mRNA_Ecto-sp13_S_contig10880.790.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: D7FNL6_ECTSI (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNL6_ECTSI) HSP 1 Score: 1048 bits (2711), Expect = 0.000e+0 Identity = 688/753 (91.37%), Postives = 694/753 (92.16%), Query Frame = 1
Query: 421 VEHSVQSNRKXXXXXXXXXXXXXXXXXXXLDLLPQNLPLEAAVGLCREAKGVGPAICTNARDQLRNGPDVTVRXXXXXXXXXXXXXFRRSALATALSTDERVELCVGARTDAPARCAGQVRDRRISPPNKXXXXXXXXXXXXXXXLASTPPSLSAEDRVALCQGAAEESPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAAPAHCAKAAFRAGADRHFAAVXXXXXXXXXXXXXXXAAPRQIPADVRVEACXXXXXXXXXXXXXASAPRELQAQPDGEAVCPLDPEANRRPRRGVDHRLAARVCRDALDDKPALCARAAPLRMSDGDVEVLCAAGGQPVGEDTADCAAAGLMIGFSVASAASLCRGATSGAPAACAGTAAHRIGEAGRLAXXXXXXXXXXXXXXNSVSGAGAPSASEVEECREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWGGKIHIDSSTVVRASVALRGSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGNDSKDGEAANVPLAAARVIVEETEHGAIIRRCRAVFSRLACPWPVKGEGTSGEWVSDVGMGTGAPHKVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTVPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQEVFELVGDAYEWMVSSSK 2679
VEHSVQS RK LDLLPQNLPLEAAVG TNARDQLRNGPD+TVRXXXXXXXXXXXXXFRRSALATALSTDERVELCVGARTDAPARCAGQVRDRRISPPNKXXXXXXXXXXXXXXXLASTPPSLSAEDRV LCQGAAEESPT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SSAAPAHCAKAAFRAGADR AAVXXXXXXXXXXXXXXXAAPRQIPADVRVE CXXXXXXXXXXXXXAS PRELQ QPD EAVCPLDPEA RRPRRGVDHRLAARVCRDALDDKPALCARAAPLRMSD DVEVLCAA GQP GE+TADCAAAGLMIGFS ASAASLCRGA+SGAP ACA TAAHRIGEAGRLAXXXXXXXXXXXXXXNSVSGAGAPSASEVEECREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWGGKIH DSSTVVRASVALRGSNGAVANAHGRFNTSD GVVHFSHLSFSGSGNLTLQFFIDGNDSKD AANVPLAAARVIVEETEHGAI+RRCRAVFSRLACPWPVKGEG SGEWVSDVGMGTGAPH+VRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYV SPST PL ALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQ+VFELVGDAYEWMVSSSK
Sbjct: 12 VEHSVQSKRKPHLVVDVCKGASNVAPAECLDLLPQNLPLEAAVGXXXXXXXXXXXXXTNARDQLRNGPDITVRXXXXXXXXXXXXXFRRSALATALSTDERVELCVGARTDAPARCAGQVRDRRISPPNKXXXXXXXXXXXXXXXLASTPPSLSAEDRVGLCQGAAEESPTTPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSAAPAHCAKAAFRAGADRRLAAVXXXXXXXXXXXXXXXAAPRQIPADVRVETCXXXXXXXXXXXXXASGPRELQGQPDWEAVCPLDPEAGRRPRRGVDHRLAARVCRDALDDKPALCARAAPLRMSDSDVEVLCAADGQPGGEETADCAAAGLMIGFSGASAASLCRGASSGAPVACAETAAHRIGEAGRLAXXXXXXXXXXXXXXNSVSGAGAPSASEVEECREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWGGKIHKDSSTVVRASVALRGSNGAVANAHGRFNTSDVGVVHFSHLSFSGSGNLTLQFFIDGNDSKDVGAANVPLAAARVIVEETEHGAILRRCRAVFSRLACPWPVKGEGASGEWVSDVGMGTGAPHQVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVYSPSTEPLLALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELVGDAYEWMVSSSK 764
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: A0A836CJW3_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJW3_9STRA) HSP 1 Score: 193 bits (491), Expect = 6.820e-48 Identity = 128/317 (40.38%), Postives = 164/317 (51.74%), Query Frame = 1
Query: 1735 GAGAPSASEVEECREAVPRPSRLHITDLGHEGE--TLFPDQPMHATLEVWDQWGGKIHIDSSTVVRASVALRGSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGNDSKDGEAANVPLAAARVIVEETEHGAIIRRCRAVFSRLACPWPVKGEGTSGEWVSDVGMGTGAPHKVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTVPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQEVFELVGDAYEWMVSSSK 2679
G GA +A ++E+CR A P + + + +L H GE L+ + A LEV DQWG + DS T VRAS+A RGSNGA GR N + DGVV FSHL+FS GNLTL+F + G LA+A + V ET+ A R C AV L CP SD A + A E + V W + C L G VA P +A +WY P +E L TG G+PT A ERLG+ ASG ++RRAYYR+SL WHPDRW R+ + RAQ VFELV +AY + + +K
Sbjct: 469 GGGA-TARQIEDCRGAAPVHTSIGVRELKHAGEGGVLYTGARVEAVLEVKDQWGRFMEWDSGTYVRASLAPRGSNGAFIGGAGRVNATVDGVVRFSHLTFSAPGNLTLRFDVGG----------AHLASALLRVVETKEAAFARACGAVVRALRCP-------------SDAAA---ARRAAAAELNAADEIFALVPPPLS--WNAIVCGGALRNQGFRVA----PGW-RRAAWVWYTPAVEALATGRGVPTPLMTALERLGLGEGASGGDVRRAYYRESLRWHPDRWARHPALAERAQAVFELVSEAYAELRAGAK 751
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: A0A7S2SUI0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUI0_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.010e-33 Identity = 106/317 (33.44%), Postives = 152/317 (47.95%), Query Frame = 1
Query: 1756 SEVEECREAVPRPSRLHITDLGHE---GETLFPDQPMHATLEVWDQWGGKIHIDSSTVVRASVALRGSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGNDSKDGEAANVPLAAARVIV---EETEHGAIIRRCRAVFSRLACPWPVKGEGTS----GEWVSDVGMGTGAPHKVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTVPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQEVFELVGDAYEWMVSSS 2676
S VE CR A PS + I + + G+ +F +H TL+V DQ+G + D+ T+V A++ S GA+ R N S GVV +L FS G L F I GN + RV+V E+ G + + F++L P +S G+ + + + PSS EA+S+ C ++LEE G+ V S +WY P +E L+TG GLPT W RLG+ AS R++R+AYYRQSL+WHPDRW Y +H AQ+ FE++ +AY +VS S
Sbjct: 7 SLVEYCRTATATPSGVQILRMWWDTDRGDGIFAKSNVHITLQVLDQFGTPMLGDNETIVSATLDSTTSQGAMLEGI-RSNVSVAGVVELHYLRFSQDGEFDLHFGIGGNR----------VQMMRVVVSPHEDDRFGPTGKCGQEFFAKLNSFAPSFAVNSSQLVAGQDHDPLRVQEKVSYMTWPSS---LEAMSS-------------CSRILEEAGVRVT-----SGWGGDLWVWYRPAMEALDTGVGLPTASMDFWTRLGLSSTASARDVRKAYYRQSLVWHPDRWASYPLHRRLAQDAFEVISEAYRQLVSLS 291
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: A0A7S2SUF7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUF7_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.940e-31 Identity = 135/436 (30.96%), Postives = 187/436 (42.89%), Query Frame = 1
Query: 1444 PALCARAAPLRMSDGDVEVLCAAGGQPVGEDTADCAAAGLMIGFSVASAASLCRGATSGAPAACAGTAAHRIGEAGRLAXXXXXXXXXXXXXXNSVSGAGAPS---------------ASEVEECREAVPRPSRLHITDLGHE---GETLFPDQPMHATLEVWDQWGGKIHIDSSTVVRASVALRGSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGNDSKDGEAANVPLAAARVIV---EETEHGAIIRRCRAVFSRLACPWPVKGEGTS----GEWVSDVGMGTGAPHKVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTVPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQEVFELVGDAYEWMVSSS 2676
P CA AP SD D+ LC P D A A L A LC +TS APA CA + + +A S + A P S VE CR A PS + I + + G+ +F +H TL+V DQ+G + D+ T+V A++ S GA+ R N S GVV +L FS G L F I GN + RV+V E+ G + + F++L P +S G+ + + + PSS EA+S+ C ++LEE G+ V S +WY P +E L+TG GLPT W RLG+ AS R++R+AYYRQSL+WHPDRW Y +H AQ+ FE++ +AY +VS S
Sbjct: 255 PMDCALTAPYGFSDSDIIALCRHA-DPRASDCARSAPPSLPASIR----ARLCARSTSTAPARCAVASPFSMHRP--MANAQAHKAEEPVVALCSQAAAPTPGHCASFLARQQGRELVPSLVEYCRTATATPSGVQILRMWWDTDRGDGIFAKSNVHITLQVLDQFGTPMLGDNETIVSATLDSTTSQGAMLEGI-RSNVSVAGVVELHYLRFSQDGEFDLHFGIGGNR----------VQMMRVVVSPHEDDRFGPTGKCGQEFFAKLNSFAPSFAVNSSQLVAGQDHDPLRVQEKVSYMTWPSS---LEAMSS-------------CSRILEEAGVRVT-----SGWGGDLWVWYRPAMEALDTGVGLPTASMDFWTRLGLSSTASARDVRKAYYRQSLVWHPDRWASYPLHRRLAQDAFEVISEAYRQLVSLS 651
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: A0A5D6XN52_9STRA (J domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XN52_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 4.540e-11 Identity = 93/328 (28.35%), Postives = 143/328 (43.60%), Query Frame = 1
Query: 1741 GAPSASEVEECREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWGGKIHIDSSTVVRASVALRGSNGAVANAHGRFNTSDDGVVHF-SHLSF-SGSGNLTLQFFIDGNDS--KDGEAANVPLAA-----ARV-IVEETEHGAIIRRCRAVFSRLACPWPVKGEGTSGEWVSDVGMGTGAPHKVRPSSSVATEAVSTVSG--GAGAAWY--VMTCQQVLEENGINVAYVSSPSTVPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHS--ARAQEVFELVGDAYEWMVSSS 2676
GA + S V ECR VP P+ L I + + L P + L V DQ+G ++ + +R SV + G A D V+H +H +GS T FFI+ + G AA L + AR+ I E+ + RRCRA+F++L C GA +P S A + V V + Y V+ C+ E+ + + + ST + A+ +H L T A +P+ AW LG+D A+ ++R AY+R+SL WHPD+W + S RA +V+ V AY ++ +
Sbjct: 575 GAVTRSLVLECRAVVPVPASLEIAQVSYRCRQLVPKCRLSVQLRVHDQFGVEMQSWTGGYLRVSVTP--TEGTAPEA-------GDRVLHGPTHAPIINGSAAFTDIFFIEPGEFVVTFGPAAAPTLLSITEKVARIRIHEDAQERLRSRRCRALFAQLEC---------------------GADRTEQPGPS-ANDTVGEVFHLFELPSRHYLDVLGCEGFWLEHSGGMRVLGATSTRFVLAI--HHASYRFL-TNARVPSAGMSAWACLGLDEGANRSQIRHAYHRKSLEWHPDKWSGASTRSLQGRAAQVYARVTLAYNELLQDA 868
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: K3WQH3_GLOUD (J domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQH3_GLOUD) HSP 1 Score: 70.1 bits (170), Expect = 1.440e-8 Identity = 74/318 (23.27%), Postives = 134/318 (42.14%), Query Frame = 1
Query: 1762 VEECREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWG--------GKIHIDSS-TVVRASVALRGSNGA--VANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGNDSKDGEAANVPLAAARVIVEETEHGAI-IRRCRAVFSRLACPWPVKGEGTSGEWVSDVGMGTGAPHKVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTVPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRW--VRYAIHSARAQEVFELVGDAYEWMVSS 2673
++ECR AV P+ I + ++ L P+ + +L V DQ+G G +HI ++ T ++ S G V +H +G F +SF+ +G + F S + R+ + E + + +RC+A+F+R C + T+ + H + S+ +A+S A W+ T G+ +S + + YH T A +P + W LG+ A+ ++RRAY+R+SL WHPD+W + A+A++++ L+ AY + +S
Sbjct: 404 IQECRYAVATPASTEIAQVSYQCRELIPNCLITISLRVLDQFGEEMPAWTGGYVHIAATPTTDTSNTEHMTSEGRILVGQSHALI---VNGTAVFKDISFAEAGEFIITFRPPSASSSSLIGVFLEEKIVRIRIHEDKLAQLRTKRCKALFARFQC----SRDDTADPF-----------HVLDLSNRFYLDAMS-----CEAFWHEHT-------GGLRFQGTTSQRLLYVIHRASYH-----FLTDASIPHAEMSPWACLGLASSANRSQIRRAYHRKSLEWHPDKWSSADTIMLRAQAEKIYALITHAYHVLFNS 686
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: A0A2R5GI11_9STRA (DnaJ family protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI11_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.480e-8 Identity = 39/109 (35.78%), Postives = 61/109 (55.96%), Query Frame = 1
Query: 2335 AWYVMT--CQQVLEENGINVAYVSSPSTVPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIH-SARAQEVFELVGDA 2652
AW+++ C+ L + G+ + + SP + L G L G G+PT + A E LGV+ +A+ +LR+AYYR SL WHPDRWV + ++A +VF+ + A
Sbjct: 1092 AWWLLARGCEDELADIGVQL--LRSPQPIAHGVFLHIKSGPAKLLAGIGVPTEEMSAEEILGVEANATSSQLRKAYYRASLEWHPDRWVSFHPDLQSQAADVFQRIATA 1198
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: A0A7S3MAI0_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAI0_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 4.670e-7 Identity = 39/135 (28.89%), Postives = 57/135 (42.22%), Query Frame = 1
Query: 2407 STVPLSALLW--YHPGIETLETGAGLPTRDQPAWERLGVDRDASG------------------------------------------RELRRAYYRQSLLWHPDRWVRYAIHSARAQEVFELVGDAYEWMVSSSK 2679
S V + LW Y G+++L TG G+P + ERLG+ +A G +E+RRAYYR+SL WHPDRW +++ Q FEL+ +AY + + K
Sbjct: 229 SFVGVQGDLWAEYRLGVDSLWTGVGMPRLEMSPMERLGLSTNAEGLIVSDHPDNDKXXXXXXXXXXXXXXXXSNALGNTRKRERAMQKEIRRAYYRKSLQWHPDRWAGMGMYALPVQAAFELINEAYNSLTNEEK 363
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: G4YHG0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YHG0_PHYSP) HSP 1 Score: 60.1 bits (144), Expect = 2.190e-5 Identity = 29/65 (44.62%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 2500 WERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIH---SARAQEVFELVGDAYEWMVSSSKPR 2685
+ERLGV RDA+ R++R AY R +L WHPDRW + + A A+E+F+L+ ++YE ++S ++ R
Sbjct: 453 YERLGVPRDATERQIRSAYKRLALKWHPDRWANNSTNPQEQASAEEIFKLLAESYE-VLSDAEAR 516
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Match: A0A6A4FL97_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FL97_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.290e-5 Identity = 29/65 (44.62%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 2500 WERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIH---SARAQEVFELVGDAYEWMVSSSKPR 2685
+ERLGV R+A+ R++R AY R +L WHPDRW +I+ A A+E+F+L+ ++YE ++S ++ R
Sbjct: 455 YERLGVPRNATERQIRSAYKRLALKWHPDRWANNSINPQEQASAEEIFKLLAESYE-VLSDAEAR 518 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10880.790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10880.790.1 >prot_Ecto-sp13_S_contig10880.790.1 ID=prot_Ecto-sp13_S_contig10880.790.1|Name=mRNA_Ecto-sp13_S_contig10880.790.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=900bp MGSVSKQVRPSPGHKSRSSSKHSRRFCCLLVCAVVVPCSCQGSLRVAKECback to top mRNA from alignment at Ecto-sp13_S_contig10880:34..3824- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10880.790.1 ID=mRNA_Ecto-sp13_S_contig10880.790.1|Name=mRNA_Ecto-sp13_S_contig10880.790.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3791bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10880:34..3824- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10880:34..3824- >mRNA_Ecto-sp13_S_contig10880.790.1 ID=mRNA_Ecto-sp13_S_contig10880.790.1|Name=mRNA_Ecto-sp13_S_contig10880.790.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2700bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10880:34..3824- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |