prot_Ecto-sp13_S_contig10905.807.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10905.807.1
Unique Nameprot_Ecto-sp13_S_contig10905.807.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length70
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10905.807.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 2.150e-25
Identity = 62/70 (88.57%), Postives = 65/70 (92.86%), Query Frame = 0 
Query:    1 ILEFCDGVPARHRRXXXXXXXXXXXQANMATSARWASSKRSDTLDYEQGRGLKRVASAITRYLFYDTWNL 70
            ILEFCDGVPARHRRXXXXXXXXXXX     T+A+WASSKRSDT+DYEQGRGLKRVASAITRYLFYDTWNL
Sbjct: 1041 ILEFCDGVPARHRRXXXXXXXXXXXXXXXXTAAQWASSKRSDTVDYEQGRGLKRVASAITRYLFYDTWNL 1110
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10905.807.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 2.920e-25
Identity = 52/70 (74.29%), Postives = 55/70 (78.57%), Query Frame = 0 
Query:    1 ILEFCDGVPARHRRXXXXXXXXXXXQANMATSARWASSKRSDTLDYEQGRGLKRVASAITRYLFYDTWNL 70
            ILEFCDGVPARHRR           QANMAT+ + ASSKRSD +DY QGRGLKRVASAITRYLFYDTWNL
Sbjct: 1039 ILEFCDGVPARHRRHRKNKHIKEGNQANMATAVQGASSKRSDMVDYGQGRGLKRVASAITRYLFYDTWNL 1108
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10905.807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JB40_9PHAE2.150e-2588.57Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FX79_ECTSI2.920e-2574.29Ankyrin Repeat Transient Receptor Potential Channe... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10905contigEcto-sp13_S_contig10905:576..1086 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10905.807.1mRNA_Ecto-sp13_S_contig10905.807.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10905 576..1086 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10905.807.1 ID=prot_Ecto-sp13_S_contig10905.807.1|Name=mRNA_Ecto-sp13_S_contig10905.807.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=70bp
ILEFCDGVPARHRRHRKNKHIKEGNQANMATSARWASSKRSDTLDYEQGR
GLKRVASAITRYLFYDTWNL
back to top