prot_Ecto-sp13_S_contig1007.93.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1007.93.1
Unique Nameprot_Ecto-sp13_S_contig1007.93.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length400
Homology
BLAST of mRNA_Ecto-sp13_S_contig1007.93.1 vs. uniprot
Match: A0A6H5JKX0_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKX0_9PHAE)

HSP 1 Score: 363 bits (933), Expect = 9.410e-112
Identity = 318/382 (83.25%), Postives = 326/382 (85.34%), Query Frame = 0
Query:    1 MSRRPVARGDASSASVPTNPHGGGFGDARRSSIDRGRRRKTGTKLGGGTPGGSTLARLLRLLSIVLVAVALSQADVVDEDREYLGILYTSLGGSDWHENANWTVSGVDVSEWEGVSVATDENGTEYVYEISLGDNNLVGDAFPAVEYGQLLGLQKLSLGGNDITGELPAGLENLVSLTLLDLSDNGFQGEIPPELGSAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNIGLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGGELQAVDIRNXXXXXXXXEGLEQVSTLLLDGNFVDGYEQRADDSTAPPYPTPAXXXXXXXXXXXIAXXXXXXXXXSLSPSRAPT 382
            M RRPVARGD SSASVPTN  G GFGD RR++IDRGRRR TG K  GGTPGGST ARLLRLLSI   AVA SQADVV EDREYLGILYTSLGGS+WHENANWTVSGVDVSEWEGVSVATDENGTEYVYEISLGDNNL+GDAFPAVEYGQLLGLQKLS+GGNDITGELPAGLENLVSLTL                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     SGN GLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGGELQAVD+RN        EGLEQVS LLLDGNFVDGYEQRADDSTAPPYP+P XXXXXXXXXXX  XXXXXXXXXSLSP R+PT
Sbjct:    1 MGRRPVARGDTSSASVPTNRQGRGFGDGRRNNIDRGRRRITGAKHSGGTPGGSTFARLLRLLSIFFAAVACSQADVVVEDREYLGILYTSLGGSNWHENANWTVSGVDVSEWEGVSVATDENGTEYVYEISLGDNNLIGDAFPAVEYGQLLGLQKLSVGGNDITGELPAGLENLVSLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQLDLSGNTGLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGGELQAVDLRNNYLTGEVPEGLEQVSALLLDGNFVDGYEQRADDSTAPPYPSPVXXXXXXXXXXXXXXXXXXXXXXSLSPPRSPT 382          
BLAST of mRNA_Ecto-sp13_S_contig1007.93.1 vs. uniprot
Match: D7FHC3_ECTSI (Amino acid-binding ACT/ Hypothetical leucine rich repeat kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHC3_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 2.000e-109
Identity = 312/380 (82.11%), Postives = 315/380 (82.89%), Query Frame = 0
Query:    1 MSRRPVARGDASSASVPTNPHGGGFGDARRSSIDRGRRRKTGTKLGGGTPGGSTLARLLRLLSIVLVAVALSQADVVDEDREYLGILYTSLGGSDWHENANWTVSGVDVSEWEGVSVATDENGTEYVYEISLGDNNLVGDAFPAVEYGQLLGLQKLSLGGNDITGELPAGLENLVSLTLLDLSDNGFQGEIPPELGSAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNIGLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGGELQAVDIRNXXXXXXXXEGLEQVSTLLLDGNFVDGYEQRADDSTAPPYPTPAXXXXXXXXXXXIAXXXXXXXXXSLSPSRA 380
            M RR VARG  SSASVPTN  G GFGD RRS  D  RR  TG KLGG TP GSTLARLLRLLSIVL AVA  QADVVDEDREYLGILYTSLGGSDWH+NANWTVSGVDVSEWEGVSVATDENGTEYVYEISLGDN+LVGDAFPAVEYGQLLGLQKLSLGGNDITGELPAGLENLVSLTL                     XXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXX      SGN GLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGGELQAVD+RN        EGLEQVSTLLLDGNFVDGYEQRADDSTAPPYPTPAXXXXXXXXXXX  XXXXXXXXXSLSPSRA
Sbjct:    1 MGRRLVARGGTSSASVPTNQQGRGFGDERRSRCDVRRRGITGAKLGGDTPVGSTLARLLRLLSIVLAAVAFGQADVVDEDREYLGILYTSLGGSDWHDNANWTVSGVDVSEWEGVSVATDENGTEYVYEISLGDNHLVGDAFPAVEYGQLLGLQKLSLGGNDITGELPAGLENLVSLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMAQVGIXXXXXXXXXXXXXXXXXXXXXLTQLDLSGNTGLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGGELQAVDLRNNYLTGEAPEGLEQVSTLLLDGNFVDGYEQRADDSTAPPYPTPAXXXXXXXXXXXXXXXXXXXXXXSLSPSRA 380          
BLAST of mRNA_Ecto-sp13_S_contig1007.93.1 vs. uniprot
Match: Y1931_DICDI (Putative leucine-rich repeat-containing protein DDB_G0281931 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Y1931_DICDI)

HSP 1 Score: 67.0 bits (162), Expect = 3.370e-8
Identity = 37/124 (29.84%), Postives = 67/124 (54.03%), Query Frame = 0
Query:   70 ALSQADVVDEDREYLGILYTSLGGSDWHENANWTVSGVDVSEWEGVSVATDENG-TEYVYEISLGDNNLVGDAFPAVEYGQLLGLQKLSLGGNDITGELPAGL-ENLVSLTLLDLSDNGFQGEI 191
            +L+   +V  ++  L  LY+   G DW +N NW      +++W G+   + + G T  V  I +  NN+VG+   + E   L+ LQ L +  N   GE+P G+ + + +L+ + L++N FQG++
Sbjct:   73 SLTTIPLVSNEKIILEKLYSDWNGKDWDDNTNWLNGDPCMNQWYGIECNSFDGGITNNVISIKMSLNNIVGEM--STEIKNLVHLQTLDISNNGFYGEIPIGIFQQMNNLSYISLNENEFQGDL 194          
BLAST of mRNA_Ecto-sp13_S_contig1007.93.1 vs. uniprot
Match: A0A432CIK1_9FLAO (Two component regulator three Y domain protein n=2 Tax=Flavobacterium TaxID=237 RepID=A0A432CIK1_9FLAO)

HSP 1 Score: 63.2 bits (152), Expect = 1.620e-7
Identity = 43/109 (39.45%), Postives = 60/109 (55.05%), Query Frame = 0
Query:   74 ADVVDEDREYLGILYTSLGGSDWHENANWTVSGVDVSEWEGVSVATDENGTEYVYEISLGDNNLVGDAFPAVEYGQLLGLQKLSLGGNDITGELPAGLENLVSLTLLDL 182
            ADV D++++ L  LY S  GS WH    W +S   V+ W G+ V       E V  + L DNNLVG+  PA E   L+GLQ+L L  N I+G +P  +  L  + +L+L
Sbjct:   19 ADVSDQEKDALVKLYQSTSGSQWH--VKWDLSS-PVTTWYGIKVQD-----EKVIAVHLADNNLVGE-IPA-EIVNLVGLQELDLHKNQISGSIPFFIGKLKEMKVLNL 117          
BLAST of mRNA_Ecto-sp13_S_contig1007.93.1 vs. uniprot
Match: A0A4R5CPY2_9FLAO (Two component regulator three Y domain protein n=1 Tax=Flavobacterium sandaracinum TaxID=2541733 RepID=A0A4R5CPY2_9FLAO)

HSP 1 Score: 62.4 bits (150), Expect = 2.920e-7
Identity = 44/110 (40.00%), Postives = 59/110 (53.64%), Query Frame = 0
Query:   74 ADVVDEDREYLGILYTSLGGSDWHENANWTVSGVDVSEWEGVSVATDENGTEYVYEISLGDNNLVGDAFPAVEYGQLLGLQKLSLGGNDITGELPAGLENLVSLTLLDLS 183
            A++   +RE L  LY +  G  W  N  W +S   VS W GV V  D+     V  I L DNNL+G+  PA E   L+GLQ+L L  N I+G +P  +  L  L +L+LS
Sbjct:   19 ANISQSEREVLVKLYEATNGKQW--NNKWDLSS-PVSTWYGVQVQEDK-----VISIRLADNNLIGE-IPA-EIVNLIGLQELDLHKNQISGAIPVFIGKLKELKVLNLS 118          
BLAST of mRNA_Ecto-sp13_S_contig1007.93.1 vs. uniprot
Match: A0A448Z769_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z769_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 4.190e-6
Identity = 45/129 (34.88%), Postives = 55/129 (42.64%), Query Frame = 0
Query:   75 DVVDEDREYLGILYTSLGGSDWHENANWTVSGVDVSEWEGVSVATDENGTEYVYEISLGDNNLVG---DAFPAVEYGQLLGLQKLSLGGNDITGELPAGLENLVSLTLLDLSDNGFQGEIPPELGSAPS 200
            D +D  R  L + Y    G  W     W     +  +W GV+          V  I L  NNL G   + F  +E     GLQ L L GN +  ELP+   NL SL  LD   N F GE+P  L S PS
Sbjct:  191 DYLDLQRYALLVFYFGTDGGSWTSTDGWATPSGECEDWTGVTCQK-----SLVRRIDLDKNNLHGRIPEDFCLIE-----GLQYLKLSGNKV--ELPSCXSNLSSLEELDFKGNNFAGELPIWLHSMPS 307          
BLAST of mRNA_Ecto-sp13_S_contig1007.93.1 vs. uniprot
Match: A0A1V1NRM2_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Magnetoglobus multicellularis str. Araruama TaxID=890399 RepID=A0A1V1NRM2_9DELT)

HSP 1 Score: 56.6 bits (135), Expect = 1.790e-5
Identity = 38/124 (30.65%), Postives = 59/124 (47.58%), Query Frame = 0
Query:   74 ADVVDEDREYLGILYTSLGGSDWHENANWTVSGVDVSEWEGVSVATDENGTEYVYEISLGDNNLVGDAFPAVEYGQLLGLQKLSLGGNDITGELPAGLENLVSLTLLDLSDNGFQGEIPPELGS 197
            A++ + +R+ L  +Y S GG +W  N  W        EW G+  +   N   +V  + L         FP+ +           + GN++TGELP  ++NLVSL  L LS N     +PPE+G+
Sbjct:    9 AEIPETERQALVDIYNSTGGENWRNNEGWLGEAGTECEWYGIECSYPHN--TFVQALRL--------YFPSPD-------PPHDIVGNNLTGELPESIQNLVSLKSLYLSCNKLT--LPPEIGN 113          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1007.93.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JKX0_9PHAE9.410e-11283.25Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FHC3_ECTSI2.000e-10982.11Amino acid-binding ACT/ Hypothetical leucine rich ... [more]
Y1931_DICDI3.370e-829.84Putative leucine-rich repeat-containing protein DD... [more]
A0A432CIK1_9FLAO1.620e-739.45Two component regulator three Y domain protein n=2... [more]
A0A4R5CPY2_9FLAO2.920e-740.00Two component regulator three Y domain protein n=1... [more]
A0A448Z769_9STRA4.190e-634.88Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1V1NRM2_9DELT1.790e-530.65Uncharacterized protein (Fragment) n=1 Tax=Candida... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 150..173
e-value: 220.0
score: 2.3
coord: 174..198
e-value: 21.0
score: 10.6
coord: 222..246
e-value: 34.0
score: 8.9
coord: 271..295
e-value: 130.0
score: 4.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 240..335
e-value: 2.6E-17
score: 64.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 72..239
e-value: 1.6E-36
score: 127.5
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 199..257
e-value: 1.3E-6
score: 28.0
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 104..221
coord: 228..329
coord: 180..257
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 100..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1007contigEcto-sp13_S_contig1007:1..8258 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1007.93.1mRNA_Ecto-sp13_S_contig1007.93.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1007 1..10866 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1007.93.1 ID=prot_Ecto-sp13_S_contig1007.93.1|Name=mRNA_Ecto-sp13_S_contig1007.93.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=400bp
MSRRPVARGDASSASVPTNPHGGGFGDARRSSIDRGRRRKTGTKLGGGTP
GGSTLARLLRLLSIVLVAVALSQADVVDEDREYLGILYTSLGGSDWHENA
NWTVSGVDVSEWEGVSVATDENGTEYVYEISLGDNNLVGDAFPAVEYGQL
LGLQKLSLGGNDITGELPAGLENLVSLTLLDLSDNGFQGEIPPELGSAPS
LVRLDLQGNALTGKIPSELAEMAQLGILYLQDNALEDTIPPELGNLASLT
QLDLSGNIGLIGPIPPEFGGLVSLKALYMEDNSLTGDIPAELGTLAEGGE
LQAVDIRNNYLTGDVPEGLEQVSTLLLDGNFVDGYEQRADDSTAPPYPTP
APATPVPTPAPTIATPTPTTASPSLSPSRAPTTPGPTTAALPAAATLSPT
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt