mRNA_Ecto-sp13_S_contig11101.960.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: D7G011_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G011_ECTSI) HSP 1 Score: 570 bits (1468), Expect = 4.410e-192 Identity = 276/296 (93.24%), Postives = 282/296 (95.27%), Query Frame = 1
Query: 1 CAVMVRLWYGYGTVIRQPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILTARHAGVDPDAVRASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESV 888
C V W + QPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLA+LPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGL+QIVHGAKPTILTARHAGVDPDAVRASL+EEGS+ EV RLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQES+
Sbjct: 125 CGGWVAEWDHEQLIAMQPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAILPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLVQIVHGAKPTILTARHAGVDPDAVRASLREEGSREEVDRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESL 420
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: A0A6H5L492_9PHAE (GT20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L492_9PHAE) HSP 1 Score: 299 bits (765), Expect = 2.790e-95 Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 1
Query: 49 QPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGF 483
+ AVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLA+LPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQV F
Sbjct: 353 KAAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAILPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVCF 497
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: A0A7S3XSU4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSU4_HETAK) HSP 1 Score: 265 bits (678), Expect = 4.910e-83 Identity = 129/275 (46.91%), Postives = 182/275 (66.18%), Query Frame = 1
Query: 67 ALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILTARHAGVDPDAVRASLQEE-GSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESV 888
AL +CVPV+L + + Y +CKGVLWPV H ML++Y D D + W AY QVNR FRD++VEV+++ D++W+HGFHL ++P+FL R+V VA++GLFLHTPFP E+FR LP REDLLRGML ADQ+GFH + S+HF+T C RLLGLTH TG I++ + + ++T+ HAGVDP+ A L++E G AEV+ L + V G+++VE++KG+ LKL+ + L R P VG+V +H+VG++ DY + V
Sbjct: 85 ALQPFDCVPVWLEADLAEKFYSGFCKGVLWPVFHNMLDVYGDAAVDFWDAQHLDGLWFAYTQVNRKFRDRIVEVYNDRDLVWVHGFHLLLVPSFLSRSV-VAKVGLFLHTPFPSSEIFRTLPFREDLLRGMLVADQIGFHVYEYSRHFLTCCVRLLGLTH-EQGPTGQIEVRYNGRQVLVTSVHAGVDPEVFEAILRDEAGVAAEVAALQARAAGKFVFLGLDKVERLKGLQLKLVGYARFLERNPDAVGKVLLHQVGLSASELQQDYNSSAAEV 357
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: V5K3Y9_SACJA (Trehalose-6-phosohate synthase n=1 Tax=Saccharina japonica TaxID=88149 RepID=V5K3Y9_SACJA) HSP 1 Score: 271 bits (692), Expect = 2.980e-79 Identity = 124/276 (44.93%), Postives = 174/276 (63.04%), Query Frame = 1
Query: 49 QPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILTARHAGVDPDAVRASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRAC 876
+ AV KALL +CVPVFL +S+ + Y +CKGVLWPV H ++++Y D + WQAY VNR FRDK+VEV++EGDM+W+HGFHL +LP+FL R ++ AR+GLFLHTPFP E+FR LP REDLLRGML ADQ+GFH F ++HF+T C+R+LGL S G + + + + + H G++P + A+L G + L + R V G+++VE++KG+ LK AF L P L ++ + +VGI+ R DY C
Sbjct: 232 EEAVAKALLPFSCVPVFLERSLAQKFYRDFCKGVLWPVFHHVVDVYGDQVMRFFAQDVLADLWQAYANVNRRFRDKIVEVYNEGDMVWVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYARHFLTCCKRILGLNEGDSNNRGNTNVFYNGRCVSIESMHGGIEPSIIAANLSNPGIVGRAAELRKEYQGRFVFLGIDKVERLKGLQLKFTAFYKFLLERPHLADKIVLLQVGISALEREQDYHKC 507
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: A0A7S2F9H1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9H1_9STRA) HSP 1 Score: 251 bits (642), Expect = 1.030e-76 Identity = 119/290 (41.03%), Postives = 179/290 (61.72%), Query Frame = 1
Query: 49 QPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLP---------NSLLDDAAITQ-GWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILTARHAGVDPDAVRASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESV 888
Q + L + NCVP+++ + H + ++CK LWPV H +LE+Y +P N+ + + Q W AY V R F+ ++E++H+GD+IWIHGFHL +LP FL R + +A+IGLFLHTPFP E+FR L R+DLLRGML ADQ+GFH + ++HF+T CRR+LGL H E I + +G + ++T HAG+D + + + LQ + + +++ L D+ V AG++R+E++KGV LKLLAFE L + P G V ++++ +A RG DY V
Sbjct: 30 QDELTSILEQFNCVPIYIDPELHHAFFSTFCKQTLWPVFHNLLEIYGPVPTGQAAREAGNAFREGSRPEQDAWSAYTSVQRIFKKTIIEMYHDGDLIWIHGFHLLLLPTFLSRQLHMAKIGLFLHTPFPSSEIFRTLSKRDDLLRGMLSADQIGFHLYEYARHFLTCCRRILGLEWTH--ERNGINVHYGGRSVLITCIHAGMDQEVLHSVLQTQDVQRDINDLMRKTKDKTVFAGIDRMERLKGVPLKLLAFERFLEKNPTRAGNVVLYQISLAVRERGDDYSTTSAQV 317
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: A0A7S2UVC1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVC1_9STRA) HSP 1 Score: 258 bits (658), Expect = 5.360e-76 Identity = 121/275 (44.00%), Postives = 176/275 (64.00%), Query Frame = 1
Query: 64 KALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILTARHAGVDPDAVRASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESV 888
+AL +CVPV+L +++ + Y +CKGVLWP+ H ++++Y DL D + WQAY VNR FRDK+VEV++E D+IWIHGFHL ++P+FL R + VA++GLFLHTPFP E+FR LP REDLLRG+L ADQVGFH + S+HF+TSC R+LGL G + I + + + + HAGVDPD V L + E+ +L + + +++VE+++G+ LKL +E L+ P LV +V + +VG+ P R D+ C + V
Sbjct: 18 QALAVFDCVPVWLDEALATKFYQEFCKGVLWPIFHNVVDIYGDLSTHFWDSDTLGTAWQAYMMVNRQFRDKIVEVYNECDLIWIHGFHLLLVPSFLSRVLHVAKVGLFLHTPFPSSEIFRTLPFREDLLRGILNADQVGFHLYEHSRHFLTSCVRILGLPS-GPDGRGHMAITYNGRDVNVNSTHAGVDPDKVADVLAMPEVEEEMRQLEEAFSGKFLFVSIDKVERLRGLQLKLNGYERFLKENPELVDKVVLLQVGLNAPERDKDFSRCLDEV 291
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: K8YR86_NANGC (Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YR86_NANGC) HSP 1 Score: 256 bits (655), Expect = 3.830e-74 Identity = 125/281 (44.48%), Postives = 177/281 (62.99%), Query Frame = 1
Query: 49 QPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILTARHAGVDPDAVR-ASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESV 888
Q ++ +AL K +CVPVF+ I + Y ++CKG LWPV H +L++Y P D W +Y VN FRDKVVEV++EGD+IWIHGFHL VLP+F+ +++ A+ GLFLHTPFP E+FR L REDLLRGML AD +GFH + ++HF+T RR+LG+T + E G + + + + +++ H GVD A+R L E + EV +L R V+ G++R+E+I+G+ LKLLAFE L +P G+V + +VGI RG DY + V
Sbjct: 379 QESLARALRKFDCVPVFIDPEIHDKFYNTFCKGTLWPVFHHILDVYGSRPTRFWDQKTQDSVWHSYSHVNMRFRDKVVEVYNEGDLIWIHGFHLLVLPSFITKSLPTAKTGLFLHTPFPSSEIFRTLSVREDLLRGMLNADHIGFHLYEYARHFVTCVRRILGVT--YDMEGGQMAVHYNGRTVAISSIHVGVDSAAIRHLMLAEPEMQLEVDKLRQQFAGRKVILGIDRLERIRGIPLKLLAFERFLATHPEWKGKVVLFQVGITASERGEDYPRTKREV 657
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: A0A7S2BW05_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BW05_9STRA) HSP 1 Score: 245 bits (626), Expect = 1.380e-70 Identity = 120/272 (44.12%), Postives = 175/272 (64.34%), Query Frame = 1
Query: 76 KLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSL-LDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILTARHAGVDPDAVRASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESV 888
K +CVP+FL + +H CY +CKGVLWPV H +LE+ ++ + + +GW AY V R F+ ++E F+EGD+IWIHGFHL +LP+FL R VA+IGLFLHTPFP E+F L RED+LR ML AD +GFH + ++HF+T CRR+LGL +H + TG I +++G + +++ HAG+DP A+ +L++ + E RL L R + G++R+E++KGV LKLLAFE L +V +H++G++ AR DY V
Sbjct: 244 KFHCVPIFLDEKTSHTCYQVFCKGVLWPVFHNLLEVMSTENAAVQFSNKSGDEGWLAYTTVQRVFKKAIIEHFNEGDLIWIHGFHLLLLPSFLSRGF-VAKIGLFLHTPFPSSEIFCTLSKREDILRSMLNADHIGFHVYEYARHFLTCCRRVLGLEWVH-EGTG-IHVLYGGRKVLISCMHAGMDPSALYKALEDHQVQKEADRLNCLKRGRTMFVGMDRMERLKGVPLKLLAFERFLENNEEYSKKVVLHQIGMSVRARPQDYEQTTAEV 512
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: A0A1Z5JS81_FISSO (Trehalose 6-phosphate synthase/phosphatase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JS81_FISSO) HSP 1 Score: 241 bits (614), Expect = 1.190e-68 Identity = 125/308 (40.58%), Postives = 178/308 (57.79%), Query Frame = 1
Query: 64 KALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAA------------------ITQG------------WQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTH-LHSQETG--LIQIVHGAKPTILTARHAGVDPDAVRASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESV 888
+ LL NCVPV++ + + Y +CKGVLWPV+H + +Y + P D A + QG W AY VNR F +KVV+ FHEGD++W+HGFHL +LP++L R + +A++G+FLHTPFP E+FR L REDLLRGML ADQVGFH F ++HF+TSCRRLLGL + + +G + I + +T+ HAG++P +R L + + VS L D+++ GV+R+E +KG+ LKLL FE L R P VG++ + +VGI RG D+ +
Sbjct: 316 ECLLPFNCVPVWVDPILFGEMYNGFCKGVLWPVLHNVTSVYSNGPEDDNGDGASKISEVDGNEFSEYSLDDVEQGPIHGGRGREAELWAAYTAVNRQFAEKVVQCFHEGDLVWVHGFHLLILPSYLTRRIPMAKVGIFLHTPFPSSEIFRTLWCREDLLRGMLNADQVGFHLFEYARHFLTSCRRLLGLHYGMIPDASGGHTLAIDTAGRNVAVTSIHAGIEPPVLRQVLIHQSTMERVSSLRTQFPDKIIFCGVDRLESLKGIPLKLLGFERFLTRCPEWVGKIVLIQVGIKAFERGEDFHRTESET 623
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Match: A0A6A5AEY3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AEY3_9STRA) HSP 1 Score: 234 bits (597), Expect = 2.790e-68 Identity = 108/274 (39.42%), Postives = 172/274 (62.77%), Query Frame = 1
Query: 49 QPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPVMHGMLEMYDDLPNSLLDDAAITQGWQAYKQVNRAFRDKVVEVFHEGDMIWIHGFHLAVLPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGLTHLHSQETGLIQIVHGAKPTILTARHAGVDPDAVRASLQEEGSKAEVSRLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYR 870
Q + + + +CVPVF+ +++ Q ++S+C G LWP+MH ++++Y LP + + W +Y VNR F +KV+EV++EGD++W+HG HL V P+FL R + +GLFLHTPFP E+FR L R DLLRGML AD +GFH + ++HF+TSCRR+LGL + ++Q G I + + + +T H G++P V ++ E +RL L+G + +V GV++VE++KG+ LK+L+ E R P V + ++GI + A S+ +
Sbjct: 20 QDKLARQMHAYHCVPVFIDPAMS-QTFHSFCYGTLWPIMHNIVDVYGKLPTRWWNPSQQKNAWSSYMHVNRIFVNKVIEVYNEGDLVWVHGLHLLVAPSFLSRRLPYVNVGLFLHTPFPSSEIFRTLSVRADLLRGMLSADHIGFHLYEHARHFLTSCRRILGLKY-NAQAGGYIGVEYNGRMVAITISHIGIEPPFVDRLSVKDQVLHETARLRALYGAKKIVVGVDQVERLKGITLKMLSLEQFFRTNPAYRDTVQVVQIGIVDGADTSEAK 291 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11101.960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11101.960.1 >prot_Ecto-sp13_S_contig11101.960.1 ID=prot_Ecto-sp13_S_contig11101.960.1|Name=mRNA_Ecto-sp13_S_contig11101.960.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=293bp MVRLWYGYGTVIRQPAVVKALLKLNCVPVFLTKSITHQCYYSYCKGVLWPback to top mRNA from alignment at Ecto-sp13_S_contig11101:942..5145+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11101.960.1 ID=mRNA_Ecto-sp13_S_contig11101.960.1|Name=mRNA_Ecto-sp13_S_contig11101.960.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4204bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11101:942..5145+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11101:942..5145+ >mRNA_Ecto-sp13_S_contig11101.960.1 ID=mRNA_Ecto-sp13_S_contig11101.960.1|Name=mRNA_Ecto-sp13_S_contig11101.960.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=879bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11101:942..5145+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |