prot_Ecto-sp13_S_contig10062.85.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig10062.85.1
Unique Name	prot_Ecto-sp13_S_contig10062.85.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	658

Homology

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BLAST of mRNA_Ecto-sp13_S_contig10062.85.1 vs. uniprot
Match: A0A6H5KAJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAJ9_9PHAE)

HSP 1 Score: 607 bits (1564), Expect = 1.200e-202
Identity = 470/520 (90.38%), Postives = 476/520 (91.54%), Query Frame = 0

Query:    1 MGQERAQGGTPSPAGVDGGGSXXXXXXXXXXXXLVPEEESEPELLGTTGTMRWVVVGLIAALGSALLICLCMLTVCRRRKGRXERALXXXXXXXXXXXXXXXXXXMVGPRPLSTSAAADDTAERGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRRTVAGAADLSSSSAMRPSGTESSRSGSRRPXXXXXXXXXXXXXXXXXXEGGGGRDPRRETVDSAVAVVNVETPLSSELRERELARQRSVELNAAREEEGWMSPALVSAWGEGTVIGGNGHVALSARNTPTKRGFAALPDDATAGEERRGXXXXXXXXXXXXXXXXXXXXXXXXXTKRNHSSAEAAEAAAVSVSVPSGMKGRKSRSAGKSRSGARPFGGGRESDEDQDSEAPAPSRGMKDRRSKSADKAIGHAFAPQDGSALLSERRGSRSGPRAHGSGSLTASGNPRKIKPPATGGGDSGRFTPPRETSTDRALARAVKTPAGGARLPISVAAAAGGASVGPPRGLG 520
            MGQERAQGGTPSPAGVDG  SXXXXXXXXXXXX VPEEESEPELLGTTGTMRWVVVGLIAALGSALLICLCMLTVCRRRKGR ERAL     XXXXXXXXXX   MVGPRPLSTSAAADDTAERGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRRTVAGAADLSSSS+ RPSGTESSRS SR  XXXXXXXXXXXXXXXX  EGGGGRDPRRETVDSAVAVVNVETPLSSELRERELARQRSVELNAAREEEGWMSP LVSAWGEG V+GG GHVALSARNTPTKRGFAALP+DATAGEERRG XXXXXXXXXXXXXXXXXXXXXXXX                SVSVP GMKGRKSRSAG+SRSGARPFGGGRESDED+DSEAPAPSRGMKDRRSKSADKAI HAFAPQDGS LLSERR SRS PRA+GSG LTASGNPRKIKPPATGGGDSGRFTPPRETSTDRALARAVKTPAGGARLPISVAAAAGGASVGPPRGLG
Sbjct:  527 MGQERAQGGTPSPAGVDG--SXXXXXXXXXXXXXVPEEESEPELLGTTGTMRWVVVGLIAALGSALLICLCMLTVCRRRKGRGERALEMADGXXXXXXXXXXTSAMVGPRPLSTSAAADDTAERGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRRTVAGAADLSSSSSRRPSGTESSRSVSRXXXXXXXXXXXXXXXXXXNGEGGGGRDPRRETVDSAVAVVNVETPLSSELRERELARQRSVELNAAREEEGWMSPPLVSAWGEGAVVGGKGHVALSARNTPTKRGFAALPEDATAGEERRGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVSVPRGMKGRKSRSAGRSRSGARPFGGGRESDEDEDSEAPAPSRGMKDRRSKSADKAIRHAFAPQDGSTLLSERRESRSSPRAYGSGGLTASGNPRKIKPPATGGGDSGRFTPPRETSTDRALARAVKTPAGGARLPISVAAAAGGASVGPPRGLG 1044

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BLAST of mRNA_Ecto-sp13_S_contig10062.85.1 vs. uniprot
Match: D7G311_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G311_ECTSI)

HSP 1 Score: 555 bits (1429), Expect = 1.340e-181
Identity = 450/557 (80.79%), Postives = 458/557 (82.23%), Query Frame = 0

Query:    1 MGQERAQGGTPSPAGVDGGGSXXXXXXXXXXXXLVPEEESEPELLGTTGTMRWVVVGLIAALGSALLICLCMLTVCRRRKGRXERALXXXXXXXXXXXXXXXXXXMVGPRPLSTSAAADDTAERGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRRTVAGAADLSSSSAMRPSGTESSRSGSRRPXXXXXXXXXXXXXXXXXXEGGGGRDPRRETVDSAVAVVNVETPLSSELRERELARQRSVELNAAREEEGWMSPALVSAWGEGTVIGGNGHVALSARNTPTKRGFAALPDDATAGEERRGXXXXXXXXXXXXXXXXXXXXXXXXXT-KRNHSSAEAAEAAAVSVSVPSGMKGRKSRSAGKSRSGARPFGGGRESDEDQDSEAPAPSRGMKDRRSKSADKAIGHAFAPQDGSALLSERRGSRSGPRAHGSGSLTASGNPRKIKPPATGGG-DSGRFTPPRETSTDRALARAVKTPAGGARLPISVAAAAGGASVGPPRGLGSTTXXXXXXDAAGVAAELGRRQRGSEAAAVISAEV 555
            MGQERAQGGTPSPAGVDG  SXXXXXXXXXXXX  PEEESEP+LLGTTGTMR                          RKGR ERAL    XXXXXXXXXXXXXX VGPR     AAADDTAERGL      XXXXXXXXXXXXXXXX          XXXXXXXXXX  GSRR VAGAAD SSSS+ RPSGT SSR      XXXX   XXXXXXXXXXXE GGGRDPRRETVDSAVAVVNVETPLSSELRE ELARQRSVEL AAREEEGWMSP LVSAWGEG V+GGNGHVALSARNTPTKRGFA LPDDATAGEERRGXXXXXXXXXXXXXXXXXXXXXX     KRNHSSAEAAEAAAVSVSVP GMKGRKSRSAGKSRSGARPFGGGRE DED+DSE PAPSRGMKDRRSKSADKAIGHAFAPQDGSALL ERRGSRSGPRA+GSG LTA+GNPRKIKPPATGGG DS RFTP RETST RALARAVKTPAGGARLPISVAAAAGGASVGPPRG GST+XXXXXX     AAELGRRQRG EAAAV+SAEV
Sbjct:  550 MGQERAQGGTPSPAGVDG--SXXXXXXXXXXXXXXPEEESEPDLLGTTGTMR--------------------------RKGRGERALELAGXXXXXXXXXXXXXX-VGPRXXXXXAAADDTAERGLRGTNNGXXXXXXXXXXXXXXXXWATSPGTSAAXXXXXXXXXXRSGSRRAVAGAADPSSSSSRRPSGTGSSRXXXXXXXXXXDLSXXXXXXXXXXXEDGGGRDPRRETVDSAVAVVNVETPLSSELRELELARQRSVELKAAREEEGWMSPPLVSAWGEGAVVGGNGHVALSARNTPTKRGFAVLPDDATAGEERRGXXXXXXXXXXXXXXXXXXXXXXPSERPKRNHSSAEAAEAAAVSVSVPRGMKGRKSRSAGKSRSGARPFGGGREDDEDEDSEVPAPSRGMKDRRSKSADKAIGHAFAPQDGSALLPERRGSRSGPRAYGSGGLTANGNPRKIKPPATGGGGDSDRFTPSRETSTGRALARAVKTPAGGARLPISVAAAAGGASVGPPRGFGSTSXXXXXXXXXXXAAELGRRQRGGEAAAVVSAEV 1077

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig10062.85.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig10062.85.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KAJ9_9PHAE	1.200e-202	90.38	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G311_ECTSI	1.340e-181	80.79	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..52
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 76..657
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 53..75
None	No IPR available	TMHMM	TMhelix		coord: 53..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig10062	contig	Ecto-sp13_S_contig10062:489..2462 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig10062.85.1	mRNA_Ecto-sp13_S_contig10062.85.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig10062 39..4786 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig10062.85.1 ID=prot_Ecto-sp13_S_contig10062.85.1|Name=mRNA_Ecto-sp13_S_contig10062.85.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=658bp
MGQERAQGGTPSPAGVDGGGSSGSSSGAGSGLGLVPEEESEPELLGTTGT
MRWVVVGLIAALGSALLICLCMLTVCRRRKGRGERALELARGGGGGDAEE
GSTSAMVGPRPLSTSAAADDTAERGLGVTSNGHGDGGGSSKSQHEFWATS
PGTSAAVNVNGEQSQSRSRSGSRRTVAGAADLSSSSAMRPSGTESSRSGS
RRPSGAGDLSRSSSRRPSGREEGGGGRDPRRETVDSAVAVVNVETPLSSE
LRERELARQRSVELNAAREEEGWMSPALVSAWGEGTVIGGNGHVALSARN
TPTKRGFAALPDDATAGEERRGRRGSRKAAAAAAASRRGGESSSSERTKR
NHSSAEAAEAAAVSVSVPSGMKGRKSRSAGKSRSGARPFGGGRESDEDQD
SEAPAPSRGMKDRRSKSADKAIGHAFAPQDGSALLSERRGSRSGPRAHGS
GSLTASGNPRKIKPPATGGGDSGRFTPPRETSTDRALARAVKTPAGGARL
PISVAAAAGGASVGPPRGLGSTTTAAAAADAAGVAAELGRRQRGSEAAAV
ISAEVNPFYSRGGESSIRSGGGSRSPKSNGSRSHSRVSSRSPRGERSWGG
RSRSRSSSRRGDERVAAGGGGDGGGWAAEMYRVSPGPQSAKIYSRKFGSS
QPGGGEE*