGFHLLLLPTFLSRQLHMAKIGLFLHTPFPSSEIFRTLSKRDDLLRGMLSADQIGFHLYEYARHFLTCCRRILGLEWTH--ERNGINVHYGGRSVLITCIHAGMDQEVLHSVLQTQDVQRDINDLMRKTKDKTVFAGIDRMERLKGVPLKLLAFERFLEKNPTRAGNVVLYQISLAVRERGDDYSTTSAQV 317          
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: A0A7S2UVC1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVC1_9STRA)

HSP 1 Score: 258 bits (658), Expect = 5.360e-76
Identity = 121/275 (44.00%), Postives = 176/275 (64.00%), Query Frame = 1
Query:   64 KALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILTARHAGVDPDAVRASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESV 888
            +AL   +CVPV+L +++  + Y  +CKGVLWP+ H ++++Y DL     D   +   WQAY  VNR FRDK+VEV++E D+IWIHGFHL ++P+FL R + VA++GLFLHTPFP  E+FR LP REDLLRG+L ADQVGFH +  S+HF+TSC R+LGL        G + I +  +   + + HAGVDPD V   L     + E+ +L      + +   +++VE+++G+ LKL  +E  L+  P LV +V + +VG+  P R  D+  C + V
Sbjct:   18 QALAVFDCVPVWLDEALATKFYQEFCKGVLWPIFHNVVDIYGDLSTHFWDSDTLGTAWQAYMMVNRQFRDKIVEVYNECDLIWIHGFHLLLVPSFLSRVLHVAKVGLFLHTPFPSSEIFRTLPFREDLLRGILNADQVGFHLYEHSRHFLTSCVRILGLPS-GPDGRGHMAITYNGRDVNVNSTHAGVDPDKVADVLAMPEVEEEMRQLEEAFSGKFLFVSIDKVERLRGLQLKLNGYERFLKENPELVDKVVLLQVGLNAPERDKDFSRCLDEV 291          
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: K8YR86_NANGC (Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YR86_NANGC)

HSP 1 Score: 256 bits (655), Expect = 3.830e-74
Identity = 125/281 (44.48%), Postives = 177/281 (62.99%), Query Frame = 1
Query:   49 QPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILTARHAGVDPDAVR-ASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESV 888
            Q ++ +AL K +CVPVF+   I  + Y ++CKG LWPV H +L++Y   P    D       W +Y  VN  FRDKVVEV++EGD+IWIHGFHL VLP+F+ +++  A+ GLFLHTPFP  E+FR L  REDLLRGML AD +GFH +  ++HF+T  RR+LG+T  +  E G + + +  +   +++ H GVD  A+R   L E   + EV +L      R V+ G++R+E+I+G+ LKLLAFE  L  +P   G+V + +VGI    RG DY   +  V
Sbjct:  379 QESLARALRKFDCVPVFIDPEIHDKFYNTFCKGTLWPVFHHILDVYGSRPTRFWDQKTQDSVWHSYSHVNMRFRDKVVEVYNEGDLIWIHGFHLLVLPSFITKSLPTAKTGLFLHTPFPSSEIFRTLSVREDLLRGMLNADHIGFHLYEYARHFVTCVRRILGVT--YDMEGGQMAVHYNGRTVAISSIHVGVDSAAIRHLMLAEPEMQLEVDKLRQQFAGRKVILGIDRLERIRGIPLKLLAFERFLATHPEWKGKVVLFQVGITASERGEDYPRTKREV 657          
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: A0A7S2BW05_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BW05_9STRA)

HSP 1 Score: 245 bits (626), Expect = 1.380e-70
Identity = 120/272 (44.12%), Postives = 175/272 (64.34%), Query Frame = 1
Query:   76 KLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSL-LDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILTARHAGVDPDAVRASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESV 888
            K +CVP+FL +  +H CY  +CKGVLWPV H +LE+      ++   + +  +GW AY  V R F+  ++E F+EGD+IWIHGFHL +LP+FL R   VA+IGLFLHTPFP  E+F  L  RED+LR ML AD +GFH +  ++HF+T CRR+LGL  +H + TG I +++G +  +++  HAG+DP A+  +L++   + E  RL  L   R +  G++R+E++KGV LKLLAFE  L        +V +H++G++  AR  DY      V
Sbjct:  244 KFHCVPIFLDEKTSHTCYQVFCKGVLWPVFHNLLEVMSTENAAVQFSNKSGDEGWLAYTTVQRVFKKAIIEHFNEGDLIWIHGFHLLLLPSFLSRGF-VAKIGLFLHTPFPSSEIFCTLSKREDILRSMLNADHIGFHVYEYARHFLTCCRRVLGLEWVH-EGTG-IHVLYGGRKVLISCMHAGMDPSALYKALEDHQVQKEADRLNCLKRGRTMFVGMDRMERLKGVPLKLLAFERFLENNEEYSKKVVLHQIGMSVRARPQDYEQTTAEV 512          
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: A0A1Z5JS81_FISSO (Trehalose 6-phosphate synthase/phosphatase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JS81_FISSO)

HSP 1 Score: 241 bits (614), Expect = 1.190e-68
Identity = 125/308 (40.58%), Postives = 178/308 (57.79%), Query Frame = 1
Query:   64 KALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAA------------------ITQG------------WQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTH-LHSQETG--LIQIVHGAKPTILTARHAGVDPDAVRASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESV 888
            + LL  NCVPV++   +  + Y  +CKGVLWPV+H +  +Y + P     D A                  + QG            W AY  VNR F +KVV+ FHEGD++W+HGFHL +LP++L R + +A++G+FLHTPFP  E+FR L  REDLLRGML ADQVGFH F  ++HF+TSCRRLLGL + +    +G   + I    +   +T+ HAG++P  +R  L  + +   VS L     D+++  GV+R+E +KG+ LKLL FE  L R P  VG++ + +VGI    RG D+   +   
Sbjct:  316 ECLLPFNCVPVWVDPILFGEMYNGFCKGVLWPVLHNVTSVYSNGPEDDNGDGASKISEVDGNEFSEYSLDDVEQGPIHGGRGREAELWAAYTAVNRQFAEKVVQCFHEGDLVWVHGFHLLILPSYLTRRIPMAKVGIFLHTPFPSSEIFRTLWCREDLLRGMLNADQVGFHLFEYARHFLTSCRRLLGLHYGMIPDASGGHTLAIDTAGRNVAVTSIHAGIEPPVLRQVLIHQSTMERVSSLRTQFPDKIIFCGVDRLESLKGIPLKLLGFERFLTRCPEWVGKIVLIQVGIKAFERGEDFHRTESET 623          
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: A0A6A5AEY3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AEY3_9STRA)

HSP 1 Score: 234 bits (597), Expect = 2.790e-68
Identity = 108/274 (39.42%), Postives = 172/274 (62.77%), Query Frame = 1
Query:   49 QPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILTARHAGVDPDAVRASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYR 870
            Q  + + +   +CVPVF+  +++ Q ++S+C G LWP+MH ++++Y  LP    + +     W +Y  VNR F +KV+EV++EGD++W+HG HL V P+FL R +    +GLFLHTPFP  E+FR L  R DLLRGML AD +GFH +  ++HF+TSCRR+LGL + ++Q  G I + +  +   +T  H G++P  V     ++    E +RL  L+G + +V GV++VE++KG+ LK+L+ E   R  P     V + ++GI + A  S+ +
Sbjct:   20 QDKLARQMHAYHCVPVFIDPAMS-QTFHSFCYGTLWPIMHNIVDVYGKLPTRWWNPSQQKNAWSSYMHVNRIFVNKVIEVYNEGDLVWVHGLHLLVAPSFLSRRLPYVNVGLFLHTPFPSSEIFRTLSVRADLLRGMLSADHIGFHLYEHARHFLTSCRRILGLKY-NAQAGGYIGVEYNGRMVAITISHIGIEPPFVDRLSVKDQVLHETARLRALYGAKKIVVGVDQVERLKGITLKMLSLEQFFRTNPAYRDTVQVVQIGIVDGADTSEAK 291          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G011_ECTSI4.410e-19293.24Trehalose 6-phosphate synthase, family GT20 / Treh... [more]
A0A6H5L492_9PHAE2.790e-9597.24GT20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A7S3XSU4_HETAK4.910e-8346.91Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
V5K3Y9_SACJA2.980e-7944.93Trehalose-6-phosohate synthase n=1 Tax=Saccharina ... [more]
A0A7S2F9H1_9STRA1.030e-7641.03Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2UVC1_9STRA5.360e-7644.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K8YR86_NANGC3.830e-7444.48Alpha,alpha-trehalose-phosphate synthase (UDP-form... [more]
A0A7S2BW05_9STRA1.380e-7044.12Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1Z5JS81_FISSO1.190e-6840.58Trehalose 6-phosphate synthase/phosphatase n=2 Tax... [more]
A0A6A5AEY3_9STRA2.790e-6839.42Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11101contigEcto-sp13_S_contig11101:942..5145 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score567.8
Seed ortholog evalue3e-159
Seed eggNOG ortholog2880.D7G011
Model size888
KEGG rclassRC00005,RC00017,RC00049,RC02748
KEGG koko:K16055
KEGG ReactionR02737,R02778
KEGG Pathwayko00500,ko01100,map00500,map01100
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.trehalose biosynthetic process
EggNOG OGsCOG1877@1,KOG1050@2759
Ec32 ortholog descriptionTrehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
Ec32 orthologEc-22_003320.1
EC2.4.1.15,3.1.3.12
Cds size879
COG Functional cat.G
CAZyGT20
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11101.960.1prot_Ecto-sp13_S_contig11101.960.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11101 951..5145 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462576.145914-UTR-Ecto-sp13_S_contig11101:941..9501681462576.145914-UTR-Ecto-sp13_S_contig11101:941..950Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig11101 942..950 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462576.1607943-CDS-Ecto-sp13_S_contig11101:950..11001681462576.1607943-CDS-Ecto-sp13_S_contig11101:950..1100Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11101 951..1100 +
1681462576.1747887-CDS-Ecto-sp13_S_contig11101:1511..16281681462576.1747887-CDS-Ecto-sp13_S_contig11101:1511..1628Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11101 1512..1628 +
1681462576.1873217-CDS-Ecto-sp13_S_contig11101:2764..28541681462576.1873217-CDS-Ecto-sp13_S_contig11101:2764..2854Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11101 2765..2854 +
1681462576.1953282-CDS-Ecto-sp13_S_contig11101:3334..34421681462576.1953282-CDS-Ecto-sp13_S_contig11101:3334..3442Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11101 3335..3442 +
1681462576.2036002-CDS-Ecto-sp13_S_contig11101:3758..38451681462576.2036002-CDS-Ecto-sp13_S_contig11101:3758..3845Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11101 3759..3845 +
1681462576.2123506-CDS-Ecto-sp13_S_contig11101:4450..47041681462576.2123506-CDS-Ecto-sp13_S_contig11101:4450..4704Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11101 4451..4704 +
1681462576.221069-CDS-Ecto-sp13_S_contig11101:5072..51451681462576.221069-CDS-Ecto-sp13_S_contig11101:5072..5145Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11101 5073..5145 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11101.960.1

>prot_Ecto-sp13_S_contig11101.960.1 ID=prot_Ecto-sp13_S_contig11101.960.1|Name=mRNA_Ecto-sp13_S_contig11101.960.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=293bp
MVRLWYGYGTVIRQPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWP
VMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMI
WIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGM
LGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILT
ARHAGVDPDAVRASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVW
LKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESV
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mRNA from alignment at Ecto-sp13_S_contig11101:942..5145+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11101.960.1 ID=mRNA_Ecto-sp13_S_contig11101.960.1|Name=mRNA_Ecto-sp13_S_contig11101.960.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4204bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11101:942..5145+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGTGCGGTTATGGTACGGTTATGGTACGGTTATGGTACGGTTATCCGCCA GCCTGCGGTGGTGAAGGCCCTTCTGAAGCTCAACTGCGTCCCGGTTTTCC TGACCAAGTCGATCACACATCAGTGCTACTACAGCTACTGCAAAGGAGTC CTGTGGCCGGTAAGACCCCTTACCCTCTGGGTTCCTGTCATTGGTCCCCC CTCCGCGTGTTTATGAAGTACGGGTAGTCGACGGGCAGTAGAAAACAACT GGTGTATTCCTTGTTTGGGGTGTGTGTAACTTCACACGTCATGGTTCATC CCTTGTAGATCCCACGTTCCGTCACTTGACACTCGACGGTGTTGAATGTT TTTGTTCGCCACCCGCCCGGGCAGGTAGGTGATGCACGCACGCGGCAATG GGGATGTCCTGTAGGCGAGACGTGCCAAGAGTCCTTGCCCAATAATTTCC GCACTTGGTCGTATCATGTGTTGTACGAACGGCATGGCGTTCGTATGGTA TCGCTTACCGGGCGTTGCCAACAGCGCTGATTCTAGTGCGTCACCCATCA CTTGCTTGTACATGGTGAAGGTGATGCACGGCATGCTGGAGATGTACGAC GACCTCCCGAACTCCCTCTTAGACGACGCGGCGATCACGCAAGGATGGCA AGCTTACAAGCAGGTCAACCGCGCCTTCAGGGACAAGGTGAGTACACAGC AGAGAGTAGGTCCCTGTTTTGTTCCGGACCAGAGTATGTGCTAAGAAAAG TTGCCGACACTATTCCGGACACCAGCAGTATTGGGACAGTGATCTATACC ATTCTATTCGAAACATTGCGACCATTAGGATAGTCACATTAGTATCCCAA TGGTCCTCATGTTTCTGAACAGAGTGCGCCTTCAGGGACAAGGTCAGGAT AGAGCAGAGTAAAGCCATACAGAAGCCGAAATCAATCCACTAGACCAGTC TACTCGGAAGTGAAAGTGACGGGACTCACGAACCCACGACTTATTTTATA CAAGCCGAAATCAAACCATTAGAACTAGTCAGCCTTGACTAGTCTAATGG TTTAAATTTCGGCTTCTATAGGCCCCTGTTTCGTGCCAGAACAGACCAGA AAATCACCGACACTATGCAGGACACTAGCACTATTCAGGGACAGTGGTGT GTACCACTCTATTCTGAAATATAGGGGCCATTGGGATAATCACATCAGTC CCGGAATGGTCCTCATATTTCCGAACAGAGTGGTATCATAGGTTTTAGCA AGGAGTGGACACTCCTGCCCACATTTTTGACCAGCACTATTCAGCCCGCA CGCACCAAGCAAGGACCTCCGCTGTATTAAAGTATGATACTTTCACCTTA CAACCAGCACTCCACGTGACAGATGGTATGCCGTATTCTTTTCGTGCAGT GTACACGAACGGCCCGTGCACGCAACAATATGATGGGTTGGCGGTTTTTT CTTGTGGTATTTGCCAAGAAGGCGATTTTTTTCAGCCTTTCGGGGATGGA AAACATATTGAAGATATAGGAGCTTGCGTCCGCTCAGGGGCATTGGACTG TCGTACCTCGCTCTAGTCCATACATCGAATGGCCACGTGTCTGATGTCCT AAGTTGGTGGCTTCGCCATGTTCTTCCGACATTGAAACACAGAAGCGGCT TAGAATATTTCGGGGTTGAAAAGAAGGCAATCATCCATAGAGCTGTGAAG CGCAAGATCGTGACGTGCACGTAGGTGTGCTTGGCATGGTCTACGTAGTG TACACCCTGCTGATGGTTGTTCCGTGCTTTCCCCAACAACTAATCACGTG CATGCAATCATGATATCCATCAGGTTGTGGAGGTGTTCCACGAGGGGGAC ATGATCTGGATTCACGGCTTCCACCTGGCCGTTCTACCCGCGTTCCTCGA CAGGACTGTCAAGGTGACGTCACCAACAAGGATGACGGTACCAAAGGATA CGCCTTTGCATTCGCATTTTTTCCTTCTTGCAAATTACACACCAAAATCC GTCTCTTCCACAGATACGATAGGATAACTGTGCGTGGTAGATTACATTAA ATTAGGAACCAGTGATTGTTTTGGTTGTCAATCCATCGGTTTGCGATGGG TGACGTCACCAGTAAACTTGGTGTTTACACAGGACCCACCGTTGCATGTG TGTGTCTTTCCTCACCAATCCTTCGGTGTAACGCCGTGGCTCGCAATGTG CTGCTCACCACACGGCCTGTGCCTTGTCTGTTATAGGGGGGCACGCAGAA TATCTTGCAGAAGCGTATATGGGTGAGTTTGTTTAACACCCTAACGAGGC ACTAAAGAAACTGCGTTATTCCCATGCAACCATGTCGAACCATGAAAGAG AGATGCTGATTACGTGCTTCCGCTGGGTCCGGGGGCTTCGCAGGTTGCTC GCATTGGACTATTCCTGCACACCCCCTTCCCCCCCGGCGAGGTGTTTCGC GCTCTGCCCCACAGAGAAGATCTCCTTCGCGGGATGCTCGGTGCTGACCA GGTGTGTTCACCGACAGGTAGCCACAGCATACATGGGTGTGGTGGCGACA GTCAAGCCTTGCTGATCAGGCGTGTTCACCAACGGGTAGCCGTAGCATAC ATGGCTTTTGTTTTGTCTGTCAACGTGCTGGTCAGATGTGTTCATCAACA AGTAGCATTTATGGATTTTGTTCTGATAGTCAGGCCTTGCAGATCACGTG TCTTTCACCTACATGTAGCTTTGCCACGTCATAGAATGAGTGAGTGTTGT TGTTGCGTCAGTCAGACCCGTTGATGAGATGAAATAGCGCGATCGGTCCT CCTCTCGTCTTGGCCAGGTTGGGTTCCACCGGTTCTCAGACAGCCAGCAC TTCATGACGTCATGCCGTCGCCTGCTGGGCCTCACTCACCTTCACAGTCA AGAGGTGCGGCTCCACAATGACGTGCACCGACCACGCCTACTGTACGCAC TGTAGGCCCATGGAGAGAAGAGCGGCCCCTGGCACGGGCTCCGCTTTTTG TTTCAGAGGGGGGGTGTACTCATCGCCGTCCATGCGGAATGATAAGTCGG TAGACCATCGACATGGCATCCCTACAAGGCCGGGACGCAGCACTATTTTT AGGGAGAACGGGTAATTTAGCCCCAGGCTAGTATTCCTTGCACGAGTTGT TCTGACGGGTTGTGGTATCATAGTACCCTGTTGCGAACATCTCGTTGGAT AGGCAGAAACGGTTGGCCCTCTCCGGTACCTCTAGCGAAAAGAAAACATG GCTTGGGAGTGTCGCTTGAGCGATGCGGGAAGGCGGATACGGCGGACCAT CACGTGTCGACCACCCCATCTGCTCCCGCCGGCTTGTGCCTGCATGTCGT CACGCCAAGGTCTGTTCATTTTCTTCGGACCAATTTGTGCAAAATGTTTC TTTTTCTTTTACGTAGGGTTTGGGTTGAGCGGCTTCTCTTGATCTCACGC CAACTTCGTTCCTTTCTCTCTCTCCCTCTGCCGCTCCCTTCCTCTACGTA CTACACCAGACGGGACTGATCCAGATCGTACACGGAGCGAAGCCGACAAT CCTCACGGCCAGACACGCCGGAGTAGACCCGGATGCCGTCAGGGCCTCGC TTCAAGAAGAGGGCTCGAAGGCGGAAGTGTCCCGCCTGACCGGTCTACAC GGTGATCGCGTCGTGGTAGCGGGGGTGGAGAGGGTGGAGAAGATCAAGGG TGTGTGGCTTAAGCTACTGGCGTTCGAGGACATGCTGAGGCGGTACCCTG GTCTGGTTGGAAGGTGAGCTGACCTATTGTAGCTTGGGGTGCTGCTGCTT CTGCGGCTGCTGCTGATGGTGGTTGTGATGTTGATGGTGATATGGCTGTG GCGCTTTTACTGCTAGAGTGTCGTAGGAAGCGAAGAGATGGAACCGGTCG GGGGAGATGGCACAGGGGTGCTAATGAAGAAACAAGAACGGAATACTTGA AGTCGATTTCCGCACGGGGGTCGGTGCGATCGCTGCTGCTGCTGCGGCGG CGGCGGCTGCTGATGGTGATGGGGGCATAGCGGTTTTACTGCTAAAATGC TTCTGTTGGCGATTCTCCAATGTGAAATTAGCTCTTTTTCATGCTCCCGT GTTGCATGGATGTTTGTGTTCGCTCTGACAGGGTGAGCATGCACGAGGTG GGTATCGCCAATCCGGCTAGGGGGAGCGACTACCGGGCATGCCAAGAGTC GGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11101:942..5145+

>mRNA_Ecto-sp13_S_contig11101.960.1 ID=mRNA_Ecto-sp13_S_contig11101.960.1|Name=mRNA_Ecto-sp13_S_contig11101.960.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=879bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11101:942..5145+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTACGGTTATGGTACGGTTATGGTACGGTTATCCGCCAGCCTGCGGT
GGTGAAGGCCCTTCTGAAGCTCAACTGCGTCCCGGTTTTCCTGACCAAGT
CGATCACACATCAGTGCTACTACAGCTACTGCAAAGGAGTCCTGTGGCCG
GTGATGCACGGCATGCTGGAGATGTACGACGACCTCCCGAACTCCCTCTT
AGACGACGCGGCGATCACGCAAGGATGGCAAGCTTACAAGCAGGTCAACC
GCGCCTTCAGGGACAAGGTTGTGGAGGTGTTCCACGAGGGGGACATGATC
TGGATTCACGGCTTCCACCTGGCCGTTCTACCCGCGTTCCTCGACAGGAC
TGTCAAGGTTGCTCGCATTGGACTATTCCTGCACACCCCCTTCCCCCCCG
GCGAGGTGTTTCGCGCTCTGCCCCACAGAGAAGATCTCCTTCGCGGGATG
CTCGGTGCTGACCAGGTTGGGTTCCACCGGTTCTCAGACAGCCAGCACTT
CATGACGTCATGCCGTCGCCTGCTGGGCCTCACTCACCTTCACAGTCAAG
AGACGGGACTGATCCAGATCGTACACGGAGCGAAGCCGACAATCCTCACG
GCCAGACACGCCGGAGTAGACCCGGATGCCGTCAGGGCCTCGCTTCAAGA
AGAGGGCTCGAAGGCGGAAGTGTCCCGCCTGACCGGTCTACACGGTGATC
GCGTCGTGGTAGCGGGGGTGGAGAGGGTGGAGAAGATCAAGGGTGTGTGG
CTTAAGCTACTGGCGTTCGAGGACATGCTGAGGCGGTACCCTGGTCTGGT
TGGAAGGGTGAGCATGCACGAGGTGGGTATCGCCAATCCGGCTAGGGGGA
GCGACTACCGGGCATGCCAAGAGTCGGTG
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