prot_Ecto-sp13_S_contig11026.910.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig11026.910.1
Unique Name	prot_Ecto-sp13_S_contig11026.910.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	628

Homology

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BLAST of mRNA_Ecto-sp13_S_contig11026.910.1 vs. uniprot
Match: A0A6H5KHP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP2_9PHAE)

HSP 1 Score: 601 bits (1550), Expect = 4.010e-204
Identity = 436/629 (69.32%), Postives = 447/629 (71.07%), Query Frame = 0

Query:    1 MTKGRRVLVAAAFATTATWPSSTPGRSASSAWGFLAAAPRSANCLAANKRSDSCRSRLCGSWSAADAAASTRQQSKGMVYTEQCLHAIAAFKESGAYPSLDARRERGGEASFFASRLCSSSSSSSRARLLPLPSRAAGGDGRDGGLGGIGLDAESVARAREAAKKDDYDWFMEFIGVDEEAEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRRAPTSTSGRYSSTGSEYDNGFVNDIAGGPPPRRGRPPAPGRGFQPRSGGVGASGGMRRERRTSSADTAYDYDLDEEYDQEPGRGGWDYDPGLSAGIGARRRDVQVDKVRAKTKSASMRRPLEDDQHSMEAEQE--QVFAGRAVEFEPVGSKKAKALTEGLGYTEAEVACIDPDMADLAIERAIRRPASGMPRDWVAVGMPPXXXXXXXXXXXXXXXXXXYFGGGATAAAEDIGRTSRGSGDRRGVVDDGSLDLDAILGDGYDDNXXXXXXXXXXXXNRSRSTADGWRDQERRKGDXYYYDDGEGAPQIGRRGMYDREEDFVPRGRDEARGRGRREIDGGLGGPRGQSRRPRRKKKAKISPAERYERQIFGEMGGNDSKSAGNRRPLWDEDDEEDRGKLWTGVGPDGPWPT 627
            MT+GR VL+AAA ATTATWPSSTPGRS SSAWGFLAAAPRSANCL ANK                                                                     S+SS+SSRARLL LPSRA GG          GLDAESVARAREAAKKDDYDWFMEFIGVDEE    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                          GRGFQP SGGVG +G MRRERR S ADTAYDYDLDEEYDQEPGRGGWDYDPGLSAGIGARRRDVQVDKVRAK KSASMRRPLEDDQ SMEAEQE  Q FAGRA EFEPVGSKKAKALTE LGYTEAEVACIDPDMADLAIERAIRRPASGMPRDWVAVGMPPXXXXXXXXXXXXXXXXXXYFGGGAT AAED+GRTSRGS DR GVVDDGSLDLDAILGDGYD N XXXXXXXXXXX                   X      EGAPQ+GRRGM DREEDFV RGRDE RGRGRRE+DGG+GGPRGQSRRPRRKKK  ISPAERYERQIFGE+GG D K AGNRRPLWDE+DEED GKLWTGVGPDGPWPT
Sbjct:    1 MTRGRGVLLAAAVATTATWPSSTPGRSTSSAWGFLAAAPRSANCLDANK---------------------------------------------------------------------STSSTSSRARLLLLPSRATGGXXXXXXXXXXGLDAESVARAREAAKKDDYDWFMEFIGVDEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXGRGFQPLSGGVGTTGEMRRERRPSPADTAYDYDLDEEYDQEPGRGGWDYDPGLSAGIGARRRDVQVDKVRAKAKSASMRRPLEDDQQSMEAEQEIRQEFAGRAAEFEPVGSKKAKALTEDLGYTEAEVACIDPDMADLAIERAIRRPASGMPRDWVAVGMPPXXXXXXXXXXXXXXXXXXYFGGGATTAAEDVGRTSRGSSDRGGVVDDGSLDLDAILGDGYDYNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EGAPQMGRRGMDDREEDFVLRGRDEGRGRGRREMDGGVGGPRGQSRRPRRKKK-NISPAERYERQIFGELGGEDGKGAGNRRPLWDENDEEDGGKLWTGVGPDGPWPT 551

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BLAST of mRNA_Ecto-sp13_S_contig11026.910.1 vs. uniprot
Match: D7G0C6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C6_ECTSI)

HSP 1 Score: 474 bits (1219), Expect = 6.930e-159
Identity = 279/353 (79.04%), Postives = 288/353 (81.59%), Query Frame = 0

Query:  275 MRRERRTSSADTAYDYDLDEEYDQEPGRGGWDYDPGLSAGIGARRRDVQVDKVRAKTKSASMRRPLEDDQHSMEAEQEQVFAGRAVEFEPVGSKKAKALTEGLGYTEAEVACIDPDMADLAIERAIRRPASGMPRDWVAVGMPPXXXXXXXXXXXXXXXXXXYFGGGATAAAEDIGRTSRGSGDRRGVVDDGSLDLDAILGDGYDDNXXXXXXXXXXXXNRSRSTADGWRDQERRKGDXYYYDDGEGAPQIGRRGMYDREEDFVPRGRDEARGRGRREIDGGLGGPRGQSRRPRRKKKAKISPAERYERQIFGEMGGNDSKSAGNRRPLWDEDDEEDRGKLWTGVGPDGPWPT 627
            MRRERRTSSADTAYDYDLDEEYDQEPGRGGWDYDPGLSAGIGARRRDVQVDKVRAKTKSASMRRPLEDDQ SMEAEQEQ FAGRAVEFEPVGSKKAKAL E LGYTEAEVACIDPDMADLAIERAIRRPASGMPRDWVAVGMP XXXXXXXXXXXXXXXXXX         AED+ RTSRGSGDR GVVDDGSLDLDAILGDGYD N          XX                   X        AP +GR GMYDREED  PRGRDE RGRGRRE+DGG+GGPRGQS+RPRRK++ +ISPAERYERQIFGE+GG D K AGNRR LWDEDDEED GKLWTGVGPDGPWPT
Sbjct:    1 MRRERRTSSADTAYDYDLDEEYDQEPGRGGWDYDPGLSAGIGARRRDVQVDKVRAKTKSASMRRPLEDDQQSMEAEQEQEFAGRAVEFEPVGSKKAKALIEDLGYTEAEVACIDPDMADLAIERAIRRPASGMPRDWVAVGMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEDVVRTSRGSGDRGGVVDDGSLDLDAILGDGYDYNGVGGRRRKGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPHLGRGGMYDREEDLFPRGRDEGRGRGRREMDGGVGGPRGQSKRPRRKERTEISPAERYERQIFGELGGEDGKGAGNRRALWDEDDEEDEGKLWTGVGPDGPWPT 353

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig11026.910.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig11026.910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KHP2_9PHAE	4.010e-204	69.32	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G0C6_ECTSI	6.930e-159	79.04	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..36
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..36
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 37..627

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig11026	contig	Ecto-sp13_S_contig11026:329..3384 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig11026.910.1	mRNA_Ecto-sp13_S_contig11026.910.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig11026 329..3384 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig11026.910.1 ID=prot_Ecto-sp13_S_contig11026.910.1|Name=mRNA_Ecto-sp13_S_contig11026.910.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=628bp
MTKGRRVLVAAAFATTATWPSSTPGRSASSAWGFLAAAPRSANCLAANKR
SDSCRSRLCGSWSAADAAASTRQQSKGMVYTEQCLHAIAAFKESGAYPSL
DARRERGGEASFFASRLCSSSSSSSRARLLPLPSRAAGGDGRDGGLGGIG
LDAESVARAREAAKKDDYDWFMEFIGVDEEAEDGGSKSGGEDNSSGKASD
RSSSNNGGGVVGGASSGTRRAPTSTSGRYSSTGSEYDNGFVNDIAGGPPP
RRGRPPAPGRGFQPRSGGVGASGGMRRERRTSSADTAYDYDLDEEYDQEP
GRGGWDYDPGLSAGIGARRRDVQVDKVRAKTKSASMRRPLEDDQHSMEAE
QEQVFAGRAVEFEPVGSKKAKALTEGLGYTEAEVACIDPDMADLAIERAI
RRPASGMPRDWVAVGMPPPPPPIPTSTASAPSSSQTYFGGGATAAAEDIG
RTSRGSGDRRGVVDDGSLDLDAILGDGYDDNGGGGRRRKGTRRNRSRSTA
DGWRDQERRKGDDYYYDDGEGAPQIGRRGMYDREEDFVPRGRDEARGRGR
REIDGGLGGPRGQSRRPRRKKKAKISPAERYERQIFGEMGGNDSKSAGNR
RPLWDEDDEEDRGKLWTGVGPDGPWPT*