mRNA_Ecto-sp13_S_contig1092.820.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1092.820.1 vs. uniprot
Match: D7G001_ECTSI (Coiled-coil flagellar protein, move backward only 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G001_ECTSI) HSP 1 Score: 197 bits (502), Expect = 8.450e-62 Identity = 97/99 (97.98%), Postives = 97/99 (97.98%), Query Frame = 3
Query: 3 RAEHGEPPTEAAVWDLYRLEQKSVAASTQRLERAEAETSGEAPIPPSMVRTTAEPRPNAYIPDELGIPKPYGGQGPFKPTEGGTTMRHIRKPKPREIEI 299
RAEHGEPPTEAAVWDLYRLEQKSVAASTQRLERAEAETSGEAPIPPSMVRT AEPRPNAYIPDELGIPKPYGGQGPFKPTEGGTTMRHIR PKPREIEI
Sbjct: 125 RAEHGEPPTEAAVWDLYRLEQKSVAASTQRLERAEAETSGEAPIPPSMVRTMAEPRPNAYIPDELGIPKPYGGQGPFKPTEGGTTMRHIRMPKPREIEI 223
BLAST of mRNA_Ecto-sp13_S_contig1092.820.1 vs. uniprot
Match: A0A7S2UV02_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV02_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 6.250e-23 Identity = 54/103 (52.43%), Postives = 65/103 (63.11%), Query Frame = 3
Query: 3 RAEHGEPPTEAAVWDLYRLEQKSVAASTQRLERAEAETSGEAP---IPPSMVRTTAEPRPNAYIPDE-LGIPKPYGGQGPFKPTEGGTTMRHIRKPKPREIEI 299
RAEH EPPTE A + R E++ + RL +P + RTTAEPRPNAYIPD+ LG+PKPYG PFKPTE G+TMRHIR P P++IEI
Sbjct: 33 RAEHDEPPTEEAEKEWQRSEREMLEREETRLMAENTXXXXXXXXXAMPDQVNRTTAEPRPNAYIPDDALGLPKPYGKLAPFKPTETGSTMRHIRVPNPKDIEI 135
BLAST of mRNA_Ecto-sp13_S_contig1092.820.1 vs. uniprot
Match: A0A7S3XQY0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQY0_HETAK) HSP 1 Score: 102 bits (255), Expect = 7.520e-23 Identity = 54/100 (54.00%), Postives = 69/100 (69.00%), Query Frame = 3
Query: 3 RAEHGEPPTEAAVWDLYRLEQKSVAASTQRLERAEAETSGEAPIPPSMVRTTAEPRPNAYIP-DELGIPKPYGGQGPFKPTEGGTTMRHIRKPKPREIEI 299
R EH EPP+ AA + +RLE+ + +L +A +G P P ++ RTTAEPRPNAYIP D LG+P+PYG PFKPTE G+TMRH+R P+ REIEI
Sbjct: 492 RFEHDEPPSAAAEREWHRLERHRLDREEAQLLQASQVAAG--PTPATVGRTTAEPRPNAYIPEDNLGLPRPYGAAAPFKPTEAGSTMRHVRPPREREIEI 589
BLAST of mRNA_Ecto-sp13_S_contig1092.820.1 vs. uniprot
Match: A0A7R9VC78_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VC78_9CHLO) HSP 1 Score: 102 bits (255), Expect = 8.440e-23 Identity = 55/99 (55.56%), Postives = 68/99 (68.69%), Query Frame = 3
Query: 3 RAEHGEPPTEAAVWDLYRLEQKSVAASTQRLERAEAETSGEAPIPPSMVRTTAEPRPNAYIPDELGIPKPYGGQGPFKPTEGGTTMRHIRKPKPREIEI 299
R + G PPTE A + YR+E+ + S ERAE ++ + S V+TTAEPRPNAYIP+ LGIPKPYGG PFKPT+ G TMRHIRKP+ +EI I
Sbjct: 822 RVDAGLPPTEDAEREWYRMERSRMQLSEALSERAEERALLDSKV--SDVQTTAEPRPNAYIPESLGIPKPYGGFAPFKPTDAGATMRHIRKPEIKEIVI 918
BLAST of mRNA_Ecto-sp13_S_contig1092.820.1 vs. uniprot
Match: A0A7S3HFN2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFN2_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.550e-22 Identity = 51/99 (51.52%), Postives = 66/99 (66.67%), Query Frame = 3
Query: 3 RAEHGEPPTEAAVWDLYRLEQKSVAASTQRLERAEAETSGEAPIPPSMVRTTAEPRPNAYIPDELGIPKPYGGQGPFKPTEGGTTMRHIRKPKPREIEI 299
R EHGE P+E AV DL R ++K + + L+R E + P M++T AEPRP AYIPDELGIP+PYG PFKP++ G +MRHIR P+ + IEI
Sbjct: 150 RFEHGEAPSEEAVKDLSRQDRKKIMLAELALQRQEEALLEQ---PAGMLKTAAEPRPTAYIPDELGIPRPYGNAAPFKPSDLGASMRHIRPPQIKPIEI 245
BLAST of mRNA_Ecto-sp13_S_contig1092.820.1 vs. uniprot
Match: Q8S4W6_CHLRE (Coiled-coil flagellar protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=Q8S4W6_CHLRE) HSP 1 Score: 101 bits (251), Expect = 2.920e-22 Identity = 52/99 (52.53%), Postives = 67/99 (67.68%), Query Frame = 3
Query: 3 RAEHGEPPTEAAVWDLYRLEQKSVAASTQRLERAEAETSGEAPIPPSMVRTTAEPRPNAYIPDELGIPKPYGGQGPFKPTEGGTTMRHIRKPKPREIEI 299
R E GEPPT+ A + YRLE++ ER + +A + + V++TAEPRPNAYIP++LGIPKPYG PFKP E G+TMRHIRKP P+E+ I
Sbjct: 824 RLEAGEPPTDDAEREWYRLERERHTVDAMAEERRAVAAALDARV--AEVQSTAEPRPNAYIPEQLGIPKPYGSFAPFKPQEAGSTMRHIRKPSPKEVVI 920
BLAST of mRNA_Ecto-sp13_S_contig1092.820.1 vs. uniprot
Match: A0A7S1U464_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U464_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.920e-22 Identity = 55/108 (50.93%), Postives = 71/108 (65.74%), Query Frame = 3
Query: 3 RAEHGEPPTEAAVWDLYRLEQKSVAA-STQRLERAEAETSGEAPIPPSMVRTTAEPRPNAYIPDEL--------GIPKPYGGQGPFKPTEGGTTMRHIRKPKPREIEI 299
R EHG+ PTE A LYRLE+ + A S ++++ G P +++R+TAE RPNAYIPD + GIP+PYGG PFKP E GTTMRHIR+P+P+EIEI
Sbjct: 828 RVEHGQAPTEDAERTLYRLERDRLTAKSMAMMDQSNMAIPGSMQQPNNILRSTAEARPNAYIPDGINQPARQPDGIPRPYGGFAPFKPQEAGTTMRHIRQPEPKEIEI 935
BLAST of mRNA_Ecto-sp13_S_contig1092.820.1 vs. uniprot
Match: A0A061QLY2_9CHLO (Coiled-coil flagellar move backward only 2 n=3 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QLY2_9CHLO) HSP 1 Score: 100 bits (248), Expect = 7.410e-22 Identity = 52/99 (52.53%), Postives = 68/99 (68.69%), Query Frame = 3
Query: 3 RAEHGEPPTEAAVWDLYRLEQKSVAASTQRLERAEAETSGEAPIPPSMVRTTAEPRPNAYIPDELGIPKPYGGQGPFKPTEGGTTMRHIRKPKPREIEI 299
R E GEPPTE A + +R +++ + Q L+ A E A ++V+TTAEPRPNAYIP+ LGIPKP+G PFKP E G+TMRHIRKP+P+E+ I
Sbjct: 834 RLERGEPPTEEAEREWFRKQRERF--TLQVLQEAAQEAKKVAESSGAVVQTTAEPRPNAYIPENLGIPKPFGSYAPFKPQEPGSTMRHIRKPQPKEVVI 930
BLAST of mRNA_Ecto-sp13_S_contig1092.820.1 vs. uniprot
Match: A0A2J8AHF8_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AHF8_9CHLO) HSP 1 Score: 99.4 bits (246), Expect = 1.350e-21 Identity = 51/99 (51.52%), Postives = 68/99 (68.69%), Query Frame = 3
Query: 3 RAEHGEPPTEAAVWDLYRLEQKSVAASTQRLERAEAETSGEAPIPPSMVRTTAEPRPNAYIPDELGIPKPYGGQGPFKPTEGGTTMRHIRKPKPREIEI 299
R E GEPPT A + YR+E++ + +R + +A + S V++TA+PRPNAYIP+ LGIPKPYGG PFKP E G+TMRHIRKP+P+E+ I
Sbjct: 646 RLEAGEPPTGDAEREWYRMERERKTVGSLAEDRRAISAAMDARV--SEVQSTADPRPNAYIPENLGIPKPYGGFSPFKPQEPGSTMRHIRKPQPKEVVI 742
BLAST of mRNA_Ecto-sp13_S_contig1092.820.1 vs. uniprot
Match: A0A0M0K1I6_9EUKA (Coiled coil flagellar protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K1I6_9EUKA) HSP 1 Score: 99.4 bits (246), Expect = 1.370e-21 Identity = 53/97 (54.64%), Postives = 65/97 (67.01%), Query Frame = 3
Query: 9 EHGEPPTEAAVWDLYRLEQKSVAASTQRLERAEAETSGEAPIPPSMVRTTAEPRPNAYIPDELGIPKPYGGQGPFKPTEGGTTMRHIRKPKPREIEI 299
E G PTE ++ R Q+ A +R+ A A++ + P + TTAEPRPNAYIPD++GIPKPYG PFKPTE GTTMRHIRKP PREIE+
Sbjct: 795 EQGAAPTE----EMEREWQRYEAELDRRVSDAYAKSVLQETAPAQLTHTTAEPRPNAYIPDDIGIPKPYGALAPFKPTELGTTMRHIRKPNPREIEL 887 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1092.820.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1092.820.1 >prot_Ecto-sp13_S_contig1092.820.1 ID=prot_Ecto-sp13_S_contig1092.820.1|Name=mRNA_Ecto-sp13_S_contig1092.820.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=112bp GGLSTGSHQPRRPSGTCTASSKRALQPARRGLRERRRRLPERRRYHRPWSback to top mRNA from alignment at Ecto-sp13_S_contig1092:13812..14606- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1092.820.1 ID=mRNA_Ecto-sp13_S_contig1092.820.1|Name=mRNA_Ecto-sp13_S_contig1092.820.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=795bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1092:13812..14606- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1092:13812..14606- >mRNA_Ecto-sp13_S_contig1092.820.1 ID=mRNA_Ecto-sp13_S_contig1092.820.1|Name=mRNA_Ecto-sp13_S_contig1092.820.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=336bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1092:13812..14606- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |