prot_Ecto-sp13_S_contig11057.927.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11057.927.1
Unique Nameprot_Ecto-sp13_S_contig11057.927.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length729
Homology
BLAST of mRNA_Ecto-sp13_S_contig11057.927.1 vs. uniprot
Match: D7G6K5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K5_ECTSI)

HSP 1 Score: 1224 bits (3168), Expect = 0.000e+0
Identity = 642/718 (89.42%), Postives = 660/718 (91.92%), Query Frame = 0
Query:   11 QPATGGAWGEPVGHWEPVEDXXXGQRWVPGVEQGPGAGADAGQPNQAPVQELERAPLHGTGQGTVEEERDEPVPVPEENGRLSAENEFRLANAYAEAYPRELARGRAVIYGEENPHFTVQRARAQQSDQLPPLLALSYFRQPRPASTSETEAAWLARAAEDWLATNQGEVNAVRRRDEAARSSLVEAFYSGDDLLRHIAAEYARSALRVAAPFTSVAATDRPRAFWSRLEQYQQQQADGEQTREPLFKWLGIVEPPPPTGDQSTWEEDDDGAVADEDAWEMPFADAEIEEETFEVLPPPRTLFTPWPSTRTGRVDLRPTPPSSRARRRALDPASRLLSATSTFGTLNLRAEVELWVAGSNIRQHGLRRLMAVQERELSKAWVALWGRRRRLDPDSKTWVDADDSGDAAVRAAARRVVFLEAHPEQACQEQGAMMKAFVRRNGTEVSRAVEEADAELAAAWERMHDNREDVDAPYSSITPPASTCPSTFDRAYAAYRKHIDTRASAALVTNSLLPTSAASATLQLRMMCRMADAWESANHRRVCAQRFADHFSGAAGAERVEQEGETLPKRLRESRAAANEDAAAFGAVVALVVAPMLIGRASQMCKCDMGAILSNAVDWVAFNGEAFEDELQRMETRLRLPPGTMAGKDIEDEGCSGGGMGRMLDGCECELESSVSSCRRLVACPIITRRILRVPEPVCPECEDGSGVFGTDLFDLFA 728
            QPAT GAWGEPV        XXX QRWVPGVEQGPGA ADA QPNQ P QELERAPLHGTGQ T+EEERDEPVPVPEENGRLSAE+EFRLANAYAEAYPRELARGRAVIYGEENPHFTVQRA AQ S QLPPLLALSYF QP PASTSETEAAWL RAAEDW  TNQGEVNAVRRRDEAARSSLVEAFYSGDDLLRHIAAEYARSALRVA PFTSVAATDRPRAFWSRLEQY QQQA+GEQ  EPLFKWLGIVEPPPPTGDQSTWEE DDGAVADEDAWE+PFADAEIE ETFEVLPPPR LFTPWPS RTGRVDLRPTPPSSR RR ALDPASRL+ ATSTFGTLNLRAEVELWVAG+NIRQ GLRRLMAVQERELSKAWVALW  RRRLDP SKTWVDADD GDAAVRAAARRVVFLEAHPEQACQEQGAMMKAFVRRNG EV +AVEEADAELAAAWERMHDN +DVDA +SS TPPAST PSTFDRAYAAYRKHIDTRASAALV NSL PTS ASATLQLR + RMADAWESANHRRVCAQRFADHFSGAAGAE+  QE E LPKRLRESRAAANEDAAAFGAVVALVVAPMLIGRASQMC+CDMGAILSNAVDWVAFNGEAFE+ELQRME RLRL PGTMAGK+++DEGCSGGGMGR+LDGCEC LESSVSSC RLVACPI+TRRILRVPEPVCPECEDGSGVFGTDLFDLFA
Sbjct:  472 QPATSGAWGEPVXXXXXXXXXXXXQRWVPGVEQGPGA-ADAWQPNQRPAQELERAPLHGTGQATIEEERDEPVPVPEENGRLSAEDEFRLANAYAEAYPRELARGRAVIYGEENPHFTVQRACAQ-SSQLPPLLALSYFHQPCPASTSETEAAWLMRAAEDWRTTNQGEVNAVRRRDEAARSSLVEAFYSGDDLLRHIAAEYARSALRVAPPFTSVAATDRPRAFWSRLEQYLQQQANGEQNGEPLFKWLGIVEPPPPTGDQSTWEEGDDGAVADEDAWEVPFADAEIEVETFEVLPPPRRLFTPWPSARTGRVDLRPTPPSSRGRRHALDPASRLVLATSTFGTLNLRAEVELWVAGTNIRQEGLRRLMAVQERELSKAWVALWSHRRRLDPVSKTWVDADDPGDAAVRAAARRVVFLEAHPEQACQEQGAMMKAFVRRNGAEVLKAVEEADAELAAAWERMHDNHDDVDASHSSTTPPASTSPSTFDRAYAAYRKHIDTRASAALVANSLPPTSVASATLQLRRIGRMADAWESANHRRVCAQRFADHFSGAAGAEKAAQEREALPKRLRESRAAANEDAAAFGAVVALVVAPMLIGRASQMCECDMGAILSNAVDWVAFNGEAFEEELQRMEARLRLSPGTMAGKNVKDEGCSGGGMGRILDGCECNLESSVSSCSRLVACPIVTRRILRVPEPVCPECEDGSGVFGTDLFDLFA 1187          
BLAST of mRNA_Ecto-sp13_S_contig11057.927.1 vs. uniprot
Match: A0A6H5JAV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAV0_9PHAE)

HSP 1 Score: 1169 bits (3025), Expect = 0.000e+0
Identity = 611/690 (88.55%), Postives = 635/690 (92.03%), Query Frame = 0
Query:   40 GVEQGPGAGADAGQPNQAPVQELERAPLHGTGQGTVEEERDEPVPVPEENGRLSAENEFRLANAYAEAYPRELARGRAVIYGEENPHFTVQRARAQQSDQLPPLLALSYFRQPRPA-STSETEAAWLARAAEDWLATNQGEVNAVRRRDEAARSSLVEAFYSGDDLLRHIAAEYARSALRVAAPFTSVAATDRPRAFWSRLEQYQQQQADGEQTREPLFKWLGIVEPPPPTGDQSTWEEDDDGAVADEDAWEMPFADAEIEEETFEVLPPPRTLFTPWPSTRTGRVDLRPTPPSSRARRRALDPASRLLSATSTFGTLNLRAEVELWVAGSNIRQHGLRRLMAVQERELSKAWVALWGRRRRLDPDSKTWVDADDSGDAAVRAAARRVVFLEAHPEQACQEQGAMMKAFVRRNGTEVSRAVEEADAELAAAWERMHDNREDVDAPYSSITPPASTCPSTFDRAYAAYRKHIDTRASAALVTNSLLPTSAASATLQLRMMCRMADAWESANHRRVCAQRFADHFSGAAGAERVEQEGETLPKRLRESRAAANEDAAAFGAVVALVVAPMLIGRASQMCKCDMGAILSNAVDWVAFNGEAFEDELQRMETRLRLPPGTMAGKDIEDEGCSGGGMGRMLDGCECELESSVSSCRRLVACPIITRRILRVPEPVCPECEDGSGVFGTDLFDLFA 728
            GVE GPGAGADAGQPNQ  VQELERAP H TGQGTVEEERDEPVPVP ENGRLSAE+EFRLANAYAEAY RELARGRA IYGEENPHFTVQRARAQ SDQLPPL ALSYFRQPRPA  TSETEAAWL RAAEDWL TNQG+VN VRRRDEAARSSLVEAFYSGDDLLRHIAAEYARSALRVAAPFTSVAATDRPRAFWSRLEQYQQQQADGEQ  EPLFKWLGIVEPPPPTGDQSTW++DDDGAVADEDAWE PFA+AEIEEETFE+LPPP+TLFT WPS RT RVDLRPTPPSS  RRRALDPASRL+SATSTFGTL LRAEVELWVAGSNIRQ GLRRLMAVQERELSKAWVALWG RRRLDP SKTWVDADDSGDAAVRAAARRVVFLEAHPEQACQEQGAMMKAF+RRNG  V +AVEEADAELAAAWERMHDNR+DVDA +SS TPPAST P+ FDRAY AYRKHIDTRASAALV NSL PT AASATLQLR + RM DAWESANHRRVCAQRFADHFSGAAGAE+  QE E LPKR RESRAAANEDA AFG VVALVVAPMLIGRASQMC+CDM AILSNAVDWVAFNGEAFE+ELQRME RL+LPPGTMAGKD ++EGCS GGMGR+LD CEC+LE SVSSC RLVACPI+TRRILRVP+PVCPECEDGSGVFGTDLFDLFA
Sbjct:  255 GVEHGPGAGADAGQPNQEAVQELERAPRHRTGQGTVEEERDEPVPVPGENGRLSAEDEFRLANAYAEAYRRELARGRAAIYGEENPHFTVQRARAQ-SDQLPPLSALSYFRQPRPAICTSETEAAWLTRAAEDWLTTNQGKVNVVRRRDEAARSSLVEAFYSGDDLLRHIAAEYARSALRVAAPFTSVAATDRPRAFWSRLEQYQQQQADGEQNGEPLFKWLGIVEPPPPTGDQSTWKDDDDGAVADEDAWEAPFANAEIEEETFEILPPPQTLFTAWPSARTERVDLRPTPPSSWGRRRALDPASRLVSATSTFGTLRLRAEVELWVAGSNIRQKGLRRLMAVQERELSKAWVALWGHRRRLDPVSKTWVDADDSGDAAVRAAARRVVFLEAHPEQACQEQGAMMKAFIRRNGAVVLKAVEEADAELAAAWERMHDNRDDVDAAHSSTTPPASTSPAAFDRAYTAYRKHIDTRASAALVANSLPPTCAASATLQLRRIGRMVDAWESANHRRVCAQRFADHFSGAAGAEKAAQEREALPKRPRESRAAANEDATAFGDVVALVVAPMLIGRASQMCECDMEAILSNAVDWVAFNGEAFEEELQRMEARLKLPPGTMAGKDGKNEGCSEGGMGRILDRCECKLERSVSSCSRLVACPIVTRRILRVPKPVCPECEDGSGVFGTDLFDLFA 943          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11057.927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6K5_ECTSI0.000e+089.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JAV0_9PHAE0.000e+088.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 610..728
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..591
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 592..609

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11057contigEcto-sp13_S_contig11057:3..3794 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11057.927.1mRNA_Ecto-sp13_S_contig11057.927.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11057 3..3794 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11057.927.1 ID=prot_Ecto-sp13_S_contig11057.927.1|Name=mRNA_Ecto-sp13_S_contig11057.927.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=729bp
SEQGEDGADGQPATGGAWGEPVGHWEPVEDGAWGQRWVPGVEQGPGAGAD
AGQPNQAPVQELERAPLHGTGQGTVEEERDEPVPVPEENGRLSAENEFRL
ANAYAEAYPRELARGRAVIYGEENPHFTVQRARAQQSDQLPPLLALSYFR
QPRPASTSETEAAWLARAAEDWLATNQGEVNAVRRRDEAARSSLVEAFYS
GDDLLRHIAAEYARSALRVAAPFTSVAATDRPRAFWSRLEQYQQQQADGE
QTREPLFKWLGIVEPPPPTGDQSTWEEDDDGAVADEDAWEMPFADAEIEE
ETFEVLPPPRTLFTPWPSTRTGRVDLRPTPPSSRARRRALDPASRLLSAT
STFGTLNLRAEVELWVAGSNIRQHGLRRLMAVQERELSKAWVALWGRRRR
LDPDSKTWVDADDSGDAAVRAAARRVVFLEAHPEQACQEQGAMMKAFVRR
NGTEVSRAVEEADAELAAAWERMHDNREDVDAPYSSITPPASTCPSTFDR
AYAAYRKHIDTRASAALVTNSLLPTSAASATLQLRMMCRMADAWESANHR
RVCAQRFADHFSGAAGAERVEQEGETLPKRLRESRAAANEDAAAFGAVVA
LVVAPMLIGRASQMCKCDMGAILSNAVDWVAFNGEAFEDELQRMETRLRL
PPGTMAGKDIEDEGCSGGGMGRMLDGCECELESSVSSCRRLVACPIITRR
ILRVPEPVCPECEDGSGVFGTDLFDLFA*
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