mRNA_Ecto-sp13_S_contig10880.790.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10880.790.1
Unique NamemRNA_Ecto-sp13_S_contig10880.790.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: D7FNL6_ECTSI (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNL6_ECTSI)

HSP 1 Score: 1048 bits (2711), Expect = 0.000e+0
Identity = 688/753 (91.37%), Postives = 694/753 (92.16%), Query Frame = 1
Query:  421 VEHSVQSNRKXXXXXXXXXXXXXXXXXXXLDLLPQNLPLEAAVGLCREAKGVGPAICTNARDQLRNGPDVTVRXXXXXXXXXXXXXFRRSALATALSTDERVELCVGARTDAPARCAGQVRDRRISPPNKXXXXXXXXXXXXXXXLASTPPSLSAEDRVALCQGAAEESPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAAPAHCAKAAFRAGADRHFAAVXXXXXXXXXXXXXXXAAPRQIPADVRVEACXXXXXXXXXXXXXASAPRELQAQPDGEAVCPLDPEANRRPRRGVDHRLAARVCRDALDDKPALCARAAPLRMSDGDVEVLCAAGGQPVGEDTADCAAAGLMIGFSVASAASLCRGATSGAPAACAGTAAHRIGEAGRLAXXXXXXXXXXXXXXNSVSGAGAPSASEVEECREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWGGKIHIDSSTVVRASVALRGSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGNDSKDGEAANVPLAAARVIVEETEHGAIIRRCRAVFSRLACPWPVKGEGTSGEWVSDVGMGTGAPHKVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTVPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQEVFELVGDAYEWMVSSSK 2679
            VEHSVQS RK                   LDLLPQNLPLEAAVG             TNARDQLRNGPD+TVRXXXXXXXXXXXXXFRRSALATALSTDERVELCVGARTDAPARCAGQVRDRRISPPNKXXXXXXXXXXXXXXXLASTPPSLSAEDRV LCQGAAEESPT   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SSAAPAHCAKAAFRAGADR  AAVXXXXXXXXXXXXXXXAAPRQIPADVRVE CXXXXXXXXXXXXXAS PRELQ QPD EAVCPLDPEA RRPRRGVDHRLAARVCRDALDDKPALCARAAPLRMSD DVEVLCAA GQP GE+TADCAAAGLMIGFS ASAASLCRGA+SGAP ACA TAAHRIGEAGRLAXXXXXXXXXXXXXXNSVSGAGAPSASEVEECREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWGGKIH DSSTVVRASVALRGSNGAVANAHGRFNTSD GVVHFSHLSFSGSGNLTLQFFIDGNDSKD  AANVPLAAARVIVEETEHGAI+RRCRAVFSRLACPWPVKGEG SGEWVSDVGMGTGAPH+VRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYV SPST PL ALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQ+VFELVGDAYEWMVSSSK
Sbjct:   12 VEHSVQSKRKPHLVVDVCKGASNVAPAECLDLLPQNLPLEAAVGXXXXXXXXXXXXXTNARDQLRNGPDITVRXXXXXXXXXXXXXFRRSALATALSTDERVELCVGARTDAPARCAGQVRDRRISPPNKXXXXXXXXXXXXXXXLASTPPSLSAEDRVGLCQGAAEESPTTPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSAAPAHCAKAAFRAGADRRLAAVXXXXXXXXXXXXXXXAAPRQIPADVRVETCXXXXXXXXXXXXXASGPRELQGQPDWEAVCPLDPEAGRRPRRGVDHRLAARVCRDALDDKPALCARAAPLRMSDSDVEVLCAADGQPGGEETADCAAAGLMIGFSGASAASLCRGASSGAPVACAETAAHRIGEAGRLAXXXXXXXXXXXXXXNSVSGAGAPSASEVEECREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWGGKIHKDSSTVVRASVALRGSNGAVANAHGRFNTSDVGVVHFSHLSFSGSGNLTLQFFIDGNDSKDVGAANVPLAAARVIVEETEHGAILRRCRAVFSRLACPWPVKGEGASGEWVSDVGMGTGAPHQVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVYSPSTEPLLALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELVGDAYEWMVSSSK 764          
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: A0A836CJW3_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJW3_9STRA)

HSP 1 Score: 193 bits (491), Expect = 6.820e-48
Identity = 128/317 (40.38%), Postives = 164/317 (51.74%), Query Frame = 1
Query: 1735 GAGAPSASEVEECREAVPRPSRLHITDLGHEGE--TLFPDQPMHATLEVWDQWGGKIHIDSSTVVRASVALRGSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGNDSKDGEAANVPLAAARVIVEETEHGAIIRRCRAVFSRLACPWPVKGEGTSGEWVSDVGMGTGAPHKVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTVPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQEVFELVGDAYEWMVSSSK 2679
            G GA +A ++E+CR A P  + + + +L H GE   L+    + A LEV DQWG  +  DS T VRAS+A RGSNGA     GR N + DGVV FSHL+FS  GNLTL+F + G            LA+A + V ET+  A  R C AV   L CP             SD      A        + A E  + V       W  + C   L   G  VA    P     +A +WY P +E L TG G+PT    A ERLG+   ASG ++RRAYYR+SL WHPDRW R+   + RAQ VFELV +AY  + + +K
Sbjct:  469 GGGA-TARQIEDCRGAAPVHTSIGVRELKHAGEGGVLYTGARVEAVLEVKDQWGRFMEWDSGTYVRASLAPRGSNGAFIGGAGRVNATVDGVVRFSHLTFSAPGNLTLRFDVGG----------AHLASALLRVVETKEAAFARACGAVVRALRCP-------------SDAAA---ARRAAAAELNAADEIFALVPPPLS--WNAIVCGGALRNQGFRVA----PGW-RRAAWVWYTPAVEALATGRGVPTPLMTALERLGLGEGASGGDVRRAYYRESLRWHPDRWARHPALAERAQAVFELVSEAYAELRAGAK 751          
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: A0A7S2SUI0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUI0_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.010e-33
Identity = 106/317 (33.44%), Postives = 152/317 (47.95%), Query Frame = 1
Query: 1756 SEVEECREAVPRPSRLHITDLGHE---GETLFPDQPMHATLEVWDQWGGKIHIDSSTVVRASVALRGSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGNDSKDGEAANVPLAAARVIV---EETEHGAIIRRCRAVFSRLACPWPVKGEGTS----GEWVSDVGMGTGAPHKVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTVPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQEVFELVGDAYEWMVSSS 2676
            S VE CR A   PS + I  +  +   G+ +F    +H TL+V DQ+G  +  D+ T+V A++    S GA+     R N S  GVV   +L FS  G   L F I GN           +   RV+V   E+   G   +  +  F++L    P     +S    G+    + +     +   PSS    EA+S+             C ++LEE G+ V      S       +WY P +E L+TG GLPT     W RLG+   AS R++R+AYYRQSL+WHPDRW  Y +H   AQ+ FE++ +AY  +VS S
Sbjct:    7 SLVEYCRTATATPSGVQILRMWWDTDRGDGIFAKSNVHITLQVLDQFGTPMLGDNETIVSATLDSTTSQGAMLEGI-RSNVSVAGVVELHYLRFSQDGEFDLHFGIGGNR----------VQMMRVVVSPHEDDRFGPTGKCGQEFFAKLNSFAPSFAVNSSQLVAGQDHDPLRVQEKVSYMTWPSS---LEAMSS-------------CSRILEEAGVRVT-----SGWGGDLWVWYRPAMEALDTGVGLPTASMDFWTRLGLSSTASARDVRKAYYRQSLVWHPDRWASYPLHRRLAQDAFEVISEAYRQLVSLS 291          
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: A0A7S2SUF7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUF7_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.940e-31
Identity = 135/436 (30.96%), Postives = 187/436 (42.89%), Query Frame = 1
Query: 1444 PALCARAAPLRMSDGDVEVLCAAGGQPVGEDTADCAAAGLMIGFSVASAASLCRGATSGAPAACAGTAAHRIGEAGRLAXXXXXXXXXXXXXXNSVSGAGAPS---------------ASEVEECREAVPRPSRLHITDLGHE---GETLFPDQPMHATLEVWDQWGGKIHIDSSTVVRASVALRGSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGNDSKDGEAANVPLAAARVIV---EETEHGAIIRRCRAVFSRLACPWPVKGEGTS----GEWVSDVGMGTGAPHKVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTVPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQEVFELVGDAYEWMVSSS 2676
            P  CA  AP   SD D+  LC     P   D A  A   L         A LC  +TS APA CA  +   +     +A               S + A  P                 S VE CR A   PS + I  +  +   G+ +F    +H TL+V DQ+G  +  D+ T+V A++    S GA+     R N S  GVV   +L FS  G   L F I GN           +   RV+V   E+   G   +  +  F++L    P     +S    G+    + +     +   PSS    EA+S+             C ++LEE G+ V      S       +WY P +E L+TG GLPT     W RLG+   AS R++R+AYYRQSL+WHPDRW  Y +H   AQ+ FE++ +AY  +VS S
Sbjct:  255 PMDCALTAPYGFSDSDIIALCRHA-DPRASDCARSAPPSLPASIR----ARLCARSTSTAPARCAVASPFSMHRP--MANAQAHKAEEPVVALCSQAAAPTPGHCASFLARQQGRELVPSLVEYCRTATATPSGVQILRMWWDTDRGDGIFAKSNVHITLQVLDQFGTPMLGDNETIVSATLDSTTSQGAMLEGI-RSNVSVAGVVELHYLRFSQDGEFDLHFGIGGNR----------VQMMRVVVSPHEDDRFGPTGKCGQEFFAKLNSFAPSFAVNSSQLVAGQDHDPLRVQEKVSYMTWPSS---LEAMSS-------------CSRILEEAGVRVT-----SGWGGDLWVWYRPAMEALDTGVGLPTASMDFWTRLGLSSTASARDVRKAYYRQSLVWHPDRWASYPLHRRLAQDAFEVISEAYRQLVSLS 651          
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: A0A5D6XN52_9STRA (J domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XN52_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 4.540e-11
Identity = 93/328 (28.35%), Postives = 143/328 (43.60%), Query Frame = 1
Query: 1741 GAPSASEVEECREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWGGKIHIDSSTVVRASVALRGSNGAVANAHGRFNTSDDGVVHF-SHLSF-SGSGNLTLQFFIDGNDS--KDGEAANVPLAA-----ARV-IVEETEHGAIIRRCRAVFSRLACPWPVKGEGTSGEWVSDVGMGTGAPHKVRPSSSVATEAVSTVSG--GAGAAWY--VMTCQQVLEENGINVAYVSSPSTVPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHS--ARAQEVFELVGDAYEWMVSSS 2676
            GA + S V ECR  VP P+ L I  + +    L P   +   L V DQ+G ++   +   +R SV    + G    A        D V+H  +H    +GS   T  FFI+  +     G AA   L +     AR+ I E+ +     RRCRA+F++L C                     GA    +P  S A + V  V       +  Y  V+ C+    E+   +  + + ST  + A+  +H     L T A +P+    AW  LG+D  A+  ++R AY+R+SL WHPD+W   +  S   RA +V+  V  AY  ++  +
Sbjct:  575 GAVTRSLVLECRAVVPVPASLEIAQVSYRCRQLVPKCRLSVQLRVHDQFGVEMQSWTGGYLRVSVTP--TEGTAPEA-------GDRVLHGPTHAPIINGSAAFTDIFFIEPGEFVVTFGPAAAPTLLSITEKVARIRIHEDAQERLRSRRCRALFAQLEC---------------------GADRTEQPGPS-ANDTVGEVFHLFELPSRHYLDVLGCEGFWLEHSGGMRVLGATSTRFVLAI--HHASYRFL-TNARVPSAGMSAWACLGLDEGANRSQIRHAYHRKSLEWHPDKWSGASTRSLQGRAAQVYARVTLAYNELLQDA 868          
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: K3WQH3_GLOUD (J domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQH3_GLOUD)

HSP 1 Score: 70.1 bits (170), Expect = 1.440e-8
Identity = 74/318 (23.27%), Postives = 134/318 (42.14%), Query Frame = 1
Query: 1762 VEECREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWG--------GKIHIDSS-TVVRASVALRGSNGA--VANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGNDSKDGEAANVPLAAARVIVEETEHGAI-IRRCRAVFSRLACPWPVKGEGTSGEWVSDVGMGTGAPHKVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTVPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRW--VRYAIHSARAQEVFELVGDAYEWMVSS 2673
            ++ECR AV  P+   I  + ++   L P+  +  +L V DQ+G        G +HI ++ T   ++     S G   V  +H       +G   F  +SF+ +G   + F      S       +     R+ + E +   +  +RC+A+F+R  C      + T+  +           H +  S+    +A+S       A W+  T        G+     +S   + +     YH       T A +P  +   W  LG+   A+  ++RRAY+R+SL WHPD+W      +  A+A++++ L+  AY  + +S
Sbjct:  404 IQECRYAVATPASTEIAQVSYQCRELIPNCLITISLRVLDQFGEEMPAWTGGYVHIAATPTTDTSNTEHMTSEGRILVGQSHALI---VNGTAVFKDISFAEAGEFIITFRPPSASSSSLIGVFLEEKIVRIRIHEDKLAQLRTKRCKALFARFQC----SRDDTADPF-----------HVLDLSNRFYLDAMS-----CEAFWHEHT-------GGLRFQGTTSQRLLYVIHRASYH-----FLTDASIPHAEMSPWACLGLASSANRSQIRRAYHRKSLEWHPDKWSSADTIMLRAQAEKIYALITHAYHVLFNS 686          
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: A0A2R5GI11_9STRA (DnaJ family protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI11_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.480e-8
Identity = 39/109 (35.78%), Postives = 61/109 (55.96%), Query Frame = 1
Query: 2335 AWYVMT--CQQVLEENGINVAYVSSPSTVPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIH-SARAQEVFELVGDA 2652
            AW+++   C+  L + G+ +  + SP  +     L    G   L  G G+PT +  A E LGV+ +A+  +LR+AYYR SL WHPDRWV +     ++A +VF+ +  A
Sbjct: 1092 AWWLLARGCEDELADIGVQL--LRSPQPIAHGVFLHIKSGPAKLLAGIGVPTEEMSAEEILGVEANATSSQLRKAYYRASLEWHPDRWVSFHPDLQSQAADVFQRIATA 1198          
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: A0A7S3MAI0_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAI0_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.670e-7
Identity = 39/135 (28.89%), Postives = 57/135 (42.22%), Query Frame = 1
Query: 2407 STVPLSALLW--YHPGIETLETGAGLPTRDQPAWERLGVDRDASG------------------------------------------RELRRAYYRQSLLWHPDRWVRYAIHSARAQEVFELVGDAYEWMVSSSK 2679
            S V +   LW  Y  G+++L TG G+P  +    ERLG+  +A G                                          +E+RRAYYR+SL WHPDRW    +++   Q  FEL+ +AY  + +  K
Sbjct:  229 SFVGVQGDLWAEYRLGVDSLWTGVGMPRLEMSPMERLGLSTNAEGLIVSDHPDNDKXXXXXXXXXXXXXXXXSNALGNTRKRERAMQKEIRRAYYRKSLQWHPDRWAGMGMYALPVQAAFELINEAYNSLTNEEK 363          
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: G4YHG0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YHG0_PHYSP)

HSP 1 Score: 60.1 bits (144), Expect = 2.190e-5
Identity = 29/65 (44.62%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 2500 WERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIH---SARAQEVFELVGDAYEWMVSSSKPR 2685
            +ERLGV RDA+ R++R AY R +L WHPDRW   + +    A A+E+F+L+ ++YE ++S ++ R
Sbjct:  453 YERLGVPRDATERQIRSAYKRLALKWHPDRWANNSTNPQEQASAEEIFKLLAESYE-VLSDAEAR 516          
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: A0A6A4FL97_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FL97_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.290e-5
Identity = 29/65 (44.62%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 2500 WERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIH---SARAQEVFELVGDAYEWMVSSSKPR 2685
            +ERLGV R+A+ R++R AY R +L WHPDRW   +I+    A A+E+F+L+ ++YE ++S ++ R
Sbjct:  455 YERLGVPRNATERQIRSAYKRLALKWHPDRWANNSINPQEQASAEEIFKLLAESYE-VLSDAEAR 518          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FNL6_ECTSI0.000e+091.37J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
A0A836CJW3_9STRA6.820e-4840.38J domain-containing protein n=1 Tax=Tribonema minu... [more]
A0A7S2SUI0_9STRA1.010e-3333.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2SUF7_9STRA1.940e-3130.96Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A5D6XN52_9STRA4.540e-1128.35J domain-containing protein n=1 Tax=Pythium brassi... [more]
K3WQH3_GLOUD1.440e-823.27J domain-containing protein n=1 Tax=Globisporangiu... [more]
A0A2R5GI11_9STRA2.480e-835.78DnaJ family protein n=1 Tax=Hondaea fermentalgiana... [more]
A0A7S3MAI0_9STRA4.670e-728.89Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
G4YHG0_PHYSP2.190e-544.62Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A6A4FL97_9STRA2.290e-544.62Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10880contigEcto-sp13_S_contig10880:34..3824 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1053.5
Seed ortholog evalue5.5e-305
Seed eggNOG ortholog2880.D7FNL6
Model size2700
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.DnaJ molecular chaperone homology domain
EggNOG OGs29M4M@1,2RUDY@2759
Ec32 ortholog descriptionDnaJ domain
Ec32 orthologEc-01_005020.1
Cds size2700
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462561.0246828-CDS-Ecto-sp13_S_contig10880:33..19691681462561.0246828-CDS-Ecto-sp13_S_contig10880:33..1969Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10880 34..1969 -
1681462561.0338464-CDS-Ecto-sp13_S_contig10880:2540..28991681462561.0338464-CDS-Ecto-sp13_S_contig10880:2540..2899Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10880 2541..2899 -
1681462561.0414574-CDS-Ecto-sp13_S_contig10880:3419..38241681462561.0414574-CDS-Ecto-sp13_S_contig10880:3419..3824Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10880 3420..3824 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10880.790.1prot_Ecto-sp13_S_contig10880.790.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10880 34..3824 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10880.790.1

>prot_Ecto-sp13_S_contig10880.790.1 ID=prot_Ecto-sp13_S_contig10880.790.1|Name=mRNA_Ecto-sp13_S_contig10880.790.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=900bp
MGSVSKQVRPSPGHKSRSSSKHSRRFCCLLVCAVVVPCSCQGSLRVAKEC
SRLAPYFLTADQRVALCGQATTTAPALCARKAHAAPRLSGYHILELCSGA
ISELPGLCVAGLSQSTARNLSPDLRVELCRGALSDAPALCVEHSVQSNRK
PHLVVNVCKGASNVAPAECLDLLPQNLPLEAAVGLCREAKGVGPAICTNA
RDQLRNGPDVTVRLCRGASGQGPADCFRRSALATALSTDERVELCVGART
DAPARCAGQVRDRRISPPNKVALCRGASGIAPATCLASTPPSLSAEDRVA
LCQGAAEESPTAPTACLKTVPQDLPSASAVALCRGAADKKAAAECAKVAR
HTVGESSDALMTLCQGASSAAPAHCAKAAFRAGADRHFAAVLCAGSTSLA
PASCFAAAPRQIPADVRVEACFGALSISPALCLAASAPRELQAQPDGEAV
CPLDPEANRRPRRGVDHRLAARVCRDALDDKPALCARAAPLRMSDGDVEV
LCAAGGQPVGEDTADCAAAGLMIGFSVASAASLCRGATSGAPAACAGTAA
HRIGEAGRLAICKGASSTAPARCANSVSGAGAPSASEVEECREAVPRPSR
LHITDLGHEGETLFPDQPMHATLEVWDQWGGKIHIDSSTVVRASVALRGS
NGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGNDSKDGEAAN
VPLAAARVIVEETEHGAIIRRCRAVFSRLACPWPVKGEGTSGEWVSDVGM
GTGAPHKVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVS
SPSTVPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRR
AYYRQSLLWHPDRWVRYAIHSARAQEVFELVGDAYEWMVSSSKPRGENN*
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mRNA from alignment at Ecto-sp13_S_contig10880:34..3824-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10880.790.1 ID=mRNA_Ecto-sp13_S_contig10880.790.1|Name=mRNA_Ecto-sp13_S_contig10880.790.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3791bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10880:34..3824- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGTCTGTGTCGAAGCAGGTACGGCCGAGTCCAGGTCACAAGAGCAG ATCGTCGTCTAAACATAGCCGACGATTCTGTTGCTTGCTGGTGTGTGCTG TTGTAGTACCATGTTCATGTCAAGGGTCGTTGCGTGTCGCCAAGGAGTGT TCTCGACTTGCGCCATACTTTCTGACTGCGGATCAGAGGGTAGCTCTGTG CGGGCAGGCCACAACGACCGCTCCGGCGCTTTGCGCAAGGAAGGCTCACG CGGCACCGCGACTGTCAGGCTATCACATCCTTGAGTTGTGCTCTGGGGCG ATCTCCGAACTTCCAGGGCTGTGCGTGGCGGGACTGTCCCAGAGTACGGC CAGGAATCTTTCTCCAGATCTCAGGGTTGAGCTTTGCAGAGGTGCTCTTT CGGATGTGAGTCTAAGTACTTCAATGCTGTGTTGATTTGTGACCGATCCC GGATTACCGTGGCGAAATGATGTACCTGCTGTATGCACACCAGAGCGCTC CAGAATCGGTGCGCGTAGGCCCCCGCCGATCAGAAACGTCAACTTCGGGT GCAGCGTCACTTTCTTGTTTCGTTGCCCCAGTCAGGCATACACATGTCAT AGGATATAGTGTAGGATGCATCGCTGACTCAATTGTTATGTCACGTGTTT TTCTCGTGAAAACTTTGGTATTAAAAACCTATCCTTTGTTTTTGTGACTC AAAGGTAGACGGCTCTCTGTGCGCGGTCTGTTTGCAAGAGAGATGCAGCA ATCGGCTTGACAGCGCTACATAACGCGGTCATGACCATGTCAGAACGGAC CCGCAGTCCCGCAGTTCATTCGGCGTTTCTTATCTCCGGGACCGTCCTGT GTGCCACCTACATTCATCGGCCGTTGACGCCTTCTCTCACAACTATTCCC GCCGCTCATGTCCACTTCCTCTCAGGCACCGGCGCTGTGTGTAGAGCACT CTGTTCAATCCAACCGAAAACCCCATCTGGTGGTGAACGTGTGCAAAGGA GCGTCGAACGTAGCGCCCGCCGAGTGCCTCGATTTGTTACCCCAGAACCT TCCTCTTGAAGCAGCGGTTGGCCTTTGCCGCGAAGCTAAAGGCGTAGGGC CAGCCATTTGTACCAATGCTAGAGACCAACTTAGAAATGGACCAGACGTC ACGGTGAGGTTGTGCCGGGGTGCCAGCGGTCAAGGCCCGGCGGACTGTTT TCGTCGGTCCGCCCTCGCTACAGCGCTCTCGACAGATGAACGTGTGGAAT TGTGTGTAGGAGCGAGAACGGATGCTCCGGCAAGGTGCGATGTTACAGAT GTATGCGGATGCCAAGCATTGGAAACGTGAGGTTCATGCATATACCTACA ACGCTGGTATCTCGACCACGGTCGGAAGTCGGAACACCACTATGTTTGGC TTTTCGCAGGCACTTATTGGCATGCAGGATCCTGTTCGACACATCACCCA ACCTACCATGTTCGTGACGTCTCTCATTGCCTACCTCTTACGAAAGGACA CATGTCTGCTCTCTGTAATTGACGAAAACTATGGCAACCTTGGAATCCTA CAGCCACATCGTCCCGACGTCACCCGTAGCGTCGATGAAGCTGTTAGCGA CTCTGCGTTGTAGATACCCAGTGTTGTCCGTATCCCGTTCAAGACGGTAA ATTTAGTCCTTGTCATCGACCGTCTGCACACAACCTGTTTGCCACGAAGC TGTTCTCGCTCCTCTGATTGTCACTCATAAGATTCTGTAACAACCCCAAC AGGTGTACTCCGTCTTTCGTGGACAATTCAGCTAAGCGTCCTCATGTACC ACCTTCGAAGAACTTTTGCTTGCTCTTTGCACTGATCAACTCACCCGGTT CCCAGATGCGCTGGACAAGTACGAGATCGTCGCATCAGCCCCCCAAACAA GGTAGCACTGTGTCGTGGAGCTTCTGGTATTGCTCCTGCGACCTGTCTTG CATCCACCCCCCCTTCACTATCTGCGGAAGACCGCGTGGCTCTGTGCCAG GGTGCCGCCGAGGAGAGCCCGACCGCTCCAACCGCTTGCCTGAAAACAGT GCCGCAGGACCTTCCGTCGGCCTCTGCGGTTGCACTTTGCCGTGGGGCCG CCGACAAGAAGGCCGCCGCAGAGTGTGCGAAGGTGGCCCGCCACACCGTC GGAGAATCTTCCGACGCGCTAATGACACTGTGTCAGGGCGCATCATCCGC GGCCCCCGCTCACTGCGCGAAGGCGGCCTTCCGGGCAGGCGCCGACCGAC ACTTCGCCGCTGTGCTGTGCGCCGGATCGACGTCGCTAGCGCCGGCGTCT TGCTTTGCGGCCGCGCCCCGCCAAATCCCGGCGGATGTCCGAGTTGAGGC ATGTTTCGGCGCGCTGTCTATCAGTCCCGCGCTCTGCCTCGCGGCCTCCG CGCCTCGCGAGCTTCAAGCACAGCCGGATGGGGAGGCCGTATGCCCACTA GACCCTGAGGCTAACAGACGTCCTCGGAGAGGGGTTGACCACCGATTAGC TGCTCGTGTATGTCGGGACGCATTGGACGACAAACCGGCGTTATGCGCAC GAGCGGCGCCGCTCCGAATGAGTGACGGTGATGTGGAGGTCCTCTGTGCG GCCGGCGGGCAGCCCGTCGGAGAAGACACCGCAGATTGCGCAGCAGCCGG TCTGATGATCGGGTTCAGCGTCGCCAGTGCCGCCTCTCTCTGCCGCGGGG CAACCTCGGGAGCGCCTGCCGCCTGCGCCGGGACGGCGGCGCACCGGATA GGGGAAGCCGGACGGCTCGCGATCTGCAAGGGGGCGTCGAGCACTGCCCC CGCGCGATGTGCCAATTCCGTGTCAGGTGCGGGAGCCCCCTCCGCCTCCG AAGTTGAGGAGTGCCGTGAAGCCGTTCCTCGTCCATCGAGACTCCACATC ACAGACCTCGGCCACGAGGGCGAAACTCTGTTTCCCGACCAGCCCATGCA CGCCACACTCGAGGTCTGGGATCAATGGGGGGGTAAGATCCACATAGACA GCTCAACGGTGGTACGCGCTTCCGTCGCATTACGCGGATCCAACGGTGCC GTCGCGAATGCTCATGGGCGCTTCAACACTTCAGACGACGGCGTCGTTCA TTTCTCGCACCTGTCGTTCAGTGGGTCTGGAAACTTGACGCTTCAGTTCT TCATAGACGGCAATGACAGCAAGGATGGGGAAGCCGCGAACGTCCCCTTG GCTGCTGCACGAGTGATAGTGGAAGAGACGGAGCATGGCGCCATCATTCG CCGATGCAGGGCAGTGTTCAGCCGGCTCGCTTGTCCCTGGCCCGTGAAAG GAGAAGGAACGAGCGGTGAATGGGTGAGCGACGTGGGGATGGGAACGGGC GCGCCGCACAAGGTGCGGCCATCGTCGTCGGTTGCGACCGAGGCTGTTTC CACCGTTTCAGGGGGAGCTGGCGCGGCGTGGTACGTGATGACATGCCAGC AAGTACTGGAGGAGAACGGCATCAACGTAGCTTACGTCTCCTCCCCAAGT ACAGTGCCACTCTCGGCTTTGCTCTGGTACCACCCCGGCATCGAGACTCT GGAAACGGGCGCAGGGTTGCCGACTCGAGATCAACCTGCGTGGGAGCGGC TGGGGGTGGATCGGGACGCGAGTGGTCGCGAACTGCGACGTGCTTACTAC CGTCAGTCGCTCCTCTGGCATCCGGACCGCTGGGTGCGGTACGCCATACA CTCTGCGCGCGCTCAGGAAGTCTTCGAACTTGTAGGCGACGCTTACGAGT GGATGGTTTCTAGCTCTAAACCTCGTGGAGAGAACAACTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10880:34..3824-

>mRNA_Ecto-sp13_S_contig10880.790.1 ID=mRNA_Ecto-sp13_S_contig10880.790.1|Name=mRNA_Ecto-sp13_S_contig10880.790.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2700bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10880:34..3824- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGTCTGTGTCGAAGCAGGTACGGCCGAGTCCAGGTCACAAGAGCAG
ATCGTCGTCTAAACATAGCCGACGATTCTGTTGCTTGCTGGTGTGTGCTG
TTGTAGTACCATGTTCATGTCAAGGGTCGTTGCGTGTCGCCAAGGAGTGT
TCTCGACTTGCGCCATACTTTCTGACTGCGGATCAGAGGGTAGCTCTGTG
CGGGCAGGCCACAACGACCGCTCCGGCGCTTTGCGCAAGGAAGGCTCACG
CGGCACCGCGACTGTCAGGCTATCACATCCTTGAGTTGTGCTCTGGGGCG
ATCTCCGAACTTCCAGGGCTGTGCGTGGCGGGACTGTCCCAGAGTACGGC
CAGGAATCTTTCTCCAGATCTCAGGGTTGAGCTTTGCAGAGGTGCTCTTT
CGGATGCACCGGCGCTGTGTGTAGAGCACTCTGTTCAATCCAACCGAAAA
CCCCATCTGGTGGTGAACGTGTGCAAAGGAGCGTCGAACGTAGCGCCCGC
CGAGTGCCTCGATTTGTTACCCCAGAACCTTCCTCTTGAAGCAGCGGTTG
GCCTTTGCCGCGAAGCTAAAGGCGTAGGGCCAGCCATTTGTACCAATGCT
AGAGACCAACTTAGAAATGGACCAGACGTCACGGTGAGGTTGTGCCGGGG
TGCCAGCGGTCAAGGCCCGGCGGACTGTTTTCGTCGGTCCGCCCTCGCTA
CAGCGCTCTCGACAGATGAACGTGTGGAATTGTGTGTAGGAGCGAGAACG
GATGCTCCGGCAAGATGCGCTGGACAAGTACGAGATCGTCGCATCAGCCC
CCCAAACAAGGTAGCACTGTGTCGTGGAGCTTCTGGTATTGCTCCTGCGA
CCTGTCTTGCATCCACCCCCCCTTCACTATCTGCGGAAGACCGCGTGGCT
CTGTGCCAGGGTGCCGCCGAGGAGAGCCCGACCGCTCCAACCGCTTGCCT
GAAAACAGTGCCGCAGGACCTTCCGTCGGCCTCTGCGGTTGCACTTTGCC
GTGGGGCCGCCGACAAGAAGGCCGCCGCAGAGTGTGCGAAGGTGGCCCGC
CACACCGTCGGAGAATCTTCCGACGCGCTAATGACACTGTGTCAGGGCGC
ATCATCCGCGGCCCCCGCTCACTGCGCGAAGGCGGCCTTCCGGGCAGGCG
CCGACCGACACTTCGCCGCTGTGCTGTGCGCCGGATCGACGTCGCTAGCG
CCGGCGTCTTGCTTTGCGGCCGCGCCCCGCCAAATCCCGGCGGATGTCCG
AGTTGAGGCATGTTTCGGCGCGCTGTCTATCAGTCCCGCGCTCTGCCTCG
CGGCCTCCGCGCCTCGCGAGCTTCAAGCACAGCCGGATGGGGAGGCCGTA
TGCCCACTAGACCCTGAGGCTAACAGACGTCCTCGGAGAGGGGTTGACCA
CCGATTAGCTGCTCGTGTATGTCGGGACGCATTGGACGACAAACCGGCGT
TATGCGCACGAGCGGCGCCGCTCCGAATGAGTGACGGTGATGTGGAGGTC
CTCTGTGCGGCCGGCGGGCAGCCCGTCGGAGAAGACACCGCAGATTGCGC
AGCAGCCGGTCTGATGATCGGGTTCAGCGTCGCCAGTGCCGCCTCTCTCT
GCCGCGGGGCAACCTCGGGAGCGCCTGCCGCCTGCGCCGGGACGGCGGCG
CACCGGATAGGGGAAGCCGGACGGCTCGCGATCTGCAAGGGGGCGTCGAG
CACTGCCCCCGCGCGATGTGCCAATTCCGTGTCAGGTGCGGGAGCCCCCT
CCGCCTCCGAAGTTGAGGAGTGCCGTGAAGCCGTTCCTCGTCCATCGAGA
CTCCACATCACAGACCTCGGCCACGAGGGCGAAACTCTGTTTCCCGACCA
GCCCATGCACGCCACACTCGAGGTCTGGGATCAATGGGGGGGTAAGATCC
ACATAGACAGCTCAACGGTGGTACGCGCTTCCGTCGCATTACGCGGATCC
AACGGTGCCGTCGCGAATGCTCATGGGCGCTTCAACACTTCAGACGACGG
CGTCGTTCATTTCTCGCACCTGTCGTTCAGTGGGTCTGGAAACTTGACGC
TTCAGTTCTTCATAGACGGCAATGACAGCAAGGATGGGGAAGCCGCGAAC
GTCCCCTTGGCTGCTGCACGAGTGATAGTGGAAGAGACGGAGCATGGCGC
CATCATTCGCCGATGCAGGGCAGTGTTCAGCCGGCTCGCTTGTCCCTGGC
CCGTGAAAGGAGAAGGAACGAGCGGTGAATGGGTGAGCGACGTGGGGATG
GGAACGGGCGCGCCGCACAAGGTGCGGCCATCGTCGTCGGTTGCGACCGA
GGCTGTTTCCACCGTTTCAGGGGGAGCTGGCGCGGCGTGGTACGTGATGA
CATGCCAGCAAGTACTGGAGGAGAACGGCATCAACGTAGCTTACGTCTCC
TCCCCAAGTACAGTGCCACTCTCGGCTTTGCTCTGGTACCACCCCGGCAT
CGAGACTCTGGAAACGGGCGCAGGGTTGCCGACTCGAGATCAACCTGCGT
GGGAGCGGCTGGGGGTGGATCGGGACGCGAGTGGTCGCGAACTGCGACGT
GCTTACTACCGTCAGTCGCTCCTCTGGCATCCGGACCGCTGGGTGCGGTA
CGCCATACACTCTGCGCGCGCTCAGGAAGTCTTCGAACTTGTAGGCGACG
CTTACGAGTGGATGGTTTCTAGCTCTAAACCTCGTGGAGAGAACAACTAA
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