mRNA_Ecto-sp13_S_contig10864.773.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10864.773.1 vs. uniprot
Match: A0A6H5JVD2_9PHAE (SprT-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD2_9PHAE) HSP 1 Score: 1009 bits (2608), Expect = 0.000e+0 Identity = 744/1049 (70.92%), Postives = 763/1049 (72.74%), Query Frame = 1
Query: 1 GAGGASGFPGTALEQQQQLHAAAAVGEATAIAAGDESDGDIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLAPDGDXXXXXXDSPAVSYAAAAHATAMGTDGDGGSESSSSGSDHGIRIANRGGIFRGQLGRTQMTSKRRXXXXXXXXXXXXXNVHPAEPRNVIASEPLSEEGERAKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSGVASSARLAEAADVIGRATGATSSTIEKKSRRPGRRRRVLVDEDSDGSDTGCAISRAAIAGAAATVSNEDDSPCEVTTEPVVDSHGGLHLAGPRRRKGAGAAGAGFKQRKPDDESFAQGNVPLDVDESSAGGIPDADADA-ADDDEFHASIGIVPSDSSEGAGSEKTASSDCASDGYRTVVGEDGCSSDDEGSLDAAEEWNIVPKPVTADDASSVESGRCSGGASGREAPPRNVSVGGHDNEDDDDDVVDVGRRPRGRATRGGSARRRKVWVESSVSGSSTPRSEGARGGERGFAPRGPVAVSSEAHDGETCSGGDAGRGATAAAAGTMLSRQPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVGGFSHVVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTTAGGVSSRSDHITSKRNDGHDIDGDXXXXXXXXXWSIGPSTRRPNLVRRRKVQEGPSSDEDSPRPSPAAETPAKSSRPAKPRRAEPAKDRRSWRPAEGKVRGTVRKKGRAEGGGVDSAAGGLTGAAFSRARDS--------------------------LTAMYFAEFNEGAFGGALSDVKVAWSARLSTTAGVTKSLRRVNPSGEDYAYLSTVELSTKVLDSEDKLQQTLLHELCHAAAWVVDHKSNPPHGDHFWAWANRAKAAHPGVPITTCHSYAINYKYRYTCVGASLAGGGGSGCEDEAELSGGRGCGAVIGRHSKSIDVARQVNRR 3066
G G A G GTALEQQQ LHAAAAVGEATAIAAGDESDGDIG D +APDGD DSP VS AA GSD+GIRI RGGIFRGQLGRT M SKRR XXXXXXXXXX VHPAEP +V+ASEP SEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXX IS SGVAS ARL EAADVIGRATGATSSTIEKKS SDTGCAISRAA AGAAATVS+EDDSP EVT+EPVVDSHGG HLA PRRRKGA AAGA KQRKPDDES AQG+VPL+VDESSAGGIPDADADA A DEFHASI I PSDSS+GAGS++TAS CA DGYRTVV E GCSS D GSLDAAEEWNIVP+PVTA DASSVESGRCSGGA GREAPPRN+SVGGHD+ VVDVGRRP GR RGGSARRRKV VESS SGSSTP SEGARGGERGFAPRGPV VSSE HD TCSGGDAGRGATAAAAGTM SR+ R AD+GGFS+VVE XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGGVS RSDHITSKR+DGHDID XXXXXXXX WSIG STR PNL RRRKVQEGPSSDEDS RPSPAAETPAKSSRPAK RRAEPAKDRR WRPAEGK GTVRKKGRAEGGGVDSAAGGLTGAAFSRARDS LTA YFAEFNEGAFGGALSDVKVAWSARLSTTAGVTKSLRRVNPSGEDYAYLSTVELSTKVLDSEDKLQQTLLHELCHAAAWVVDHKSNPPHG+HFW WANRAKAAHPGVPITTCHSYAINYKYRYTCVG SLAGGGGSGCE EA SGG GCGAVIGRHSKSIDVARQ RR
Sbjct: 150 GPGSARGLSGTALEQQQ-LHAAAAVGEATAIAAGDESDGDIGGGCDEERRRSVAVACPEHASSFSTALGDETIVVVAEARAAEKETGGNDSVAPDGDMTTGGGDSPVVSATAAXXXXXXXXXXXXXXXXXXXGSDYGIRIGKRGGIFRGQLGRTSMPSKRRVIXXXXXXXXXXGIVHPAEPLDVLASEPSSEEXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEISVSGVASGARLTEAADVIGRATGATSSTIEKKSSXXXXXXXXXXXXXXXXSDTGCAISRAATAGAAATVSDEDDSPREVTSEPVVDSHGGPHLAEPRRRKGARAAGAEVKQRKPDDESLAQGDVPLEVDESSAGGIPDADADADAAADEFHASIDIAPSDSSDGAGSKRTASFGCAGDGYRTVVDEAGCSSGDGGSLDAAEEWNIVPRPVTAGDASSVESGRCSGGALGREAPPRNISVGGHDDXXXXXXVVDVGRRPGGRVARGGSARRRKVLVESSESGSSTPGSEGARGGERGFAPRGPVVVSSEPHDSGTCSGGDAGRGATAAAAGTMPSRRLRRQARRVISDDDVESSDNSTQEEDVRFVSGTDRKNADIGGFSYVVESFSEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIARKEKPTAAAASSAPSEGECFHDEGEAIRPRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------AGGVSPRSDHITSKRDDGHDID--XXXXXXXXDWSIGASTRCPNLDRRRKVQEGPSSDEDSLRPSPAAETPAKSSRPAKSRRAEPAKDRRGWRPAEGKAGGTVRKKGRAEGGGVDSAAGGLTGAAFSRARDSEDATTDINLCRPVYRLHLCRKQTNPSLTAKYFAEFNEGAFGGALSDVKVAWSARLSTTAGVTKSLRRVNPSGEDYAYLSTVELSTKVLDSEDKLQQTLLHELCHAAAWVVDHKSNPPHGEHFWVWANRAKAAHPGVPITTCHSYAINYKYRYTCVGGSLAGGGGSGCEIEAGRSGGLGCGAVIGRHSKSIDVARQAQRR 1187
BLAST of mRNA_Ecto-sp13_S_contig10864.773.1 vs. uniprot
Match: D7G0U3_ECTSI (SprT-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U3_ECTSI) HSP 1 Score: 769 bits (1986), Expect = 1.960e-260 Identity = 551/716 (76.96%), Postives = 568/716 (79.33%), Query Frame = 1
Query: 913 DSPCEVTTEPVVDSHGGLHLAGPRRRKGAGAAGAGFKQRKPDDESFAQGNVPLDVDESSAGGIPDADADAADDDEFHASIGIVPSDSSEGAGSEKTASSDCASDGYRTVVGEDGCSSDDEGSLDAAEEWNIVPKPVTADDASSVESGRCSGGASGREAPPRNVSVGGHDNEDDDDDVVDVGRRPRGRATRGGSARRRKVWVESSVSGSSTPRSEGARGGERGFAPRGPVAVSSEAHDGETCSGGDAGRGATAAAAGTMLSRQPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVGGFSHVVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTTAGGVSSRSDHITSKRNDGHDIDGDXXXXXXXXXWSIGPSTRRPNLVRRRKVQEGPSSDEDSPRPSPAAETPAKSSRPAKPRRAEPAKDRRSWRPAEGKVRGTVRKKGRAEGGGVDSAAGGLTGAAFSRARDSLTAMYFAEFNEGAFGGALSDVKVAWSARLSTTAGVTKSLRRVNPSGEDYAYLSTVELSTKVLDSEDKLQQ-TLLHELCHAAAWVVDHKSNPPHGDHFWAWANRAKAAHPGVPITTCHSYAINYKYRYTCVGASLAGGGGSGCEDEAELSGGRGCGAVIGRHSKSIDVARQV 3057
DSP V + P VD HGGLHLAGPRRRKG AAGA KQRKPD+ES AQG+VPL+VDESSAGGI ADAD EFH SIGIVPSDSS+ GS++TASS CA DGYRT V EDGCSS DEGSLDAAEEWNIVP+PVTA DASSVESGRCS GASGR PPRN+SVGGHD V VESS SGSSTP SEGARG ERGFAPRGPV VSSEAHDGETCSGGDAGRG TAAAAGTM SR+PR XXXXXXXXXXXXXXXXXXXXX AD+GGFS+VVE XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RT AGGVS R D ITS R+DGHDID XXX WSIGPSTRRPNL RRRKVQEGPSSD+DSPRPSPAAETPAKSSRPAKPRR GTVRKKGRA+GGGVDSAAGGLTGAAFSRARDSLTA YFAEFNEGAFGGALSDVKVAWSARLSTTAGVTKSLRRVNPSGEDYAYLSTVELSTKVLDSEDKLQQ TLLHELCHAAAWVVDHKSNPPHG+HFWAWANRAKAAHPGVPITTCHSYAINYKYRYTCVGASLAGGGGSGC+DEA LSGGRGCGAVIGRHSKSIDVARQV
Sbjct: 256 DSP--VVSAPAVDGHGGLHLAGPRRRKGERAAGAELKQRKPDNESLAQGDVPLEVDESSAGGISGADAD-----EFHPSIGIVPSDSSDVTGSKRTASSGCAGDGYRTAVDEDGCSSGDEGSLDAAEEWNIVPRPVTAGDASSVESGRCSDGASGRGLPPRNISVGGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVESSESGSSTPGSEGARGEERGFAPRGPVVVSSEAHDGETCSGGDAGRGVTAAAAGTMPSRRPRRXXXXXXXXXXXXXXXXXXXXXVVRSVSSTGRKNADIGGFSYVVESSFEXXXXXXXXXXXXXVSEHQRPTAGIAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSS--------------RTAAGGVSPRGDKITSTRDDGHDID-----DXXXDEWSIGPSTRRPNLDRRRKVQEGPSSDKDSPRPSPAAETPAKSSRPAKPRRXXXXXXXXXXXXXXXXXXGTVRKKGRAQGGGVDSAAGGLTGAAFSRARDSLTAKYFAEFNEGAFGGALSDVKVAWSARLSTTAGVTKSLRRVNPSGEDYAYLSTVELSTKVLDSEDKLQQQTLLHELCHAAAWVVDHKSNPPHGEHFWAWANRAKAAHPGVPITTCHSYAINYKYRYTCVGASLAGGGGSGCDDEAGLSGGRGCGAVIGRHSKSIDVARQV 945
BLAST of mRNA_Ecto-sp13_S_contig10864.773.1 vs. uniprot
Match: A0A835ZFX9_9STRA (SprT-like family-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFX9_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.340e-41 Identity = 79/163 (48.47%), Postives = 101/163 (61.96%), Query Frame = 1
Query: 2569 EFNEGAFGGALSDVKVAWSARLSTTAGVTKSLRRVNPSGEDYAYLSTVELSTKVLDSEDKLQQTLLHELCHAAAWVVDHKSNPPHGDHFWAWANRAKAAHPGVPITTCHSYAINYKYRYTCVGASLAGGGGSGCEDEAELSGGRGCGAVIGRHSKSIDVARQV 3057
EF+ FGG L +V WS RLS+TAG+T+ + + + D+ Y + +ELS KVLDSE++LQ TLLHELCHAAAW+VDH PPHG F AWA RA+ +P +P+TTCHSY I YK+RY C +GC VIGRHSKS+D +
Sbjct: 1 EFDAKVFGGRLGGTQVTWSKRLSSTAGITRCSKSRSAAAADWHYEARIELSCKVLDSEERLQSTLLHELCHAAAWMVDHNVKPPHGPQFKAWARRAQRVYPHLPVTTCHSYDIAYKFRYEC----------------------QGCKTVIGRHSKSLDTDKMA 141
BLAST of mRNA_Ecto-sp13_S_contig10864.773.1 vs. uniprot
Match: A0A1Y2HBU7_9FUNG (SprT-like family-domain-containing protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HBU7_9FUNG) HSP 1 Score: 163 bits (412), Expect = 2.180e-40 Identity = 91/194 (46.91%), Postives = 110/194 (56.70%), Query Frame = 1
Query: 2512 LTGAAFSRARDSLTAMYFAEFNEGAFGGAL-SDVKVAWSARLSTTAGVT-------KSLRRVNP----SGEDYAYLSTVELSTKVLDSEDKLQQTLLHELCHAAAWVVDHKSNPPHGDHFWAWANRAKAAHPGVPITTCHSYAINYKYRYTCVGASLAGGGGSGCEDEAELSGGRGCGAVIGRHSKSIDVARQV 3057
LT AF RARDSLTA F EFN+ F L S++ + W+ RL TTAG + R V P + + + Y + VELS KVLDSE+KL++TLLHELCH AAWV+DH + PPHG FW WA RA A P + +TTCH Y IN+KY Y C CG GRHSKS+DV RQ
Sbjct: 100 LTSTAFKRARDSLTAQAFTEFNQRVFDNQLPSNLTIEWNKRLCTTAGRAWPSRFKPSTDRPVPPERKVADDGWVYDARVELSVKVLDSEEKLRRTLLHELCHVAAWVLDHVAKPPHGPRFWHWAKRATRAFPQLEVTTCHDYTINFKYTYVCTV----------------------CGYAFGRHSKSVDVQRQA 271
BLAST of mRNA_Ecto-sp13_S_contig10864.773.1 vs. uniprot
Match: A0A139AMY7_GONPJ (SprT-like domain-containing protein (Fragment) n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AMY7_GONPJ) HSP 1 Score: 152 bits (384), Expect = 8.060e-39 Identity = 78/174 (44.83%), Postives = 102/174 (58.62%), Query Frame = 1
Query: 2539 RDSLTAMYFAEFNEGAFGGAL-SDVKVAWSARLSTTAGVTKSLRRVNPSGEDYAYLSTVELSTKVLDSEDKLQQTLLHELCHAAAWVVDHKSNPPHGDHFWAWANRAKAAHPGVPITTCHSYAINYKYRYTCVGASLAGGGGSGCEDEAELSGGRGCGAVIGRHSKSIDVARQV 3057
RD LT FAEFN F L D++V WS RL+TTAG + R V D+ + + +ELSTKVLD+ +KL+ TL+HE+CHAAAWV+ H PPHG F +W +A A+P + +TTCHSY I+YK++Y C G CG + GRHSKSI+V V
Sbjct: 13 RDKLTGELFAEFNRNVFSDGLPKDMRVEWSKRLNTTAGRCYTKRCVEYVNGDWIFTARIELSTKVLDTIEKLRSTLVHEMCHAAAWVISHVDKPPHGRVFKSWGAKASRAYPAIEVTTCHSYEIDYKFKYECTG----------------------CGKIYGRHSKSINVQVHV 164
BLAST of mRNA_Ecto-sp13_S_contig10864.773.1 vs. uniprot
Match: A0A7S4D664_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D664_HETAK) HSP 1 Score: 146 bits (369), Expect = 1.650e-34 Identity = 75/178 (42.13%), Postives = 112/178 (62.92%), Query Frame = 1
Query: 2527 FSRARDSLTAMYFAEFNEGAFGGAL-SDVKVAWSARLSTTAGVTKSLRRVNPSGEDYAYLSTVELSTKVLDSEDKLQQTLLHELCHAAAWVVDHKSNPPHGDHFWAWANRAKAAHPGVPITTCHSYAINYKYRYTCVGASLAGGGGSGCEDEAELSGGRGCGAVIGRHSKSIDVARQV 3057
F++ R++L +YFA+FN+ FG L SD+++ W+ RL +TAG+TK+ R +P+G A + V+LSTK+LD++ KL+ TL+HELCHAA W++D PPHG F WA++ + +P + +TTCH Y ++YK+R++C EL C IGRH + IDV RQV
Sbjct: 148 FTKQREALAKVYFAQFNQKVFGNELPSDLEITWNKRLQSTAGLTKTKR--DPTG---ARKAQVDLSTKLLDTDSKLRSTLVHELCHAAQWLIDGSLRPPHGPGFRRWADKVEKVYPDIEVTTCHQYEVHYKFRWSCTN---------------EL-----CKRTIGRHRRCIDVKRQV 300
BLAST of mRNA_Ecto-sp13_S_contig10864.773.1 vs. uniprot
Match: A0A8J5X899_DIALT (SprT-like domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X899_DIALT) HSP 1 Score: 149 bits (377), Expect = 2.280e-34 Identity = 78/172 (45.35%), Postives = 107/172 (62.21%), Query Frame = 1
Query: 2542 DSLTAMYFAEFNEGAFGGAL-SDVKVAWSARLSTTAGVTKSLRRVNPSGEDYAYLSTVELSTKVLDSEDKLQQTLLHELCHAAAWVVDHKSNPPHGDHFWAWANRAKAAHPGVPITTCHSYAINYKYRYTCVGASLAGGGGSGCEDEAELSGGRGCGAVIGRHSKSIDVARQ 3054
DS+ A+ FA N AF G L +D+ ++WS+ L TAG+T+ G A ++++EL+ KVLD+ ++L+ TLLHELCHAAAW++D ++ PPHG HFWAWA RA AA PG ++TCHSY I+ K+R+ C G C V GRHSKS+DVA+Q
Sbjct: 214 DSVPAL-FARLNSAAFDGRLPTDLPISWSSTLRRTAGLTRFSTLRAHGGAAPARVASIELAAKVLDTPERLEATLLHELCHAAAWLLDGQARPPHGPHFWAWARRAAAALPGASVSTCHSYEIHCKHRFECTG----------------------CDQVYGRHSKSLDVAKQ 362
BLAST of mRNA_Ecto-sp13_S_contig10864.773.1 vs. uniprot
Match: A0A7S2EFK8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EFK8_9STRA) HSP 1 Score: 145 bits (367), Expect = 6.110e-34 Identity = 78/177 (44.07%), Postives = 106/177 (59.89%), Query Frame = 1
Query: 2527 FSRARDSLTAMYFAEFNEGAFGGALSDVKVAWSARLSTTAGVTKSLRRVNPS--GEDYAYLSTVELSTKVLDSEDKLQQTLLHELCHAAAWVVDHKSNPPHGDHFWAWANRAKAAHPGVPITTCHSYAINYKYRYTCVGASLAGGGGSGCEDEAELSGGRGCGAVIGRHSKSIDVAR 3051
F + RD+ T+ F FN F +L+ V V +S RLSTTAG+T+ L++++ S G ++++ELSTKV+D DK+Q TLLHE+CHAAAW+VD PPHG F WAN A PG+ +TT HSY I YKY + C+ + CGAVI RHS+S+DV +
Sbjct: 119 FLKNRDTYTSTSFHTFNTSVFSSSLTSVPVTYSKRLSTTAGITR-LKQISSSSSGGSKKRIASIELSTKVIDEYDKMQSTLLHEMCHAAAWIVDGVHKPPHGGCFKKWANLAMKKMPGISVTTTHSYEIAYKYAWACMSPN--------------------CGAVIKRHSRSVDVTK 274
BLAST of mRNA_Ecto-sp13_S_contig10864.773.1 vs. uniprot
Match: E1ZHB3_CHLVA (SprT-like domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZHB3_CHLVA) HSP 1 Score: 137 bits (345), Expect = 1.220e-33 Identity = 78/178 (43.82%), Postives = 104/178 (58.43%), Query Frame = 1
Query: 2527 FSRARDSLTAMYFAEFNEGAFGGAL-SDVKVAWSARLSTTAGVTKSLRRVNPSGEDYAYLSTVELSTKVLDSEDKLQQTLLHELCHAAAWVVDHKSNPPHGDHFWAWANRAKAAHPGVPITTCHSYAINYKYRYTCVGASLAGGGGSGCEDEAELSGGRGCGAVIGRHSKSIDVARQV 3057
+ + R+ LTA F EFN F G L + +++ W+ARL TTAG+T R + D Y + VELS+KVLD KL++TL HELCH AAW+V+H + PPHG F AWA++A + + ITTCH+Y I Y +R+ C SGC E GRHS SIDVA++V
Sbjct: 1 WKKQREELTAQLFQEFNRTVFEGQLPAGLELRWNARLLTTAGLTHYRREI----PDDPYTARVELSSKVLDGFSKLERTLCHELCHVAAWLVNHTAKPPHGPVFKAWADKAMRLYTHLDITTCHAYEIFYPFRWQCTN--------SGCLQE------------YGRHSNSIDVAKKV 154
BLAST of mRNA_Ecto-sp13_S_contig10864.773.1 vs. uniprot
Match: B7G1U1_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G1U1_PHATC) HSP 1 Score: 138 bits (348), Expect = 1.250e-33 Identity = 74/183 (40.44%), Postives = 103/183 (56.28%), Query Frame = 1
Query: 2512 LTGAAFSRARDSLTAMYFAEFNEGAFGGAL-SDVKVAWSARLSTTAGVTKSLRRVNPSGEDYAYLSTVELSTKVLDSEDKLQQTLLHELCHAAAWVVDHKSNPPHGDHFWAWANRAKAAHPGVPITTCHSYAINYKYRYTCVGASLAGGGGSGCEDEAELSGGRGCGAVIGRHSKSIDVARQV 3057
++ A F R R SL F +F+ AF L S+V ++WS +L TTAG+T+ +R+ G Y + +ELSTKV+D+ +L TL+HE+CHAAAWVVDH + PPHG F WA A ++ P + +TT H Y I YKY + C CG +I RHS+S+D +QV
Sbjct: 2 ISRATFRRIRASLAQTNFEKFDRDAFHDLLLSEVTLSWSNKLRTTAGLTR-MRKTTRQGSPTKYTAVIELSTKVIDNPFRLSSTLMHEMCHAAAWVVDHVAKPPHGKCFKKWAKHAMSSFPDIMVTTTHDYEIQYKYAWACTTPK--------------------CGVIIRRHSRSVDPFKQV 163 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10864.773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10864.773.1 >prot_Ecto-sp13_S_contig10864.773.1 ID=prot_Ecto-sp13_S_contig10864.773.1|Name=mRNA_Ecto-sp13_S_contig10864.773.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1024bp GAGGASGFPGTALEQQQQLHAAAAVGEATAIAAGDESDGDIGGGCGEERRback to top mRNA from alignment at Ecto-sp13_S_contig10864:1436..5657- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10864.773.1 ID=mRNA_Ecto-sp13_S_contig10864.773.1|Name=mRNA_Ecto-sp13_S_contig10864.773.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4222bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10864:1436..5657- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10864:1436..5657- >mRNA_Ecto-sp13_S_contig10864.773.1 ID=mRNA_Ecto-sp13_S_contig10864.773.1|Name=mRNA_Ecto-sp13_S_contig10864.773.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3072bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10864:1436..5657- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |