prot_Ecto-sp13_S_contig10906.809.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10906.809.1
Unique Nameprot_Ecto-sp13_S_contig10906.809.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length149
Homology
BLAST of mRNA_Ecto-sp13_S_contig10906.809.1 vs. uniprot
Match: A0A6H5KAS4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAS4_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 1.770e-96
Identity = 145/149 (97.32%), Postives = 147/149 (98.66%), Query Frame = 0
Query:    1 MVSATFGEKINTDRIVMDKTAREAVQELYPEACAKHPRFLDEIGHGETRTFTEEELRKRLEVAHVFVSLANLVLLSRGKNVLAEDFKYYSPGTGRLDRDSFLRLTKTLDVAFSTFRVTPTDFVVYKDGTVTYRRTFRAVHDGYLTVGDK 149
            MVSATFGEKINTDRIV+DKTAREAVQELYPEACAKHPRFLDEIGHGETRTFTEEELRKRLEVAHVFVSLANLVLLSRGKNVLAEDFKYYSPGTGRLDRDSFLRLTKTLDVAFSTFRV PT+ VVYKDGTVTYRRTFRAVHDGYLTVGDK
Sbjct:   75 MVSATFGEKINTDRIVIDKTAREAVQELYPEACAKHPRFLDEIGHGETRTFTEEELRKRLEVAHVFVSLANLVLLSRGKNVLAEDFKYYSPGTGRLDRDSFLRLTKTLDVAFSTFRVVPTELVVYKDGTVTYRRTFRAVHDGYLTVGDK 223          
BLAST of mRNA_Ecto-sp13_S_contig10906.809.1 vs. uniprot
Match: A0A835ZLQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLQ1_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.710e-23
Identity = 52/114 (45.61%), Postives = 71/114 (62.28%), Query Frame = 0
Query:   37 PRFLDEIGHGET-RTFTEEELRKRLEVAHVFVSLANLVLLSRGKNVLAEDFKYYSPGTGRLDRDSFLRLTKTLDVAFSTFRVTPTDFVVYKDGTVTYRRTFRAVHDGYLTVGDK 149
            P +     HG    +  EE L++RL VA  F  +A L+LL RG+N++A+DF Y+SP TG L+++ FL L +T D AF +    P  F VYKDG V+YR  +R   DG LT+GDK
Sbjct:  110 PAYTATATHGSAPASLDEESLKRRLMVAKTFARMAPLILLMRGENIIADDFMYFSPCTGTLNKEEFLGLLRTTDRAFPSMASFPQSFTVYKDGLVSYRTAYRTSFDGPLTIGDK 223          
BLAST of mRNA_Ecto-sp13_S_contig10906.809.1 vs. uniprot
Match: W7U8S2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U8S2_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 3.810e-8
Identity = 41/111 (36.94%), Postives = 53/111 (47.75%), Query Frame = 0
Query:   37 PRFLDEIGHGETRTFTEEELRKRLEVAHVFVSLANLVLLSRGKNVLAEDFKYYSPGTGRLDRDSFLRLTKTLDVAFSTFRVTPTDFVVYKDGTVTYRRTFRAVHDGYLTVG 147
            P FL  I      T T   L +    A  F ++A  +++SRG NVL+EDF YYS  TG LDR  +L L   ++ A    R   + F V  DGTV Y         G L +G
Sbjct:   87 PGFLSAIRPNSKSTDTGRALIR----AKAFANMAPRIIVSRGWNVLSEDFVYYSSATGPLDRAEYLGLVAIMERALPDLRQDSSRFEVGADGTVLYVSQAVGTFTGQLQIG 193          
BLAST of mRNA_Ecto-sp13_S_contig10906.809.1 vs. uniprot
Match: A0A4D9DH59_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DH59_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 2.490e-6
Identity = 32/79 (40.51%), Postives = 42/79 (53.16%), Query Frame = 0
Query:   69 LANLVLLSRGKNVLAEDFKYYSPGTGRLDRDSFLRLTKTLDVAFSTFRVTPTDFVVYKDGTVTYRRTFRAVHDGYLTVG 147
            +A  +++SRG NVL+EDF YYS  TG LDR  +L L   ++ A    R   + F V  DGTV Y         G L +G
Sbjct:    1 MAPRIIVSRGWNVLSEDFVYYSSATGPLDRAEYLGLVAIMERALPDLRQDSSRFEVGADGTVLYVSQAVGTFTGQLQIG 79          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10906.809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KAS4_9PHAE1.770e-9697.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZLQ1_9STRA2.710e-2345.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U8S2_9STRA3.810e-836.94Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9DH59_9STRA2.490e-640.51Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 61..147
e-value: 1.6E-5
score: 26.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10906contigEcto-sp13_S_contig10906:2478..5385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10906.809.1mRNA_Ecto-sp13_S_contig10906.809.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10906 2478..5385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10906.809.1 ID=prot_Ecto-sp13_S_contig10906.809.1|Name=mRNA_Ecto-sp13_S_contig10906.809.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=149bp
MVSATFGEKINTDRIVMDKTAREAVQELYPEACAKHPRFLDEIGHGETRT
FTEEELRKRLEVAHVFVSLANLVLLSRGKNVLAEDFKYYSPGTGRLDRDS
FLRLTKTLDVAFSTFRVTPTDFVVYKDGTVTYRRTFRAVHDGYLTVGDK
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